# Assembly name: ASM338518v1 # Organism name: Amycolatopsis palatopharyngis (high G+C Gram-positive bacteria) # Infraspecific name: strain=DSM 44832 # Taxid: 187982 # BioSample: SAMN08435654 # BioProject: PRJNA432154 # Submitter: Northumbria University # Date: 2018-08-14 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: PQHZ01 # Assembly method: SPAdes v. 3.9.0 # Expected final version: yes # Genome coverage: 181x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003385185.1 # RefSeq assembly accession: GCF_003385185.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003385205.1 GCF_003385205.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1 unplaced-scaffold na na PQHZ01000001.1 = NZ_PQHZ01000001.1 Primary Assembly 277881 na NODE_2 unplaced-scaffold na na PQHZ01000002.1 = NZ_PQHZ01000002.1 Primary Assembly 277446 na NODE_3 unplaced-scaffold na na PQHZ01000003.1 = NZ_PQHZ01000003.1 Primary Assembly 238697 na NODE_4 unplaced-scaffold na na PQHZ01000004.1 = NZ_PQHZ01000004.1 Primary Assembly 237123 na NODE_5 unplaced-scaffold na na PQHZ01000005.1 = NZ_PQHZ01000005.1 Primary Assembly 232050 na NODE_6 unplaced-scaffold na na PQHZ01000006.1 = NZ_PQHZ01000006.1 Primary Assembly 224005 na NODE_7 unplaced-scaffold na na PQHZ01000007.1 = NZ_PQHZ01000007.1 Primary Assembly 214303 na NODE_8 unplaced-scaffold na na PQHZ01000008.1 = NZ_PQHZ01000008.1 Primary Assembly 198445 na NODE_9 unplaced-scaffold na na PQHZ01000009.1 = NZ_PQHZ01000009.1 Primary Assembly 194951 na NODE_10 unplaced-scaffold na na PQHZ01000010.1 = NZ_PQHZ01000010.1 Primary Assembly 189239 na NODE_11 unplaced-scaffold na na PQHZ01000011.1 = NZ_PQHZ01000011.1 Primary Assembly 180152 na NODE_12 unplaced-scaffold na na PQHZ01000012.1 = NZ_PQHZ01000012.1 Primary Assembly 174143 na NODE_13 unplaced-scaffold na na PQHZ01000013.1 = NZ_PQHZ01000013.1 Primary Assembly 149060 na NODE_14 unplaced-scaffold na na PQHZ01000014.1 = NZ_PQHZ01000014.1 Primary Assembly 147346 na NODE_15 unplaced-scaffold na na PQHZ01000015.1 = NZ_PQHZ01000015.1 Primary Assembly 142724 na NODE_16 unplaced-scaffold na na PQHZ01000016.1 = NZ_PQHZ01000016.1 Primary Assembly 118400 na NODE_17 unplaced-scaffold na na PQHZ01000017.1 = NZ_PQHZ01000017.1 Primary Assembly 115916 na NODE_18 unplaced-scaffold na na PQHZ01000018.1 = NZ_PQHZ01000018.1 Primary Assembly 115052 na NODE_19 unplaced-scaffold na na PQHZ01000019.1 = NZ_PQHZ01000019.1 Primary Assembly 113221 na NODE_20 unplaced-scaffold na na PQHZ01000020.1 = NZ_PQHZ01000020.1 Primary Assembly 109983 na NODE_21 unplaced-scaffold na na PQHZ01000021.1 = NZ_PQHZ01000021.1 Primary Assembly 107924 na NODE_22 unplaced-scaffold na na PQHZ01000022.1 = NZ_PQHZ01000022.1 Primary Assembly 105083 na NODE_23 unplaced-scaffold na na PQHZ01000023.1 = NZ_PQHZ01000023.1 Primary Assembly 100424 na NODE_24 unplaced-scaffold na na PQHZ01000024.1 = NZ_PQHZ01000024.1 Primary Assembly 89701 na NODE_25 unplaced-scaffold na na PQHZ01000025.1 = NZ_PQHZ01000025.1 Primary Assembly 88334 na NODE_26 unplaced-scaffold na na PQHZ01000026.1 = NZ_PQHZ01000026.1 Primary Assembly 87912 na NODE_27 unplaced-scaffold na na PQHZ01000027.1 = NZ_PQHZ01000027.1 Primary Assembly 87765 na NODE_28 unplaced-scaffold na