# Assembly name: ASM338309v1 # Organism name: Haloferax sp. Atlit-12N (euryarchaeotes) # Infraspecific name: strain=Atlit-12N # Taxid: 2077203 # BioSample: SAMN08382977 # BioProject: PRJNA431124 # Submitter: Tel Aviv University # Date: 2018-08-13 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: PSYW01 # Assembly method: SPAdes v. 3.7.0 # Expected final version: yes # Genome coverage: 76x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_003383095.1 # RefSeq assembly accession: GCF_003383095.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003383115.1 GCF_003383115.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name P_contig000001 unplaced-scaffold na na PSYW01000001.1 = NZ_PSYW01000001.1 Primary Assembly 1554043 na P_contig000002 unplaced-scaffold na na PSYW01000002.1 = NZ_PSYW01000002.1 Primary Assembly 1233440 na P_contig000003 unplaced-scaffold na na PSYW01000003.1 = NZ_PSYW01000003.1 Primary Assembly 467917 na P_contig000004 unplaced-scaffold na na PSYW01000004.1 = NZ_PSYW01000004.1 Primary Assembly 309806 na P_contig000005 unplaced-scaffold na na PSYW01000005.1 = NZ_PSYW01000005.1 Primary Assembly 247525 na P_contig000006 unplaced-scaffold na na PSYW01000006.1 = NZ_PSYW01000006.1 Primary Assembly 54591 na P_contig000007 unplaced-scaffold na na PSYW01000007.1 = NZ_PSYW01000007.1 Primary Assembly 9054 na P_contig000008 unplaced-scaffold na na PSYW01000008.1 = NZ_PSYW01000008.1 Primary Assembly 8220 na P_contig000009 unplaced-scaffold na na PSYW01000009.1 = NZ_PSYW01000009.1 Primary Assembly 6156 na P_contig000010 unplaced-scaffold na na PSYW01000010.1 = NZ_PSYW01000010.1 Primary Assembly 5553 na P_contig000011 unplaced-scaffold na na PSYW01000011.1 = NZ_PSYW01000011.1 Primary Assembly 5541 na P_contig000013 unplaced-scaffold na na PSYW01000012.1 = NZ_PSYW01000012.1 Primary Assembly 4065 na P_contig000014 unplaced-scaffold na na PSYW01000013.1 = NZ_PSYW01000013.1 Primary Assembly 3716 na P_contig000015 unplaced-scaffold na na PSYW01000014.1 = NZ_PSYW01000014.1 Primary Assembly 3584 na P_contig000016 unplaced-scaffold na na PSYW01000015.1 = NZ_PSYW01000015.1 Primary Assembly 3528 na P_contig000017 unplaced-scaffold na na PSYW01000016.1 = NZ_PSYW01000016.1 Primary Assembly 3525 na P_contig000018 unplaced-scaffold na na PSYW01000017.1 = NZ_PSYW01000017.1 Primary Assembly 3270 na P_contig000019 unplaced-scaffold na na PSYW01000018.1 = NZ_PSYW01000018.1 Primary Assembly 3081 na P_contig000020 unplaced-scaffold na na PSYW01000019.1 = NZ_PSYW01000019.1 Primary Assembly 2658 na P_contig000021 unplaced-scaffold na na PSYW01000020.1 = NZ_PSYW01000020.1 Primary Assembly 2634 na P_contig000022 unplaced-scaffold na na PSYW01000021.1 = NZ_PSYW01000021.1 Primary Assembly 2557 na P_contig000023 unplaced-scaffold na na PSYW01000022.1 = NZ_PSYW01000022.1 Primary Assembly 2540 na P_contig000024 unplaced-scaffold na na PSYW01000023.1 = NZ_PSYW01000023.1 Primary Assembly 2537 na P_contig000025 unplaced-scaffold na na PSYW01000024.1 = NZ_PSYW01000024.1 Primary Assembly 2441 na P_contig000026 unplaced-scaffold na na PSYW01000025.1 = NZ_PSYW01000025.1 Primary Assembly 2326 na P_contig000027 unplaced-scaffold na na PSYW01000026.1 = NZ_PSYW01000026.1 Primary Assembly 2314 na P_contig000028 unplaced-scaffold na na PSYW01000027.1 = NZ_PSYW01000027.1 Primary Assembly 2311 na P_contig000029 unplaced-scaffold na na PSYW01000028.1 = NZ_PSYW01000028.1 Primary Assembly 2165 na P_contig000030 unplaced-scaffold na na PSYW01000029.1 = NZ_PSYW01000029.1 Primary Assembly 2156 na P_contig000031 unplaced-scaffold na na PSYW01000030.1 = NZ_PSYW01000030.1 Primary Assembly 2103 na