# Assembly name: ASM336425v1 # Organism name: Helicobacter marmotae (e-proteobacteria) # Infraspecific name: strain=MIT 98-6070 # Taxid: 152490 # BioSample: SAMN07710590 # BioProject: PRJNA412376 # Submitter: MIT # Date: 2018-08-07 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: NXLR01 # Assembly method: SPAdes v. 3.10.0 # Expected final version: no # Genome coverage: 75.84x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003364255.1 # RefSeq assembly accession: GCF_003364255.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003364275.1 GCF_003364275.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name H_marmotae_98-6070_1_28115240.2122 unplaced-scaffold na na NXLR01000001.1 = NZ_NXLR01000001.1 Primary Assembly 281152 na H_marmotae_98-6070_2_20600635.348 unplaced-scaffold na na NXLR01000002.1 = NZ_NXLR01000002.1 Primary Assembly 206006 na H_marmotae_98-6070_3_14955436.6713 unplaced-scaffold na na NXLR01000003.1 = NZ_NXLR01000003.1 Primary Assembly 149554 na H_marmotae_98-6070_4_12264139.9468 unplaced-scaffold na na NXLR01000004.1 = NZ_NXLR01000004.1 Primary Assembly 122641 na H_marmotae_98-6070_5_10446937.2967 unplaced-scaffold na na NXLR01000005.1 = NZ_NXLR01000005.1 Primary Assembly 104469 na H_marmotae_98-6070_6_8500233.168 unplaced-scaffold na na NXLR01000006.1 = NZ_NXLR01000006.1 Primary Assembly 85002 na H_marmotae_98-6070_7_8345342.654 unplaced-scaffold na na NXLR01000007.1 = NZ_NXLR01000007.1 Primary Assembly 83453 na H_marmotae_98-6070_8_8202837.6838 unplaced-scaffold na na NXLR01000008.1 = NZ_NXLR01000008.1 Primary Assembly 82028 na H_marmotae_98-6070_9_7837838.9816 unplaced-scaffold na na NXLR01000009.1 = NZ_NXLR01000009.1 Primary Assembly 78378 na H_marmotae_98-6070_10_7828135.4423 unplaced-scaffold na na NXLR01000010.1 = NZ_NXLR01000010.1 Primary Assembly 78281 na H_marmotae_98-6070_11_7794537.4082 unplaced-scaffold na na NXLR01000011.1 = NZ_NXLR01000011.1 Primary Assembly 77945 na H_marmotae_98-6070_12_5926939.3348 unplaced-scaffold na na NXLR01000012.1 = NZ_NXLR01000012.1 Primary Assembly 59269 na H_marmotae_98-6070_13_5728636.0053 unplaced-scaffold na na NXLR01000013.1 = NZ_NXLR01000013.1 Primary Assembly 57286 na H_marmotae_98-6070_14_5141437.5301 unplaced-scaffold na na NXLR01000014.1 = NZ_NXLR01000014.1 Primary Assembly 51414 na H_marmotae_98-6070_15_4330635.0945 unplaced-scaffold na na NXLR01000015.1 = NZ_NXLR01000015.1 Primary Assembly 43306 na H_marmotae_98-6070_16_4123133.3101 unplaced-scaffold na na NXLR01000016.1 = NZ_NXLR01000016.1 Primary Assembly 41231 na H_marmotae_98-6070_17_3986935.986 unplaced-scaffold na na NXLR01000017.1 = NZ_NXLR01000017.1 Primary Assembly 39869 na H_marmotae_98-6070_18_3922134.9617 unplaced-scaffold na na NXLR01000018.1 = NZ_NXLR01000018.1 Primary Assembly 39221 na H_marmotae_98-6070_19_3633744.3077 unplaced-scaffold na na NXLR01000019.1 = NZ_NXLR01000019.1 Primary Assembly 36337 na H_marmotae_98-6070_20_2758934.4868 unplaced-scaffold na na NXLR01000020.1 = NZ_NXLR01000020.1 Primary Assembly 27589 na H_marmotae_98-6070_21_2270335.9577 unplaced-scaffold na na NXLR01000021.1 = NZ_NXLR01000021.1 Primary Assembly 22703 na H_marmotae_98-6070_22_2191730.3385 unplaced-scaffold na na NXLR01000022.1 = NZ_NXLR01000022.1 Primary Assembly 21917 na H_marmotae_98-6070_23_2010635.72 unplaced-scaffold na na NXLR01000023.1 = NZ_NXLR01000023.1 Primary Assembly 20106 na H_marmotae_98-6070_24_1796837.9952 unplaced-scaffold na na NXLR01000024.1 = NZ_NXLR01000024.1 Primary Assembly 17968 na H_marmotae_98-6070_25_1673240.8561 unplaced-scaffold na na NXLR01000025.1 = NZ_NXLR01000025.1 Primary Assembly 16732 na H_marmotae_98-6070_26_1359734.981 unplaced-scaffold na na NXLR01000026.1 = NZ_NXLR01000026.1 Primary Assembly 13597 na H_marmotae_98-6070_27_889937.975 unplaced-scaffold na na NXLR01000027.1 = NZ_NXLR01000027.1 Primary Assembly 8899 na H_marmotae_98-6070_28_810435.926 unplaced-scaffold na na