# Assembly name: ASM340002v1 # Organism name: Pyrobaculum aerophilum (crenarchaeotes) # Infraspecific name: strain=YKB31 # Taxid: 13773 # BioSample: SAMN07344349 # BioProject: PRJNA393893 # Submitter: UC Berkeley # Date: 2018-08-16 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: NMUE01 # Assembly method: SPAdes v. 2017-07-06 # Expected final version: yes # Genome coverage: 43.75x # Sequencing technology: IonTorrent # GenBank assembly accession: GCA_003400025.1 # RefSeq assembly accession: GCF_003400025.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003400035.1 GCF_003400035.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_124046_cov_12.2363_ID_4297 unplaced-scaffold na na NMUE01000001.1 = NZ_NMUE01000001.1 Primary Assembly 124046 na NODE_2_length_113551_cov_11.1912_ID_4299 unplaced-scaffold na na NMUE01000002.1 = NZ_NMUE01000002.1 Primary Assembly 113551 na NODE_3_length_97703_cov_11.7315_ID_4301 unplaced-scaffold na na NMUE01000003.1 = NZ_NMUE01000003.1 Primary Assembly 97703 na NODE_4_length_77655_cov_13.2808_ID_4303 unplaced-scaffold na na NMUE01000004.1 = NZ_NMUE01000004.1 Primary Assembly 77655 na NODE_5_length_71372_cov_11.8197_ID_4305 unplaced-scaffold na na NMUE01000005.1 = NZ_NMUE01000005.1 Primary Assembly 71372 na NODE_6_length_71363_cov_10.8075_ID_4307 unplaced-scaffold na na NMUE01000006.1 = NZ_NMUE01000006.1 Primary Assembly 71363 na NODE_7_length_69136_cov_12.5013_ID_4309 unplaced-scaffold na na NMUE01000007.1 = NZ_NMUE01000007.1 Primary Assembly 69136 na NODE_8_length_63350_cov_12.2908_ID_4311 unplaced-scaffold na na NMUE01000008.1 = NZ_NMUE01000008.1 Primary Assembly 63350 na NODE_9_length_63045_cov_12.1531_ID_4313 unplaced-scaffold na na NMUE01000009.1 = NZ_NMUE01000009.1 Primary Assembly 63045 na NODE_10_length_57139_cov_14.044_ID_4315 unplaced-scaffold na na NMUE01000010.1 = NZ_NMUE01000010.1 Primary Assembly 57139 na NODE_11_length_56667_cov_11.6092_ID_4317 unplaced-scaffold na na NMUE01000011.1 = NZ_NMUE01000011.1 Primary Assembly 56667 na NODE_12_length_54697_cov_11.5133_ID_4319 unplaced-scaffold na na NMUE01000012.1 = NZ_NMUE01000012.1 Primary Assembly 54697 na NODE_13_length_53607_cov_9.70939_ID_4321 unplaced-scaffold na na NMUE01000013.1 = NZ_NMUE01000013.1 Primary Assembly 53607 na NODE_14_length_49402_cov_13.4775_ID_4323 unplaced-scaffold na na NMUE01000014.1 = NZ_NMUE01000014.1 Primary Assembly 49402 na NODE_15_length_45842_cov_13.5659_ID_4325 unplaced-scaffold na na NMUE01000015.1 = NZ_NMUE01000015.1 Primary Assembly 45842 na NODE_16_length_44921_cov_11.5573_ID_4327 unplaced-scaffold na na NMUE01000016.1 = NZ_NMUE01000016.1 Primary Assembly 44921 na NODE_17_length_43091_cov_12.3841_ID_4329 unplaced-scaffold na na NMUE01000017.1 = NZ_NMUE01000017.1 Primary Assembly 43091 na NODE_18_length_43013_cov_12.6174_ID_4331 unplaced-scaffold na na NMUE01000018.1 = NZ_NMUE01000018.1 Primary Assembly 43013 na