na PQHZ01000028.1 = NZ_PQHZ01000028.1 Primary Assembly 87607 na NODE_29 unplaced-scaffold na na PQHZ01000029.1 = NZ_PQHZ01000029.1 Primary Assembly 85928 na NODE_30 unplaced-scaffold na na PQHZ01000030.1 = NZ_PQHZ01000030.1 Primary Assembly 82466 na NODE_31 unplaced-scaffold na na PQHZ01000031.1 = NZ_PQHZ01000031.1 Primary Assembly 82041 na NODE_32 unplaced-scaffold na na PQHZ01000032.1 = NZ_PQHZ01000032.1 Primary Assembly 77126 na NODE_33 unplaced-scaffold na na PQHZ01000033.1 = NZ_PQHZ01000033.1 Primary Assembly 73627 na NODE_34 unplaced-scaffold na na PQHZ01000034.1 = NZ_PQHZ01000034.1 Primary Assembly 71609 na NODE_35 unplaced-scaffold na na PQHZ01000035.1 = NZ_PQHZ01000035.1 Primary Assembly 66144 na NODE_36 unplaced-scaffold na na PQHZ01000036.1 = NZ_PQHZ01000036.1 Primary Assembly 65360 na NODE_37 unplaced-scaffold na na PQHZ01000037.1 = NZ_PQHZ01000037.1 Primary Assembly 65314 na NODE_38 unplaced-scaffold na na PQHZ01000038.1 = NZ_PQHZ01000038.1 Primary Assembly 63598 na NODE_39 unplaced-scaffold na na PQHZ01000039.1 = NZ_PQHZ01000039.1 Primary Assembly 61609 na NODE_40 unplaced-scaffold na na PQHZ01000040.1 = NZ_PQHZ01000040.1 Primary Assembly 60045 na NODE_41 unplaced-scaffold na na PQHZ01000041.1 = NZ_PQHZ01000041.1 Primary Assembly 59779 na NODE_42 unplaced-scaffold na na PQHZ01000042.1 = NZ_PQHZ01000042.1 Primary Assembly 57383 na NODE_43 unplaced-scaffold na na PQHZ01000043.1 = NZ_PQHZ01000043.1 Primary Assembly 56200 na NODE_44 unplaced-scaffold na na PQHZ01000044.1 = NZ_PQHZ01000044.1 Primary Assembly 55923 na NODE_45 unplaced-scaffold na na PQHZ01000045.1 = NZ_PQHZ01000045.1 Primary Assembly 52779 na NODE_46 unplaced-scaffold na na PQHZ01000046.1 = NZ_PQHZ01000046.1 Primary Assembly 50550 na NODE_47 unplaced-scaffold na na PQHZ01000047.1 = NZ_PQHZ01000047.1 Primary Assembly 47993 na NODE_48b unplaced-scaffold na na PQHZ01000048.1 = NZ_PQHZ01000048.1 Primary Assembly 45446 na NODE_49 unplaced-scaffold na na PQHZ01000049.1 = NZ_PQHZ01000049.1 Primary Assembly 45192 na NODE_50 unplaced-scaffold na na PQHZ01000050.1 = NZ_PQHZ01000050.1 Primary Assembly 43910 na NODE_51 unplaced-scaffold na na PQHZ01000051.1 = NZ_PQHZ01000051.1 Primary Assembly 42656 na NODE_52 unplaced-scaffold na na PQHZ01000052.1 = NZ_PQHZ01000052.1 Primary Assembly 41986 na NODE_53 unplaced-scaffold na na PQHZ01000053.1 = NZ_PQHZ01000053.1 Primary Assembly 39262 na NODE_54 unplaced-scaffold na na PQHZ01000054.1 = NZ_PQHZ01000054.1 Primary Assembly 38615 na NODE_55 unplaced-scaffold na na PQHZ01000055.1 = NZ_PQHZ01000055.1 Primary Assembly 36601 na NODE_56 unplaced-scaffold na na PQHZ01000056.1 = NZ_PQHZ01000056.1 Primary Assembly 35541 na NODE_57 unplaced-scaffold na na PQHZ01000057.1 = NZ_PQHZ01000057.1 Primary Assembly 34918 na NODE_58 unplaced-scaffold na na PQHZ01000058.1 = NZ_PQHZ01000058.1 Primary Assembly 34882 na NODE_59 unplaced-scaffold na na PQHZ01000059.1 = NZ_PQHZ01000059.1 Primary Assembly 34108 na NODE_60 unplaced-scaffold na na PQHZ01000060.1 = NZ_PQHZ01000060.1 Primary Assembly 33505 na NODE_61 unplaced-scaffold na na PQHZ01000061.1 = NZ_PQHZ01000061.1 Primary Assembly 32618 na NODE_62 unplaced-scaffold na na PQHZ01000062.1 = NZ_PQHZ01000062.1 Primary