P_contig000032 unplaced-scaffold na na PSYW01000031.1 = NZ_PSYW01000031.1 Primary Assembly 2074 na P_contig000033 unplaced-scaffold na na PSYW01000032.1 = NZ_PSYW01000032.1 Primary Assembly 2017 na P_contig000034 unplaced-scaffold na na PSYW01000033.1 = NZ_PSYW01000033.1 Primary Assembly 1857 na P_contig000035 unplaced-scaffold na na PSYW01000034.1 = NZ_PSYW01000034.1 Primary Assembly 1756 na P_contig000036 unplaced-scaffold na na PSYW01000035.1 = NZ_PSYW01000035.1 Primary Assembly 1681 na P_contig000037 unplaced-scaffold na na PSYW01000036.1 = NZ_PSYW01000036.1 Primary Assembly 1611 na P_contig000038 unplaced-scaffold na na PSYW01000037.1 = NZ_PSYW01000037.1 Primary Assembly 1570 na P_contig000039 unplaced-scaffold na na PSYW01000038.1 = NZ_PSYW01000038.1 Primary Assembly 1542 na P_contig000040 unplaced-scaffold na na PSYW01000039.1 = NZ_PSYW01000039.1 Primary Assembly 1508 na P_contig000041 unplaced-scaffold na na PSYW01000040.1 = NZ_PSYW01000040.1 Primary Assembly 1432 na P_contig000042 unplaced-scaffold na na PSYW01000041.1 = NZ_PSYW01000041.1 Primary Assembly 1427 na P_contig000043 unplaced-scaffold na na PSYW01000042.1 = NZ_PSYW01000042.1 Primary Assembly 1315 na P_contig000044 unplaced-scaffold na na PSYW01000043.1 = NZ_PSYW01000043.1 Primary Assembly 1210 na P_contig000045 unplaced-scaffold na na PSYW01000044.1 = NZ_PSYW01000044.1 Primary Assembly 1186 na P_contig000046 unplaced-scaffold na na PSYW01000045.1 = NZ_PSYW01000045.1 Primary Assembly 999 na P_contig000047 unplaced-scaffold na na PSYW01000046.1 = NZ_PSYW01000046.1 Primary Assembly 967 na P_contig000048 unplaced-scaffold na na PSYW01000047.1 = NZ_PSYW01000047.1 Primary Assembly 913 na P_contig000049 unplaced-scaffold na na PSYW01000048.1 = NZ_PSYW01000048.1 Primary Assembly 892 na P_contig000050 unplaced-scaffold na na PSYW01000049.1 = NZ_PSYW01000049.1 Primary Assembly 858 na P_contig000051 unplaced-scaffold na na PSYW01000050.1 = NZ_PSYW01000050.1 Primary Assembly 838 na P_contig000052 unplaced-scaffold na na PSYW01000051.1 = NZ_PSYW01000051.1 Primary Assembly 822 na P_contig000053 unplaced-scaffold na na PSYW01000052.1 = NZ_PSYW01000052.1 Primary Assembly 818 na P_contig000054 unplaced-scaffold na na PSYW01000053.1 = NZ_PSYW01000053.1 Primary Assembly 815 na P_contig000055 unplaced-scaffold na na PSYW01000054.1 = NZ_PSYW01000054.1 Primary Assembly 813 na P_contig000056 unplaced-scaffold na na PSYW01000055.1 = NZ_PSYW01000055.1 Primary Assembly 794 na P_contig000057 unplaced-scaffold na na PSYW01000056.1 = NZ_PSYW01000056.1 Primary Assembly 763 na P_contig000058 unplaced-scaffold na na PSYW01000057.1 = NZ_PSYW01000057.1 Primary Assembly 734 na P_contig000059 unplaced-scaffold na na PSYW01000058.1 = NZ_PSYW01000058.1 Primary Assembly 726 na P_contig000060 unplaced-scaffold na na PSYW01000059.1 = NZ_PSYW01000059.1 Primary Assembly 712 na P_contig000061 unplaced-scaffold na na PSYW01000060.1 = NZ_PSYW01000060.1 Primary Assembly 659 na P_contig000062 unplaced-scaffold na na PSYW01000061.1 = NZ_PSYW01000061.1 Primary Assembly 645 na P_contig000063 unplaced-scaffold na na PSYW01000062.1 = NZ_PSYW01000062.1 Primary Assembly 629 na P_contig000064 unplaced-scaffold na na PSYW01000063.1 = NZ_PSYW01000063.1 Primary Assembly 604 na P_contig000065 unplaced-scaffold na na PSYW01000064.1 = NZ_PSYW01000064.1 Primary Assembly 602 na P_contig000066 unplaced-scaffold na na PSYW01000065.1 = NZ_PSYW01000065.1 Primary Assembly 581 na P_contig000067 unplaced-scaffold na na PSYW01000066.1 = NZ_PSYW01000066.1 Primary Assembly 573 na P_contig000069 unplaced-scaffold na na PSYW01000067.1 = NZ_PSYW01000067.1 Primary Assembly 