NODE_19_length_40015_cov_11.9037_ID_4333 unplaced-scaffold na na NMUE01000019.1 = NZ_NMUE01000019.1 Primary Assembly 40015 na NODE_20_length_37019_cov_11.382_ID_4335 unplaced-scaffold na na NMUE01000020.1 = NZ_NMUE01000020.1 Primary Assembly 37019 na NODE_21_length_36297_cov_9.87561_ID_4337 unplaced-scaffold na na NMUE01000021.1 = NZ_NMUE01000021.1 Primary Assembly 36297 na NODE_22_length_34109_cov_11.5787_ID_4339 unplaced-scaffold na na NMUE01000022.1 = NZ_NMUE01000022.1 Primary Assembly 34109 na NODE_23_length_32396_cov_13.1263_ID_4341 unplaced-scaffold na na NMUE01000023.1 = NZ_NMUE01000023.1 Primary Assembly 32396 na NODE_24_length_31778_cov_11.534_ID_4343 unplaced-scaffold na na NMUE01000024.1 = NZ_NMUE01000024.1 Primary Assembly 31778 na NODE_25_length_31454_cov_13.482_ID_4345 unplaced-scaffold na na NMUE01000025.1 = NZ_NMUE01000025.1 Primary Assembly 31454 na NODE_26_length_31225_cov_13.3757_ID_4347 unplaced-scaffold na na NMUE01000026.1 = NZ_NMUE01000026.1 Primary Assembly 31225 na NODE_27_length_30609_cov_12.8431_ID_4349 unplaced-scaffold na na NMUE01000027.1 = NZ_NMUE01000027.1 Primary Assembly 30609 na NODE_28_length_30597_cov_14.2011_ID_4351 unplaced-scaffold na na NMUE01000028.1 = NZ_NMUE01000028.1 Primary Assembly 30597 na NODE_29_length_30547_cov_11.0808_ID_4353 unplaced-scaffold na na NMUE01000029.1 = NZ_NMUE01000029.1 Primary Assembly 30547 na NODE_30_length_30472_cov_13.4296_ID_4355 unplaced-scaffold na na NMUE01000030.1 = NZ_NMUE01000030.1 Primary Assembly 30472 na NODE_31_length_30293_cov_11.2521_ID_4357 unplaced-scaffold na na NMUE01000031.1 = NZ_NMUE01000031.1 Primary Assembly 30293 na NODE_32_length_30102_cov_13.7921_ID_4359 unplaced-scaffold na na NMUE01000032.1 = NZ_NMUE01000032.1 Primary Assembly 30102 na NODE_33_length_29293_cov_12.0348_ID_4361 unplaced-scaffold na na NMUE01000033.1 = NZ_NMUE01000033.1 Primary Assembly 29293 na NODE_34_length_27797_cov_11.5204_ID_4363 unplaced-scaffold na na NMUE01000034.1 = NZ_NMUE01000034.1 Primary Assembly 27797 na NODE_35_length_27557_cov_10.7919_ID_4365 unplaced-scaffold na na NMUE01000035.1 = NZ_NMUE01000035.1 Primary Assembly 27557 na NODE_36_length_25113_cov_13.4919_ID_4367 unplaced-scaffold na na NMUE01000036.1 = NZ_NMUE01000036.1 Primary Assembly 25113 na NODE_37_length_24907_cov_11.6633_ID_4369 unplaced-scaffold na na NMUE01000037.1 = NZ_NMUE01000037.1 Primary Assembly 24907 na NODE_38_length_23994_cov_12.3364_ID_4371 unplaced-scaffold na na NMUE01000038.1 = NZ_NMUE01000038.1 Primary Assembly 23994 na NODE_39_length_23597_cov_14.0888_ID_4373 unplaced-scaffold na na NMUE01000039.1 = NZ_NMUE01000039.1 Primary Assembly 23597 na NODE_40_length_23575_cov_12.3888_ID_4375 unplaced-scaffold na na NMUE01000040.1 = NZ_NMUE01000040.1 Primary Assembly 23575 na NODE_41_length_23389_cov_10.4176_ID_4377 unplaced-scaffold na na NMUE01000041.1 = NZ_NMUE01000041.1 Primary Assembly 23389 na