# Assembly name: ASM366039v1 # Organism name: Helicobacter vulpis (e-proteobacteria) # Infraspecific name: strain=L2 # Taxid: 2316076 # BioSample: SAMN09989572 # BioProject: PRJNA489839 # Submitter: Institute of Microbiology and Parasitology VF UL, Slovenia # Date: 2018-10-15 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: QXQT01 # Assembly method: SPAdes v. 3.9.1 # Expected final version: yes # Genome coverage: 162x # Sequencing technology: IonTorrent # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003660395.1 # RefSeq assembly accession: GCF_003660395.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003660415.1 GCF_003660415.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_132183_cov_117.129 unplaced-scaffold na na QXQT01000001.1 = NZ_QXQT01000001.1 Primary Assembly 132183 na NODE_2_length_130820_cov_113.967 unplaced-scaffold na na QXQT01000002.1 = NZ_QXQT01000002.1 Primary Assembly 130820 na NODE_3_length_112131_cov_118.374 unplaced-scaffold na na QXQT01000003.1 = NZ_QXQT01000003.1 Primary Assembly 112131 na NODE_4_length_103272_cov_112.691 unplaced-scaffold na na QXQT01000004.1 = NZ_QXQT01000004.1 Primary Assembly 103272 na NODE_5_length_97265_cov_106.381 unplaced-scaffold na na QXQT01000005.1 = NZ_QXQT01000005.1 Primary Assembly 97265 na NODE_6_length_87827_cov_108.348 unplaced-scaffold na na QXQT01000006.1 = NZ_QXQT01000006.1 Primary Assembly 87827 na NODE_7_length_80609_cov_112.674 unplaced-scaffold na na QXQT01000007.1 = NZ_QXQT01000007.1 Primary Assembly 80609 na NODE_8_length_73499_cov_110.216 unplaced-scaffold na na QXQT01000008.1 = NZ_QXQT01000008.1 Primary Assembly 73499 na NODE_9_length_73174_cov_116.135 unplaced-scaffold na na QXQT01000009.1 = NZ_QXQT01000009.1 Primary Assembly 73174 na NODE_10_length_61909_cov_108.7 unplaced-scaffold na na QXQT01000010.1 = NZ_QXQT01000010.1 Primary Assembly 61909 na NODE_11_length_61722_cov_113.204 unplaced-scaffold na na QXQT01000011.1 = NZ_QXQT01000011.1 Primary Assembly 61722 na NODE_12_length_58491_cov_110.331 unplaced-scaffold na na QXQT01000012.1 = NZ_QXQT01000012.1 Primary Assembly 58491 na NODE_13_length_55680_cov_111.997 unplaced-scaffold na na QXQT01000013.1 = NZ_QXQT01000013.1 Primary Assembly 55680 na NODE_14_length_49103_cov_116.526 unplaced-scaffold na na QXQT01000014.1 = NZ_QXQT01000014.1 Primary Assembly 49103 na NODE_15_length_36894_cov_107.358 unplaced-scaffold na na QXQT01000015.1 = NZ_QXQT01000015.1 Primary Assembly 36894 na NODE_16_length_35374_cov_115.254 unplaced-scaffold na na QXQT01000016.1 = NZ_QXQT01000016.1 Primary Assembly 35374 na NODE_17_length_35159_cov_106.529 unplaced-scaffold na na QXQT01000017.1 = NZ_QXQT01000017.1 Primary Assembly 35159 na NODE_18_length_32215_cov_106.03 unplaced-scaffold na na QXQT01000018.1 = NZ_QXQT01000018.1 Primary Assembly 32215 na NODE_19_length_24249_cov_110.904 unplaced-scaffold na na QXQT01000019.1 = NZ_QXQT01000019.1 Primary Assembly 24249 na NODE_20_length_22077_cov_112.726 unplaced-scaffold na na QXQT01000020.1 = NZ_QXQT01000020.1 Primary Assembly 22077 na NODE_21_length_19977_cov_112.22 unplaced-scaffold na na QXQT01000021.1 = NZ_QXQT01000021.1 Primary Assembly 19977 na NODE_22_length_17816_cov_104.251 unplaced-scaffold na na QXQT01000022.1 = NZ_QXQT01000022.1 Primary Assembly 17816 na NODE_23_length_17328_cov_117.789 unplaced-scaffold na na QXQT01000023.1 = NZ_QXQT01000023.1 Primary Assembly 17328 na NODE_24_length_17200_cov_117.499 unplaced-scaffold na na QXQT01000024.1 = NZ_QXQT01000024.1 Primary Assembly 17200 na NODE_25_length_16968_cov_116.789 unplaced-scaffold na na QXQT01000025.1 = NZ_QXQT01000025.1 Primary Assembly 16968 na NODE_26_length_16498_cov_110.467 unplaced-scaffold na na QXQT01000026.1 = NZ_QXQT01000026.1 Primary Assembly 16498 na NODE_27_length_14471_cov_117.085 unplaced-scaffold na na QXQT01000027.1 = NZ_QXQT01000027.1 Primary Assembly 14471 na NODE_28_length_14467_cov_102.9 unplaced-scaffold na na QXQT01000028.1 = NZ_QXQT01000028.1 Primary Assembly 14467 na NODE_29_length_13347_cov_99.2639 unplaced-scaffold na na QXQT01000029.1 = NZ_QXQT01000029.1 Primary Assembly 13347 na NODE_30_length_11967_cov_129.808 unplaced-scaffold na na QXQT01000030.1 = NZ_QXQT01000030.1 Primary Assembly 11967 na NODE_31_length_10268_cov_169.885 unplaced-scaffold na na QXQT01000031.1 = NZ_QXQT01000031.1 Primary Assembly 10268 na NODE_32_length_9941_cov_159.228 unplaced-scaffold na na QXQT01000032.1 = NZ_QXQT01000032.1 Primary Assembly 9941 na NODE_33_length_9243_cov_104.426 unplaced-scaffold na na QXQT01000033.1 = NZ_QXQT01000033.1 Primary Assembly 9243 na NODE_34_length_8607_cov_102.448 unplaced-scaffold na na QXQT01000034.1 = NZ_QXQT01000034.1 Primary Assembly 8607 na NODE_35_length_7021_cov_84.9399 unplaced-scaffold na na QXQT01000035.1 = NZ_QXQT01000035.1 Primary Assembly 7021 na NODE_36_length_6645_cov_78.0287 unplaced-scaffold na na QXQT01000036.1 = NZ_QXQT01000036.1 Primary Assembly 6645 na NODE_37_length_5881_cov_105.175 unplaced-scaffold na na QXQT01000037.1 = NZ_QXQT01000037.1 Primary Assembly 5881 na NODE_38_length_4316_cov_304.611 unplaced-scaffold na na QXQT01000038.1 = NZ_QXQT01000038.1 Primary Assembly 4316 na NODE_39_length_4260_cov_391.588 unplaced-scaffold na na QXQT01000039.1 = NZ_QXQT01000039.1 Primary Assembly 4260 na NODE_40_length_3760_cov_191.415 unplaced-scaffold na na QXQT01000040.1 = NZ_QXQT01000040.1 Primary Assembly 3760 na NODE_41_length_3645_cov_72.3466 unplaced-scaffold na na QXQT01000041.1 = NZ_QXQT01000041.1 Primary Assembly 3645 na NODE_42_length_3486_cov_100.665 unplaced-scaffold na na QXQT01000042.1 = NZ_QXQT01000042.1 Primary Assembly 3486 na NODE_43_length_3338_cov_107.019 unplaced-scaffold na na QXQT01000043.1 = NZ_QXQT01000043.1 Primary Assembly 3338 na NODE_44_length_2998_cov_187.464 unplaced-scaffold na na QXQT01000044.1 = NZ_QXQT01000044.1 Primary Assembly 2998 na NODE_45_length_2869_cov_99.3841 unplaced-scaffold na na QXQT01000045.1 = NZ_QXQT01000045.1 Primary Assembly 2869 na NODE_46_length_2819_cov_130.078 unplaced-scaffold na na QXQT01000046.1 = NZ_QXQT01000046.1 Primary Assembly 2819 na NODE_47_length_2762_cov_269.904 unplaced-scaffold na na QXQT01000047.1 = NZ_QXQT01000047.1 Primary Assembly 2762 na NODE_48_length_2375_cov_120.242 unplaced-scaffold na na QXQT01000048.1 = NZ_QXQT01000048.1 Primary Assembly 2375 na NODE_49_length_2358_cov_105.945 unplaced-scaffold na na QXQT01000049.1 = NZ_QXQT01000049.1 Primary Assembly 2358 na NODE_50_length_2095_cov_111.516 unplaced-scaffold na na QXQT01000050.1 = NZ_QXQT01000050.1 Primary Assembly 2095 na NODE_51_length_2039_cov_100.498 unplaced-scaffold na na QXQT01000051.1 = NZ_QXQT01000051.1 Primary Assembly 2039 na NODE_52_length_1947_cov_115.962 unplaced-scaffold na na QXQT01000052.1 = NZ_QXQT01000052.1 Primary Assembly 1947 na NODE_53_length_1816_cov_244.712 unplaced-scaffold na na QXQT01000053.1 = NZ_QXQT01000053.1 Primary Assembly 1816 na NODE_54_length_1664_cov_106.975 unplaced-scaffold