NXLR01000028.1 = NZ_NXLR01000028.1 Primary Assembly 8104 na H_marmotae_98-6070_29_689230.2229 unplaced-scaffold na na NXLR01000029.1 = NZ_NXLR01000029.1 Primary Assembly 6892 na H_marmotae_98-6070_30_686978.19 unplaced-scaffold na na NXLR01000030.1 = NZ_NXLR01000030.1 Primary Assembly 6869 na H_marmotae_98-6070_31_676338.0258 unplaced-scaffold na na NXLR01000031.1 = NZ_NXLR01000031.1 Primary Assembly 6763 na H_marmotae_98-6070_32_631231.5197 unplaced-scaffold na na NXLR01000032.1 = NZ_NXLR01000032.1 Primary Assembly 6312 na H_marmotae_98-6070_33_586749.3757 unplaced-scaffold na na NXLR01000033.1 = NZ_NXLR01000033.1 Primary Assembly 5867 na H_marmotae_98-6070_34_536584.9907 unplaced-scaffold na na NXLR01000034.1 = NZ_NXLR01000034.1 Primary Assembly 5365 na H_marmotae_98-6070_35_470030.5797 unplaced-scaffold na na NXLR01000035.1 = NZ_NXLR01000035.1 Primary Assembly 4700 na H_marmotae_98-6070_36_429096.4283 unplaced-scaffold na na NXLR01000036.1 = NZ_NXLR01000036.1 Primary Assembly 4290 na H_marmotae_98-6070_37_400730.6771 unplaced-scaffold na na NXLR01000037.1 = NZ_NXLR01000037.1 Primary Assembly 4007 na H_marmotae_98-6070_38_3880117.114 unplaced-scaffold na na NXLR01000038.1 = NZ_NXLR01000038.1 Primary Assembly 3880 na H_marmotae_98-6070_39_3809115.558 unplaced-scaffold na na NXLR01000039.1 = NZ_NXLR01000039.1 Primary Assembly 3809 na H_marmotae_98-6070_40_334730.6746 unplaced-scaffold na na NXLR01000040.1 = NZ_NXLR01000040.1 Primary Assembly 3347 na H_marmotae_98-6070_41_256133.2413 unplaced-scaffold na na NXLR01000041.1 = NZ_NXLR01000041.1 Primary Assembly 2561 na H_marmotae_98-6070_42_211977.3579 unplaced-scaffold na na NXLR01000042.1 = NZ_NXLR01000042.1 Primary Assembly 2119 na H_marmotae_98-6070_43_163733.117 unplaced-scaffold na na NXLR01000043.1 = NZ_NXLR01000043.1 Primary Assembly 1637 na H_marmotae_98-6070_44_1592195.813 unplaced-scaffold na na NXLR01000044.1 = NZ_NXLR01000044.1 Primary Assembly 1592 na H_marmotae_98-6070_45_155940.4699 unplaced-scaffold na na NXLR01000045.1 = NZ_NXLR01000045.1 Primary Assembly 1559 na H_marmotae_98-6070_46_154049.1235 unplaced-scaffold na na NXLR01000046.1 = NZ_NXLR01000046.1 Primary Assembly 1540 na H_marmotae_98-6070_47_126337.0455 unplaced-scaffold na na NXLR01000047.1 = NZ_NXLR01000047.1 Primary Assembly 1263 na H_marmotae_98-6070_48_83063.0041 unplaced-scaffold na na NXLR01000048.1 = NZ_NXLR01000048.1 Primary Assembly 830 na H_marmotae_98-6070_49_78798.7456 unplaced-scaffold na na NXLR01000049.1 = NZ_NXLR01000049.1 Primary Assembly 787 na H_marmotae_98-6070_50_76964.4761 unplaced-scaffold na na NXLR01000050.1 = NZ_NXLR01000050.1 Primary Assembly 769 na H_marmotae_98-6070_51_76238.6697 unplaced-scaffold na na NXLR01000051.1 = NZ_NXLR01000051.1 Primary Assembly 762 na H_marmotae_98-6070_52_68276.9554 unplaced-scaffold na na NXLR01000052.1 = NZ_NXLR01000052.1 Primary Assembly 682 na H_marmotae_98-6070_53_67396.4878 unplaced-scaffold na na NXLR01000053.1 = NZ_NXLR01000053.1 Primary Assembly 673 na H_marmotae_98-6070_54_66161.8363 unplaced-scaffold na na NXLR01000054.1 = NZ_NXLR01000054.1 Primary Assembly 661 na H_marmotae_98-6070_55_578140.553 unplaced-scaffold na na NXLR01000055.1 = NZ_NXLR01000055.1 Primary Assembly 578 na H_marmotae_98-6070_56_54719.8549 unplaced-scaffold na na NXLR01000056.1 = NZ_NXLR01000056.1 Primary Assembly 547 na H_marmotae_98-6070_60_47342.7433 unplaced-scaffold na na NXLR01000057.1 = NZ_NXLR01000057.1 Primary Assembly 473 na H_marmotae_98-6070_65_44675.4582 unplaced-scaffold na na NXLR01000058.1 = NZ_NXLR01000058.1 Primary Assembly 446 na H_marmotae_98-6070_68_4161123.32 unplaced-scaffold na na NXLR01000059.1 = NZ_NXLR01000059.1 Primary Assembly 416 na H_marmotae_98-6070_77_38511.2063 unplaced-scaffold na na NXLR01000060.1 = NZ_NXLR01000060.1 Primary Assembly 385 na H_marmotae_98-6070_83_34654.6842 unplaced-scaffold na na NXLR01000061.1 = NZ_NXLR01000061.1 Primary Assembly 346 na