NODE_42_length_23277_cov_11.3853_ID_4379 unplaced-scaffold na na NMUE01000042.1 = NZ_NMUE01000042.1 Primary Assembly 23277 na NODE_43_length_23123_cov_12.3256_ID_4381 unplaced-scaffold na na NMUE01000043.1 = NZ_NMUE01000043.1 Primary Assembly 23123 na NODE_44_length_22991_cov_10.9691_ID_4383 unplaced-scaffold na na NMUE01000044.1 = NZ_NMUE01000044.1 Primary Assembly 22991 na NODE_45_length_22476_cov_10.5937_ID_4385 unplaced-scaffold na na NMUE01000045.1 = NZ_NMUE01000045.1 Primary Assembly 22476 na NODE_46_length_22028_cov_12.7115_ID_4387 unplaced-scaffold na na NMUE01000046.1 = NZ_NMUE01000046.1 Primary Assembly 22028 na NODE_47_length_21239_cov_12.3882_ID_4389 unplaced-scaffold na na NMUE01000047.1 = NZ_NMUE01000047.1 Primary Assembly 21239 na NODE_48_length_18631_cov_10.0183_ID_4391 unplaced-scaffold na na NMUE01000048.1 = NZ_NMUE01000048.1 Primary Assembly 18631 na NODE_49_length_18183_cov_10.2144_ID_4393 unplaced-scaffold na na NMUE01000049.1 = NZ_NMUE01000049.1 Primary Assembly 18183 na NODE_50_length_17689_cov_12.3899_ID_4395 unplaced-scaffold na na NMUE01000050.1 = NZ_NMUE01000050.1 Primary Assembly 17689 na NODE_51_length_17578_cov_11.7837_ID_4397 unplaced-scaffold na na NMUE01000051.1 = NZ_NMUE01000051.1 Primary Assembly 17578 na NODE_52_length_16940_cov_10.0566_ID_4399 unplaced-scaffold na na NMUE01000052.1 = NZ_NMUE01000052.1 Primary Assembly 16940 na NODE_53_length_16688_cov_9.43956_ID_4401 unplaced-scaffold na na NMUE01000053.1 = NZ_NMUE01000053.1 Primary Assembly 16688 na NODE_54_length_15900_cov_13.936_ID_4403 unplaced-scaffold na na NMUE01000054.1 = NZ_NMUE01000054.1 Primary Assembly 15900 na NODE_55_length_15646_cov_10.7253_ID_4405 unplaced-scaffold na na NMUE01000055.1 = NZ_NMUE01000055.1 Primary Assembly 15646 na NODE_56_length_15649_cov_10.3429_ID_4407 unplaced-scaffold na na NMUE01000056.1 = NZ_NMUE01000056.1 Primary Assembly 15649 na NODE_57_length_14885_cov_10.9175_ID_4409 unplaced-scaffold na na NMUE01000057.1 = NZ_NMUE01000057.1 Primary Assembly 14885 na NODE_58_length_14548_cov_11.4463_ID_4411 unplaced-scaffold na na NMUE01000058.1 = NZ_NMUE01000058.1 Primary Assembly 14548 na NODE_59_length_14270_cov_11.1742_ID_4413 unplaced-scaffold na na NMUE01000059.1 = NZ_NMUE01000059.1 Primary Assembly 14270 na NODE_60_length_13895_cov_11.4225_ID_4415 unplaced-scaffold na na NMUE01000060.1 = NZ_NMUE01000060.1 Primary Assembly 13895 na NODE_61_length_13390_cov_9.97678_ID_4417 unplaced-scaffold na na NMUE01000061.1 = NZ_NMUE01000061.1 Primary Assembly 13390 na NODE_62_length_13206_cov_10.4361_ID_4419 unplaced-scaffold na na NMUE01000062.1 = NZ_NMUE01000062.1 Primary Assembly 13206 na NODE_63_length_13190_cov_10.7762_ID_4421 unplaced-scaffold na na NMUE01000063.1 = NZ_NMUE01000063.1 Primary Assembly 13190 na NODE_64_length_12972_cov_11.0582_ID_4423 unplaced-scaffold na na NMUE01000064.1 = NZ_NMUE01000064.1 Primary Assembly 12972 na NODE_65_length_12619_cov_10.8611_ID_4425 