550 na P_contig000070 unplaced-scaffold na na PSYW01000068.1 = NZ_PSYW01000068.1 Primary Assembly 531 na P_contig000071 unplaced-scaffold na na PSYW01000069.1 = NZ_PSYW01000069.1 Primary Assembly 518 na P_contig000073 unplaced-scaffold na na PSYW01000070.1 = NZ_PSYW01000070.1 Primary Assembly 509 na P_contig000080 unplaced-scaffold na na PSYW01000071.1 = NZ_PSYW01000071.1 Primary Assembly 502 na P_contig000081 unplaced-scaffold na na PSYW01000072.1 = NZ_PSYW01000072.1 Primary Assembly 500 na P_contig000082 unplaced-scaffold na na PSYW01000073.1 = NZ_PSYW01000073.1 Primary Assembly 499 na P_contig000083 unplaced-scaffold na na PSYW01000074.1 = NZ_PSYW01000074.1 Primary Assembly 499 na P_contig000084 unplaced-scaffold na na PSYW01000075.1 = NZ_PSYW01000075.1 Primary Assembly 497 na P_contig000086 unplaced-scaffold na na PSYW01000076.1 = NZ_PSYW01000076.1 Primary Assembly 492 na P_contig000090 unplaced-scaffold na na PSYW01000077.1 = NZ_PSYW01000077.1 Primary Assembly 488 na P_contig000091 unplaced-scaffold na na PSYW01000078.1 = NZ_PSYW01000078.1 Primary Assembly 487 na P_contig000095 unplaced-scaffold na na PSYW01000079.1 = NZ_PSYW01000079.1 Primary Assembly 482 na P_contig000096 unplaced-scaffold na na PSYW01000080.1 = NZ_PSYW01000080.1 Primary Assembly 481 na P_contig000097 unplaced-scaffold na na PSYW01000081.1 = NZ_PSYW01000081.1 Primary Assembly 479 na P_contig000098 unplaced-scaffold na na PSYW01000082.1 = NZ_PSYW01000082.1 Primary Assembly 477 na P_contig000099 unplaced-scaffold na na PSYW01000083.1 = NZ_PSYW01000083.1 Primary Assembly 474 na P_contig000100 unplaced-scaffold na na PSYW01000084.1 = NZ_PSYW01000084.1 Primary Assembly 473 na P_contig000101 unplaced-scaffold na na PSYW01000085.1 = NZ_PSYW01000085.1 Primary Assembly 469 na P_contig000102 unplaced-scaffold na na PSYW01000086.1 = NZ_PSYW01000086.1 Primary Assembly 468 na P_contig000105 unplaced-scaffold na na PSYW01000087.1 = NZ_PSYW01000087.1 Primary Assembly 466 na P_contig000108 unplaced-scaffold na na PSYW01000088.1 = NZ_PSYW01000088.1 Primary Assembly 464 na P_contig000109 unplaced-scaffold na na PSYW01000089.1 = NZ_PSYW01000089.1 Primary Assembly 463 na P_contig000110 unplaced-scaffold na na PSYW01000090.1 = NZ_PSYW01000090.1 Primary Assembly 462 na P_contig000111 unplaced-scaffold na na PSYW01000091.1 = NZ_PSYW01000091.1 Primary Assembly 461 na P_contig000112 unplaced-scaffold na na PSYW01000092.1 = NZ_PSYW01000092.1 Primary Assembly 459 na P_contig000113 unplaced-scaffold na na PSYW01000093.1 = NZ_PSYW01000093.1 Primary Assembly 459 na P_contig000114 unplaced-scaffold na na PSYW01000094.1 = NZ_PSYW01000094.1 Primary Assembly 458 na P_contig000116 unplaced-scaffold na na PSYW01000095.1 = NZ_PSYW01000095.1 Primary Assembly 456 na P_contig000119 unplaced-scaffold na na PSYW01000096.1 = NZ_PSYW01000096.1 Primary Assembly 450 na P_contig000123 unplaced-scaffold na na PSYW01000097.1 = NZ_PSYW01000097.1 Primary Assembly 443 na P_contig000126 unplaced-scaffold na na PSYW01000098.1 = NZ_PSYW01000098.1 Primary Assembly 439 na P_contig000127 unplaced-scaffold na na PSYW01000099.1 = NZ_PSYW01000099.1 Primary Assembly 439 na P_contig000128 unplaced-scaffold na na PSYW01000100.1 = NZ_PSYW01000100.1 Primary Assembly 439 na P_contig000129 unplaced-scaffold na na PSYW01000101.1 = NZ_PSYW01000101.1 Primary Assembly 438 na P_contig000130 unplaced-scaffold na na PSYW01000102.1 = NZ_PSYW01000102.1 Primary Assembly 435 na P_contig000132 unplaced-scaffold na na PSYW01000103.1 = NZ_PSYW01000103.1 Primary Assembly 429 na P_contig000133 unplaced-scaffold na na PSYW01000104.1 = NZ_PSYW01000104.1 Primary Assembly 241 na