Assembly 32533 na NODE_63 unplaced-scaffold na na PQHZ01000063.1 = NZ_PQHZ01000063.1 Primary Assembly 31808 na NODE_64 unplaced-scaffold na na PQHZ01000064.1 = NZ_PQHZ01000064.1 Primary Assembly 30478 na NODE_65 unplaced-scaffold na na PQHZ01000065.1 = NZ_PQHZ01000065.1 Primary Assembly 28876 na NODE_66 unplaced-scaffold na na PQHZ01000066.1 = NZ_PQHZ01000066.1 Primary Assembly 28542 na NODE_67 unplaced-scaffold na na PQHZ01000067.1 = NZ_PQHZ01000067.1 Primary Assembly 27319 na NODE_68 unplaced-scaffold na na PQHZ01000068.1 = NZ_PQHZ01000068.1 Primary Assembly 27279 na NODE_69 unplaced-scaffold na na PQHZ01000069.1 = NZ_PQHZ01000069.1 Primary Assembly 27275 na NODE_70 unplaced-scaffold na na PQHZ01000070.1 = NZ_PQHZ01000070.1 Primary Assembly 26356 na NODE_71 unplaced-scaffold na na PQHZ01000071.1 = NZ_PQHZ01000071.1 Primary Assembly 25922 na NODE_72 unplaced-scaffold na na PQHZ01000072.1 = NZ_PQHZ01000072.1 Primary Assembly 24372 na NODE_73 unplaced-scaffold na na PQHZ01000073.1 = NZ_PQHZ01000073.1 Primary Assembly 24126 na NODE_74 unplaced-scaffold na na PQHZ01000074.1 = NZ_PQHZ01000074.1 Primary Assembly 23488 na NODE_75 unplaced-scaffold na na PQHZ01000075.1 = NZ_PQHZ01000075.1 Primary Assembly 22484 na NODE_76 unplaced-scaffold na na PQHZ01000076.1 = NZ_PQHZ01000076.1 Primary Assembly 22067 na NODE_77 unplaced-scaffold na na PQHZ01000077.1 = NZ_PQHZ01000077.1 Primary Assembly 20725 na NODE_78 unplaced-scaffold na na PQHZ01000078.1 = NZ_PQHZ01000078.1 Primary Assembly 19661 na NODE_79 unplaced-scaffold na na PQHZ01000079.1 = NZ_PQHZ01000079.1 Primary Assembly 18881 na NODE_80 unplaced-scaffold na na PQHZ01000080.1 = NZ_PQHZ01000080.1 Primary Assembly 18767 na NODE_81 unplaced-scaffold na na PQHZ01000081.1 = NZ_PQHZ01000081.1 Primary Assembly 18371 na NODE_82 unplaced-scaffold na na PQHZ01000082.1 = NZ_PQHZ01000082.1 Primary Assembly 18179 na NODE_83 unplaced-scaffold na na PQHZ01000083.1 = NZ_PQHZ01000083.1 Primary Assembly 17216 na NODE_84 unplaced-scaffold na na PQHZ01000084.1 = NZ_PQHZ01000084.1 Primary Assembly 16118 na NODE_85 unplaced-scaffold na na PQHZ01000085.1 = NZ_PQHZ01000085.1 Primary Assembly 15856 na NODE_86 unplaced-scaffold na na PQHZ01000086.1 = NZ_PQHZ01000086.1 Primary Assembly 15721 na NODE_87 unplaced-scaffold na na PQHZ01000087.1 = NZ_PQHZ01000087.1 Primary Assembly 15011 na NODE_88b unplaced-scaffold na na PQHZ01000088.1 = NZ_PQHZ01000088.1 Primary Assembly 12498 na NODE_89 unplaced-scaffold na na PQHZ01000089.1 = NZ_PQHZ01000089.1 Primary Assembly 12371 na NODE_90 unplaced-scaffold na na PQHZ01000090.1 = NZ_PQHZ01000090.1 Primary Assembly 12237 na NODE_91 unplaced-scaffold na na PQHZ01000091.1 = NZ_PQHZ01000091.1 Primary Assembly 11690 na NODE_92 unplaced-scaffold na na PQHZ01000092.1 = NZ_PQHZ01000092.1 Primary Assembly 11530 na NODE_93 unplaced-scaffold na na PQHZ01000093.1 = NZ_PQHZ01000093.1 Primary Assembly 11316 na NODE_94 unplaced-scaffold na na PQHZ01000094.1 = NZ_PQHZ01000094.1 Primary Assembly 9717 na NODE_95 unplaced-scaffold na na PQHZ01000095.1 = NZ_PQHZ01000095.1 Primary Assembly 9704 na NODE_96 unplaced-scaffold na na PQHZ01000096.1 = NZ_PQHZ01000096.1 Primary Assembly 9104 na NODE_97 unplaced-scaffold na na