# Assembly name: ASM372533v1 # Organism name: Parvibacter caecicola (actinobacteria) # Infraspecific name: strain=DSM 22242 # Taxid: 747645 # BioSample: SAMN09280234 # BioProject: PRJNA473639 # Submitter: Max Rubner-Institut # Date: 2018-11-13 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: QIBY01 # Assembly method: SPAdes v. v3.11.1 # Expected final version: yes # Genome coverage: 157.94x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003725335.1 # RefSeq assembly accession: GCF_003725335.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003725345.1 GCF_003725345.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name DSM22242T_contig_001 unplaced-scaffold na na QIBY01000001.1 = NZ_QIBY01000001.1 Primary Assembly 479779 na DSM22242T_contig_002 unplaced-scaffold na na QIBY01000002.1 = NZ_QIBY01000002.1 Primary Assembly 286563 na DSM22242T_contig_003 unplaced-scaffold na na QIBY01000003.1 = NZ_QIBY01000003.1 Primary Assembly 155914 na DSM22242T_contig_004 unplaced-scaffold na na QIBY01000004.1 = NZ_QIBY01000004.1 Primary Assembly 131134 na DSM22242T_contig_005 unplaced-scaffold na na QIBY01000005.1 = NZ_QIBY01000005.1 Primary Assembly 120984 na DSM22242T_contig_006 unplaced-scaffold na na QIBY01000006.1 = NZ_QIBY01000006.1 Primary Assembly 114979 na DSM22242T_contig_007 unplaced-scaffold na na QIBY01000007.1 = NZ_QIBY01000007.1 Primary Assembly 114718 na DSM22242T_contig_008 unplaced-scaffold na na QIBY01000008.1 = NZ_QIBY01000008.1 Primary Assembly 92006 na DSM22242T_contig_009 unplaced-scaffold na na QIBY01000009.1 = NZ_QIBY01000009.1 Primary Assembly 85115 na DSM22242T_contig_010 unplaced-scaffold na na QIBY01000010.1 = NZ_QIBY01000010.1 Primary Assembly 81782 na DSM22242T_contig_011 unplaced-scaffold na na QIBY01000011.1 = NZ_QIBY01000011.1 Primary Assembly 75863 na DSM22242T_contig_012 unplaced-scaffold na na QIBY01000012.1 = NZ_QIBY01000012.1 Primary Assembly 65849 na DSM22242T_contig_013 unplaced-scaffold na na QIBY01000013.1 = NZ_QIBY01000013.1 Primary Assembly 60370 na DSM22242T_contig_014 unplaced-scaffold na na QIBY01000014.1 = NZ_QIBY01000014.1 Primary Assembly 56391 na DSM22242T_contig_015 unplaced-scaffold na na QIBY01000015.1 = NZ_QIBY01000015.1 Primary Assembly 55110 na DSM22242T_contig_016 unplaced-scaffold na na QIBY01000016.1 = NZ_QIBY01000016.1 Primary Assembly 52184 na DSM22242T_contig_017 unplaced-scaffold na na QIBY01000017.1 = NZ_QIBY01000017.1 Primary Assembly 47184 na DSM22242T_contig_018 unplaced-scaffold na na QIBY01000018.1 = NZ_QIBY01000018.1 Primary Assembly 44063 na DSM22242T_contig_019 unplaced-scaffold na na QIBY01000019.1 = NZ_QIBY01000019.1 Primary Assembly 39621 na DSM22242T_contig_020 unplaced-scaffold na na QIBY01000020.1 = NZ_QIBY01000020.1 Primary Assembly 38105 na DSM22242T_contig_021 unplaced-scaffold na na QIBY01000021.1 = NZ_QIBY01000021.1 Primary Assembly 36590 na DSM22242T_contig_022 unplaced-scaffold na na QIBY01000022.1 = NZ_QIBY01000022.1 Primary Assembly 36494 na DSM22242T_contig_023 unplaced-scaffold na na QIBY01000023.1 = NZ_QIBY01000023.1 Primary Assembly 35282 na DSM22242T_contig_024 unplaced-scaffold na na QIBY01000024.1 = NZ_QIBY01000024.1 Primary Assembly 31152 na DSM22242T_contig_025 unplaced-scaffold na na QIBY01000025.1 = NZ_QIBY01000025.1 Primary Assembly 18563 na DSM22242T_contig_026 unplaced-scaffold na na QIBY01000026.1 = NZ_QIBY01000026.1 Primary Assembly 15471 na DSM22242T_contig_027 unplaced-scaffold na na QIBY01000027.1 = NZ_QIBY01000027.1 Primary Assembly 15352 na DSM22242T_contig_028 unplaced-scaffold na na QIBY01000028.1 = NZ_QIBY01000028.1 Primary Assembly 13771 na DSM22242T_contig_029 unplaced-scaffold na na QIBY01000029.1 = NZ_QIBY01000029.1 Primary Assembly 10796 na DSM22242T_contig_030 unplaced-scaffold na na QIBY01000030.1 = NZ_QIBY01000030.1 Primary Assembly 10695 na DSM22242T_contig_031 unplaced-scaffold na na QIBY01000031.1 = NZ_QIBY01000031.1 Primary Assembly 8103 na DSM22242T_contig_032 unplaced-scaffold na na QIBY01000032.1 = NZ_QIBY01000032.1 Primary Assembly 8071 na DSM22242T_contig_033 unplaced-scaffold na na QIBY01000033.1 = NZ_QIBY01000033.1 Primary Assembly 5576 na DSM22242T_contig_034 unplaced-scaffold na na QIBY01000034.1 = NZ_QIBY01000034.1 Primary Assembly 4746 na DSM22242T_contig_035 unplaced-scaffold na na QIBY01000035.1 = NZ_QIBY01000035.1 Primary Assembly 4181 na DSM22242T_contig_036 unplaced-scaffold na na QIBY01000036.1 = NZ_QIBY01000036.1 Primary Assembly 3956 na DSM22242T_contig_037 unplaced-scaffold na na QIBY01000037.1 = NZ_QIBY01000037.1 Primary Assembly 3764 na DSM22242T_contig_038 unplaced-scaffold na na QIBY01000038.1 = NZ_QIBY01000038.1 Primary Assembly 1936 na DSM22242T_contig_039 unplaced-scaffold na na QIBY01000039.1 = NZ_QIBY01000039.1 Primary Assembly 1696 na DSM22242T_contig_040 unplaced-scaffold na na QIBY01000040.1 = NZ_QIBY01000040.1 Primary Assembly 1572 na DSM22242T_contig_041 unplaced-scaffold na na QIBY01000041.1 = NZ_QIBY01000041.1 Primary Assembly 1116 na DSM22242T_contig_042 unplaced-scaffold na na QIBY01000042.1 = NZ_QIBY01000042.1 Primary Assembly 871 na DSM22242T_contig_043 unplaced-scaffold na na QIBY01000043.1 = NZ_QIBY01000043.1 Primary Assembly 682 na DSM22242T_contig_044 unplaced-scaffold na na QIBY01000044.1 = NZ_QIBY01000044.1 Primary Assembly 641 na DSM22242T_contig_045 unplaced-scaffold na na QIBY01000045.1 = NZ_QIBY01000045.1 Primary Assembly 634 na DSM22242T_contig_046 unplaced-scaffold na na QIBY01000046.1 = NZ_QIBY01000046.1 Primary Assembly 632 na DSM22242T_contig_047 unplaced-scaffold na na QIBY01000047.1 = NZ_QIBY01000047.1 Primary Assembly 609 na DSM22242T_contig_048 unplaced-scaffold na na QIBY01000048.1 = NZ_QIBY01000048.1 Primary Assembly 601 na DSM22242T_contig_049 unplaced-scaffold na na QIBY01000049.1 = NZ_QIBY01000049.1 Primary Assembly 599 na DSM22242T_contig_050 unplaced-scaffold na na QIBY01000050.1 = NZ_QIBY01000050.1 Primary Assembly 580 na DSM22242T_contig_051 unplaced-scaffold na na QIBY01000051.1 = NZ_QIBY01000051.1 Primary Assembly 579 na DSM22242T_contig_052 unplaced-scaffold na na QIBY01000052.1 = NZ_QIBY01000052.1 Primary Assembly 569 na DSM22242T_contig_053 unplaced-scaffold na na QIBY01000053.1 = NZ_QIBY01000053.1 Primary Assembly 551 na DSM22242T_contig_054 unplaced-scaffold na na QIBY01000054.1 = NZ_QIBY01000054.1 Primary Assembly 551 na DSM22242T_contig_055 unplaced-scaffold na na QIBY01000055.1 = NZ_QIBY01000055.1 Primary Assembly 550 na DSM22242T_contig_056 unplaced-scaffold na na QIBY01000056.1 = NZ_QIBY01000056.1 Primary Assembly 549 na DSM22242T_contig_057 unplaced-scaffold na na QIBY01000057.1 = NZ_QIBY01000057.1 Primary Assembly 548 na DSM22242T_contig_058 unplaced-scaffold na na QIBY01000058.1 = NZ_QIBY01000058.1 Primary Assembly 539 na DSM22242T_contig_059 unplaced-scaffold na na QIBY01000059.1 = NZ_QIBY01000059.1 Primary Assembly 535 na DSM22242T_contig_060 unplaced-scaffold na na QIBY01000060.1 = NZ_QIBY01000060.1 Primary Assembly 521 na DSM22242T_contig_061 unplaced-scaffold na na QIBY01000061.1 = NZ_QIBY01000061.1 Primary Assembly 517 na DSM22242T_contig_062 unplaced-scaffold na na QIBY01000062.1 = NZ_QIBY01000062.1 Primary Assembly 515 na DSM22242T_contig_063 unplaced-scaffold na na QIBY01000063.1 = NZ_QIBY01000063.1 Primary Assembly 509 na DSM22242T_contig_064 unplaced-scaffold na na QIBY01000064.1 = NZ_QIBY01000064.1 Primary Assembly 505 na