na na QXQT01000054.1 = NZ_QXQT01000054.1 Primary Assembly 1664 na NODE_55_length_1628_cov_124.061 unplaced-scaffold na na QXQT01000055.1 = NZ_QXQT01000055.1 Primary Assembly 1628 na NODE_56_length_1558_cov_325.765 unplaced-scaffold na na QXQT01000056.1 = NZ_QXQT01000056.1 Primary Assembly 1558 na NODE_57_length_1557_cov_239.321 unplaced-scaffold na na QXQT01000057.1 = NZ_QXQT01000057.1 Primary Assembly 1557 na NODE_58_length_1452_cov_168.68 unplaced-scaffold na na QXQT01000058.1 = NZ_QXQT01000058.1 Primary Assembly 1452 na NODE_59_length_1208_cov_254.88 unplaced-scaffold na na QXQT01000059.1 = NZ_QXQT01000059.1 Primary Assembly 1208 na NODE_60_length_1203_cov_161.985 unplaced-scaffold na na QXQT01000060.1 = NZ_QXQT01000060.1 Primary Assembly 1203 na NODE_61_length_1143_cov_142.258 unplaced-scaffold na na QXQT01000061.1 = NZ_QXQT01000061.1 Primary Assembly 1143 na NODE_62_length_1141_cov_151.968 unplaced-scaffold na na QXQT01000062.1 = NZ_QXQT01000062.1 Primary Assembly 1141 na NODE_63_length_1067_cov_173.095 unplaced-scaffold na na QXQT01000063.1 = NZ_QXQT01000063.1 Primary Assembly 1067 na NODE_64_length_1064_cov_225.374 unplaced-scaffold na na QXQT01000064.1 = NZ_QXQT01000064.1 Primary Assembly 1064 na NODE_65_length_946_cov_149.947 unplaced-scaffold na na QXQT01000065.1 = NZ_QXQT01000065.1 Primary Assembly 946 na NODE_67_length_905_cov_99.2221 unplaced-scaffold na na QXQT01000066.1 = NZ_QXQT01000066.1 Primary Assembly 905 na NODE_68_length_904_cov_106.698 unplaced-scaffold na na QXQT01000067.1 = NZ_QXQT01000067.1 Primary Assembly 904 na NODE_69_length_886_cov_367.682 unplaced-scaffold na na QXQT01000068.1 = NZ_QXQT01000068.1 Primary Assembly 886 na NODE_70_length_884_cov_175.55 unplaced-scaffold na na QXQT01000069.1 = NZ_QXQT01000069.1 Primary Assembly 884 na NODE_71_length_845_cov_159.511 unplaced-scaffold na na QXQT01000070.1 = NZ_QXQT01000070.1 Primary Assembly 845 na NODE_72_length_845_cov_204.686 unplaced-scaffold na na QXQT01000071.1 = NZ_QXQT01000071.1 Primary Assembly 845 na NODE_73_length_804_cov_130.455 unplaced-scaffold na na QXQT01000072.1 = NZ_QXQT01000072.1 Primary Assembly 804 na NODE_74_length_800_cov_115.04 unplaced-scaffold na na QXQT01000073.1 = NZ_QXQT01000073.1 Primary Assembly 800 na NODE_75_length_789_cov_377.222 unplaced-scaffold na na QXQT01000074.1 = NZ_QXQT01000074.1 Primary Assembly 789 na NODE_76_length_779_cov_220.618 unplaced-scaffold na na QXQT01000075.1 = NZ_QXQT01000075.1 Primary Assembly 779 na NODE_77_length_765_cov_127.332 unplaced-scaffold na na QXQT01000076.1 = NZ_QXQT01000076.1 Primary Assembly 765 na NODE_78_length_754_cov_104.669 unplaced-scaffold na na QXQT01000077.1 = NZ_QXQT01000077.1 Primary Assembly 754 na NODE_79_length_711_cov_125.832 unplaced-scaffold na na QXQT01000078.1 = NZ_QXQT01000078.1 Primary Assembly 711 na NODE_80_length_711_cov_132.044 unplaced-scaffold na na QXQT01000079.1 = NZ_QXQT01000079.1 Primary Assembly 711 na NODE_81_length_645_cov_91.6685 unplaced-scaffold na na QXQT01000080.1 = NZ_QXQT01000080.1 Primary Assembly 645 na NODE_82_length_638_cov_140.464 unplaced-scaffold na na QXQT01000081.1 = NZ_QXQT01000081.1 Primary Assembly 638 na NODE_83_length_616_cov_233.453 unplaced-scaffold na na QXQT01000082.1 = NZ_QXQT01000082.1 Primary Assembly 616 na NODE_84_length_611_cov_214.451 unplaced-scaffold na na QXQT01000083.1 = NZ_QXQT01000083.1 Primary Assembly 611 na NODE_85_length_608_cov_144.941 unplaced-scaffold na na QXQT01000084.1 = NZ_QXQT01000084.1 Primary Assembly 608 na NODE_86_length_601_cov_154.627 unplaced-scaffold na na QXQT01000085.1 = NZ_QXQT01000085.1 Primary Assembly 601 na NODE_87_length_600_cov_180.281 unplaced-scaffold na na QXQT01000086.1 = NZ_QXQT01000086.1 Primary Assembly 600 na NODE_88_length_576_cov_91.8113 unplaced-scaffold na na QXQT01000087.1 = NZ_QXQT01000087.1 Primary Assembly 576 na NODE_89_length_553_cov_466.925 unplaced-scaffold na na QXQT01000088.1 = NZ_QXQT01000088.1 Primary Assembly 553 na NODE_90_length_545_cov_134.094 unplaced-scaffold na na QXQT01000089.1 = NZ_QXQT01000089.1 Primary Assembly 545 na NODE_91_length_540_cov_99.2902 unplaced-scaffold na na QXQT01000090.1 = NZ_QXQT01000090.1 Primary Assembly 540 na NODE_92_length_537_cov_294.432 unplaced-scaffold na na QXQT01000091.1 = NZ_QXQT01000091.1 Primary Assembly 537 na NODE_93_length_536_cov_104.863 unplaced-scaffold na na QXQT01000092.1 = NZ_QXQT01000092.1 Primary Assembly 536 na NODE_94_length_530_cov_255.508 unplaced-scaffold na na QXQT01000093.1 = NZ_QXQT01000093.1 Primary Assembly 530 na NODE_95_length_527_cov_53.9346 unplaced-scaffold na na QXQT01000094.1 = NZ_QXQT01000094.1 Primary Assembly 527 na NODE_96_length_505_cov_188.062 unplaced-scaffold na na QXQT01000095.1 = NZ_QXQT01000095.1 Primary Assembly 505 na NODE_97_length_485_cov_83.2176 unplaced-scaffold na na QXQT01000096.1 = NZ_QXQT01000096.1 Primary Assembly 485 na NODE_98_length_461_cov_148.749 unplaced-scaffold na na QXQT01000097.1 = NZ_QXQT01000097.1 Primary Assembly 461 na NODE_99_length_453_cov_217.393 unplaced-scaffold na na QXQT01000098.1 = NZ_QXQT01000098.1 Primary Assembly 453 na NODE_100_length_441_cov_230.759 unplaced-scaffold na na QXQT01000099.1 = NZ_QXQT01000099.1 Primary Assembly 441 na NODE_101_length_420_cov_148.744 unplaced-scaffold na na QXQT01000100.1 = NZ_QXQT01000100.1 Primary Assembly 420 na NODE_102_length_405_cov_190.748 unplaced-scaffold na na QXQT01000101.1 = NZ_QXQT01000101.1 Primary Assembly 405 na NODE_103_length_397_cov_236.768 unplaced-scaffold na na QXQT01000102.1 = NZ_QXQT01000102.1 Primary Assembly 397 na NODE_104_length_377_cov_84.7302 unplaced-scaffold na na QXQT01000103.1 = NZ_QXQT01000103.1 Primary Assembly 377 na NODE_105_length_346_cov_232.789 unplaced-scaffold na na QXQT01000104.1 = NZ_QXQT01000104.1 Primary Assembly 346 na NODE_106_length_291_cov_577.505 unplaced-scaffold na na QXQT01000105.1 = NZ_QXQT01000105.1 Primary Assembly 291 na NODE_107_length_277_cov_148.213 unplaced-scaffold na na QXQT01000106.1 = NZ_QXQT01000106.1 Primary Assembly 277 na NODE_108_length_270_cov_349.988 unplaced-scaffold na na QXQT01000107.1 = NZ_QXQT01000107.1 Primary Assembly 270 na NODE_109_length_264_cov_102.612 unplaced-scaffold na na QXQT01000108.1 = NZ_QXQT01000108.1 Primary Assembly 264 na NODE_110_length_261_cov_105.53 unplaced-scaffold na na QXQT01000109.1 = NZ_QXQT01000109.1 Primary Assembly 261 na NODE_111_length_262_cov_95.6442 unplaced-scaffold na na QXQT01000110.1 = NZ_QXQT01000110.1 Primary Assembly 262 na NODE_112_length_239_cov_97.8214 unplaced-scaffold na na QXQT01000111.1 = NZ_QXQT01000111.1 Primary Assembly 239 na NODE_113_length_239_cov_784.757 unplaced-scaffold na na QXQT01000112.1 = NZ_QXQT01000112.1 Primary Assembly 239 na NODE_114_length_236_cov_143.336 unplaced-scaffold na na QXQT01000113.1 = NZ_QXQT01000113.1 Primary Assembly 236 na NODE_115_length_202_cov_62.7476 unplaced-scaffold na na QXQT01000114.1 = NZ_QXQT01000114.1 Primary Assembly 202 na