unplaced-scaffold na na NMUE01000065.1 = NZ_NMUE01000065.1 Primary Assembly 12619 na NODE_66_length_12437_cov_12.1827_ID_4427 unplaced-scaffold na na NMUE01000066.1 = NZ_NMUE01000066.1 Primary Assembly 12437 na NODE_67_length_11919_cov_10.4562_ID_4429 unplaced-scaffold na na NMUE01000067.1 = NZ_NMUE01000067.1 Primary Assembly 11919 na NODE_68_length_11463_cov_11.1755_ID_4431 unplaced-scaffold na na NMUE01000068.1 = NZ_NMUE01000068.1 Primary Assembly 11463 na NODE_69_length_11438_cov_10.8883_ID_4433 unplaced-scaffold na na NMUE01000069.1 = NZ_NMUE01000069.1 Primary Assembly 11438 na NODE_70_length_11058_cov_13.1157_ID_4435 unplaced-scaffold na na NMUE01000070.1 = NZ_NMUE01000070.1 Primary Assembly 11058 na NODE_71_length_9788_cov_9.98013_ID_4437 unplaced-scaffold na na NMUE01000071.1 = NZ_NMUE01000071.1 Primary Assembly 9788 na NODE_72_length_9637_cov_10.4338_ID_4439 unplaced-scaffold na na NMUE01000072.1 = NZ_NMUE01000072.1 Primary Assembly 9637 na NODE_73_length_9608_cov_8.83291_ID_4441 unplaced-scaffold na na NMUE01000073.1 = NZ_NMUE01000073.1 Primary Assembly 9608 na NODE_74_length_9601_cov_12.8098_ID_4443 unplaced-scaffold na na NMUE01000074.1 = NZ_NMUE01000074.1 Primary Assembly 9601 na NODE_75_length_9476_cov_10.2868_ID_4445 unplaced-scaffold na na NMUE01000075.1 = NZ_NMUE01000075.1 Primary Assembly 9476 na NODE_76_length_9425_cov_12.542_ID_4447 unplaced-scaffold na na NMUE01000076.1 = NZ_NMUE01000076.1 Primary Assembly 9425 na NODE_77_length_8910_cov_13.6221_ID_4449 unplaced-scaffold na na NMUE01000077.1 = NZ_NMUE01000077.1 Primary Assembly 8910 na NODE_78_length_8292_cov_11.0842_ID_4451 unplaced-scaffold na na NMUE01000078.1 = NZ_NMUE01000078.1 Primary Assembly 8292 na NODE_79_length_8207_cov_9.38552_ID_4453 unplaced-scaffold na na NMUE01000079.1 = NZ_NMUE01000079.1 Primary Assembly 8207 na NODE_80_length_8182_cov_9.50788_ID_4455 unplaced-scaffold na na NMUE01000080.1 = NZ_NMUE01000080.1 Primary Assembly 8182 na NODE_81_length_7260_cov_10.7575_ID_4457 unplaced-scaffold na na NMUE01000081.1 = NZ_NMUE01000081.1 Primary Assembly 7260 na NODE_82_length_6913_cov_13.5874_ID_4459 unplaced-scaffold na na NMUE01000082.1 = NZ_NMUE01000082.1 Primary Assembly 6913 na NODE_83_length_6420_cov_12.0181_ID_4461 unplaced-scaffold na na NMUE01000083.1 = NZ_NMUE01000083.1 Primary Assembly 6420 na NODE_84_length_6129_cov_14.6348_ID_4463 unplaced-scaffold na na NMUE01000084.1 = NZ_NMUE01000084.1 Primary Assembly 6129 na NODE_85_length_6159_cov_11.8316_ID_4465 unplaced-scaffold na na NMUE01000085.1 = NZ_NMUE01000085.1 Primary Assembly 6159 na NODE_86_length_5749_cov_7.76201_ID_4467 unplaced-scaffold na na NMUE01000086.1 = NZ_NMUE01000086.1 Primary Assembly 5749 na NODE_87_length_4988_cov_9.52439_ID_4469 unplaced-scaffold na na NMUE01000087.1 = NZ_NMUE01000087.1 Primary Assembly 4988 na NODE_88_length_4700_cov_12.1397_ID_4471 unplaced-scaffold na na