PQHZ01000097.1 = NZ_PQHZ01000097.1 Primary Assembly 8462 na NODE_98 unplaced-scaffold na na PQHZ01000098.1 = NZ_PQHZ01000098.1 Primary Assembly 7784 na NODE_99 unplaced-scaffold na na PQHZ01000099.1 = NZ_PQHZ01000099.1 Primary Assembly 7752 na NODE_100 unplaced-scaffold na na PQHZ01000100.1 = NZ_PQHZ01000100.1 Primary Assembly 7589 na NODE_101 unplaced-scaffold na na PQHZ01000101.1 = NZ_PQHZ01000101.1 Primary Assembly 7520 na NODE_102 unplaced-scaffold na na PQHZ01000102.1 = NZ_PQHZ01000102.1 Primary Assembly 7315 na NODE_103 unplaced-scaffold na na PQHZ01000103.1 = NZ_PQHZ01000103.1 Primary Assembly 6986 na NODE_104 unplaced-scaffold na na PQHZ01000104.1 = NZ_PQHZ01000104.1 Primary Assembly 6692 na NODE_105 unplaced-scaffold na na PQHZ01000105.1 = NZ_PQHZ01000105.1 Primary Assembly 6567 na NODE_106 unplaced-scaffold na na PQHZ01000106.1 = NZ_PQHZ01000106.1 Primary Assembly 5588 na NODE_107 unplaced-scaffold na na PQHZ01000107.1 = NZ_PQHZ01000107.1 Primary Assembly 5504 na NODE_108 unplaced-scaffold na na PQHZ01000108.1 = NZ_PQHZ01000108.1 Primary Assembly 5315 na NODE_109 unplaced-scaffold na na PQHZ01000109.1 = NZ_PQHZ01000109.1 Primary Assembly 5278 na NODE_110 unplaced-scaffold na na PQHZ01000110.1 = NZ_PQHZ01000110.1 Primary Assembly 5250 na NODE_111 unplaced-scaffold na na PQHZ01000111.1 = NZ_PQHZ01000111.1 Primary Assembly 4994 na NODE_112 unplaced-scaffold na na PQHZ01000112.1 = NZ_PQHZ01000112.1 Primary Assembly 3569 na NODE_113 unplaced-scaffold na na PQHZ01000113.1 = NZ_PQHZ01000113.1 Primary Assembly 3477 na NODE_114 unplaced-scaffold na na PQHZ01000114.1 = NZ_PQHZ01000114.1 Primary Assembly 3304 na NODE_115 unplaced-scaffold na na PQHZ01000115.1 = NZ_PQHZ01000115.1 Primary Assembly 3051 na NODE_116 unplaced-scaffold na na PQHZ01000116.1 = NZ_PQHZ01000116.1 Primary Assembly 2672 na NODE_117 unplaced-scaffold na na PQHZ01000117.1 = NZ_PQHZ01000117.1 Primary Assembly 1936 na NODE_118 unplaced-scaffold na na PQHZ01000118.1 = NZ_PQHZ01000118.1 Primary Assembly 1738 na NODE_119 unplaced-scaffold na na PQHZ01000119.1 = NZ_PQHZ01000119.1 Primary Assembly 1707 na NODE_120 unplaced-scaffold na na PQHZ01000120.1 = NZ_PQHZ01000120.1 Primary Assembly 1543 na NODE_121 unplaced-scaffold na na PQHZ01000121.1 = NZ_PQHZ01000121.1 Primary Assembly 1502 na NODE_122 unplaced-scaffold na na PQHZ01000122.1 = NZ_PQHZ01000122.1 Primary Assembly 1402 na NODE_123 unplaced-scaffold na na PQHZ01000123.1 = NZ_PQHZ01000123.1 Primary Assembly 1370 na NODE_124 unplaced-scaffold na na PQHZ01000124.1 = NZ_PQHZ01000124.1 Primary Assembly 1357 na NODE_125 unplaced-scaffold na na PQHZ01000125.1 = NZ_PQHZ01000125.1 Primary Assembly 1305 na NODE_126 unplaced-scaffold na na PQHZ01000126.1 = NZ_PQHZ01000126.1 Primary Assembly 1235 na NODE_127 unplaced-scaffold na na PQHZ01000127.1 = NZ_PQHZ01000127.1 Primary Assembly 1121 na NODE_128 unplaced-scaffold na na PQHZ01000128.1 = NZ_PQHZ01000128.1 Primary Assembly 1098 na NODE_129 unplaced-scaffold na na PQHZ01000129.1 = NZ_PQHZ01000129.1 Primary Assembly 1080 na NODE_130 unplaced-scaffold na na PQHZ01000130.1 = NZ_PQHZ01000130.1 Primary Assembly 1067 na NODE_131 unplaced-scaffold na na PQHZ01000131.1 = NZ_PQHZ01000131.1 Primary Assembly 1054 na