NMUE01000088.1 = NZ_NMUE01000088.1 Primary Assembly 4700 na NODE_89_length_3995_cov_14.1637_ID_4473 unplaced-scaffold na na NMUE01000089.1 = NZ_NMUE01000089.1 Primary Assembly 3995 na NODE_90_length_3942_cov_6.62474_ID_4475 unplaced-scaffold na na NMUE01000090.1 = NZ_NMUE01000090.1 Primary Assembly 3942 na NODE_91_length_3792_cov_12.5176_ID_4477 unplaced-scaffold na na NMUE01000091.1 = NZ_NMUE01000091.1 Primary Assembly 3792 na NODE_92_length_3540_cov_10.4814_ID_4479 unplaced-scaffold na na NMUE01000092.1 = NZ_NMUE01000092.1 Primary Assembly 3540 na NODE_93_length_3477_cov_10.6236_ID_4481 unplaced-scaffold na na NMUE01000093.1 = NZ_NMUE01000093.1 Primary Assembly 3477 na NODE_94_length_3370_cov_7.04226_ID_4483 unplaced-scaffold na na NMUE01000094.1 = NZ_NMUE01000094.1 Primary Assembly 3370 na NODE_95_length_3220_cov_7.10993_ID_4485 unplaced-scaffold na na NMUE01000095.1 = NZ_NMUE01000095.1 Primary Assembly 3220 na NODE_96_length_3102_cov_8.82218_ID_4487 unplaced-scaffold na na NMUE01000096.1 = NZ_NMUE01000096.1 Primary Assembly 3102 na NODE_97_length_2977_cov_7.40414_ID_4489 unplaced-scaffold na na NMUE01000097.1 = NZ_NMUE01000097.1 Primary Assembly 2977 na NODE_98_length_2597_cov_9.54049_ID_4491 unplaced-scaffold na na NMUE01000098.1 = NZ_NMUE01000098.1 Primary Assembly 2597 na NODE_99_length_2572_cov_12.5031_ID_4493 unplaced-scaffold na na NMUE01000099.1 = NZ_NMUE01000099.1 Primary Assembly 2572 na NODE_100_length_2372_cov_8.29252_ID_4495 unplaced-scaffold na na NMUE01000100.1 = NZ_NMUE01000100.1 Primary Assembly 2372 na NODE_101_length_2331_cov_11.2971_ID_4497 unplaced-scaffold na na NMUE01000101.1 = NZ_NMUE01000101.1 Primary Assembly 2331 na NODE_102_length_2169_cov_17.3461_ID_4499 unplaced-scaffold na na NMUE01000102.1 = NZ_NMUE01000102.1 Primary Assembly 2169 na NODE_103_length_1847_cov_11.3843_ID_4501 unplaced-scaffold na na NMUE01000103.1 = NZ_NMUE01000103.1 Primary Assembly 1847 na NODE_104_length_1586_cov_7.80685_ID_4503 unplaced-scaffold na na NMUE01000104.1 = NZ_NMUE01000104.1 Primary Assembly 1586 na NODE_105_length_931_cov_26.3856_ID_4505 unplaced-scaffold na na NMUE01000105.1 = NZ_NMUE01000105.1 Primary Assembly 931 na NODE_106_length_877_cov_5.34881_ID_4507 unplaced-scaffold na na NMUE01000106.1 = NZ_NMUE01000106.1 Primary Assembly 877 na NODE_107_length_662_cov_3.63806_ID_4509 unplaced-scaffold na na NMUE01000107.1 = NZ_NMUE01000107.1 Primary Assembly 662 na NODE_109_length_600_cov_12.9387_ID_4513 unplaced-scaffold na na NMUE01000108.1 = NZ_NMUE01000108.1 Primary Assembly 600 na NODE_110_length_416_cov_17.5087_ID_4515 unplaced-scaffold na na NMUE01000109.1 = NZ_NMUE01000109.1 Primary Assembly 416 na NODE_111_length_341_cov_20.2243_ID_4517 unplaced-scaffold na na NMUE01000110.1 = NZ_NMUE01000110.1 Primary Assembly 341 na NODE_112_length_315_cov_18.7128_ID_4519 unplaced-scaffold na na NMUE01000111.1 = NZ_NMUE01000111.1 Primary Assembly 315 na