# Assembly name: ASM384983v1 # Organism name: Clostridium butyricum (firmicutes) # Infraspecific name: strain=JKT37 # Taxid: 1492 # BioSample: SAMN10464210 # BioProject: PRJNA506586 # Submitter: Faculty of Engineering and Built Environment # Date: 2018-11-28 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: RQKF01 # Assembly method: SPAdes v. AUGUST-2018 # Expected final version: yes # Genome coverage: 34.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_003849835.1 # RefSeq assembly accession: GCF_003849835.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003849855.1 GCF_003849855.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_14_length_79962_cov_129.904926 unlocalized-scaffold pNPD4_2 Plasmid RQKF01000014.1 = NZ_RQKF01000014.1 Primary Assembly 79962 na NODE_29_length_45436_cov_130.763553 unlocalized-scaffold pNPD4_2 Plasmid RQKF01000029.1 = NZ_RQKF01000029.1 Primary Assembly 45436 na NODE_48_length_29752_cov_135.424499 unlocalized-scaffold pNPD4_2 Plasmid RQKF01000048.1 = NZ_RQKF01000048.1 Primary Assembly 29752 na NODE_1_length_232190_cov_140.361376 unplaced-scaffold na na RQKF01000001.1 = NZ_RQKF01000001.1 Primary Assembly 232190 na NODE_2_length_223744_cov_154.855701 unplaced-scaffold na na RQKF01000002.1 = NZ_RQKF01000002.1 Primary Assembly 223744 na NODE_3_length_183495_cov_203.384537 unplaced-scaffold na na RQKF01000003.1 = NZ_RQKF01000003.1 Primary Assembly 183495 na NODE_4_length_161196_cov_172.061942 unplaced-scaffold na na RQKF01000004.1 = NZ_RQKF01000004.1 Primary Assembly 161196 na NODE_5_length_156791_cov_248.796387 unplaced-scaffold na na RQKF01000005.1 = NZ_RQKF01000005.1 Primary Assembly 156791 na NODE_6_length_146689_cov_102.300569 unplaced-scaffold na na RQKF01000006.1 = NZ_RQKF01000006.1 Primary Assembly 146689 na NODE_7_length_117649_cov_112.048073 unplaced-scaffold na na RQKF01000007.1 = NZ_RQKF01000007.1 Primary Assembly 117649 na NODE_8_length_114630_cov_178.295226 unplaced-scaffold na na RQKF01000008.1 = NZ_RQKF01000008.1 Primary Assembly 114630 na NODE_9_length_106954_cov_207.858566 unplaced-scaffold na na RQKF01000009.1 = NZ_RQKF01000009.1 Primary Assembly 106954 na NODE_10_length_90897_cov_85.861881 unplaced-scaffold na na RQKF01000010.1 = NZ_RQKF01000010.1 Primary Assembly 90897 na NODE_11_length_87544_cov_104.790527 unplaced-scaffold na na RQKF01000011.1 = NZ_RQKF01000011.1 Primary Assembly 87544 na NODE_12_length_85087_cov_132.058864 unplaced-scaffold na na RQKF01000012.1 = NZ_RQKF01000012.1 Primary Assembly 85087 na NODE_13_length_84512_cov_87.036537 unplaced-scaffold na na RQKF01000013.1 = NZ_RQKF01000013.1 Primary Assembly 84512 na NODE_15_length_79007_cov_122.672431 unplaced-scaffold na na RQKF01000015.1 = NZ_RQKF01000015.1 Primary Assembly 79007 na NODE_16_length_76323_cov_132.538874 unplaced-scaffold na na RQKF01000016.1 = NZ_RQKF01000016.1 Primary Assembly 76323 na NODE_17_length_74052_cov_97.970909 unplaced-scaffold na na RQKF01000017.1 = NZ_RQKF01000017.1 Primary Assembly 74052 na NODE_18_length_66435_cov_218.194732 unplaced-scaffold na na RQKF01000018.1 = NZ_RQKF01000018.1 Primary Assembly 66435 na NODE_19_length_64172_cov_97.384008 unplaced-scaffold na na RQKF01000019.1 = NZ_RQKF01000019.1 Primary Assembly 64172 na NODE_20_length_60433_cov_155.750630 unplaced-scaffold na na RQKF01000020.1 = NZ_RQKF01000020.1 Primary Assembly 60433 na NODE_21_length_59292_cov_222.856658 unplaced-scaffold na na RQKF01000021.1 = NZ_RQKF01000021.1 Primary Assembly 59292 na NODE_22_length_57430_cov_87.797081 unplaced-scaffold na na RQKF01000022.1 = NZ_RQKF01000022.1 Primary Assembly 57430 na NODE_23_length_57161_cov_248.680366 unplaced-scaffold na na RQKF01000023.1 = NZ_RQKF01000023.1 Primary Assembly 57161 na NODE_24_length_55386_cov_139.684373 unplaced-scaffold na na RQKF01000024.1 = NZ_RQKF01000024.1 Primary Assembly 55386 na NODE_25_length_54426_cov_118.331653 unplaced-scaffold na na RQKF01000025.1 = NZ_RQKF01000025.1 Primary Assembly 54426 na NODE_26_length_52263_cov_141.110451 unplaced-scaffold na na RQKF01000026.1 = NZ_RQKF01000026.1 Primary Assembly 52263 na NODE_27_length_48046_cov_249.159603 unplaced-scaffold na na RQKF01000027.1 = NZ_RQKF01000027.1 Primary Assembly 48046 na NODE_28_length_45526_cov_135.553125 unplaced-scaffold na na RQKF01000028.1 = NZ_RQKF01000028.1 Primary Assembly 45526 na NODE_30_length_43966_cov_125.706168 unplaced-scaffold na na RQKF01000030.1 = NZ_RQKF01000030.1 Primary Assembly 43966 na NODE_31_length_43624_cov_138.079340 unplaced-scaffold na na RQKF01000031.1 = NZ_RQKF01000031.1 Primary Assembly 43624 na NODE_32_length_42883_cov_165.455030 unplaced-scaffold na na RQKF01000032.1 = NZ_RQKF01000032.1 Primary Assembly 42883 na NODE_33_length_41473_cov_253.185960 unplaced-scaffold na na RQKF01000033.1 = NZ_RQKF01000033.1 Primary Assembly 41473 na NODE_34_length_40916_cov_170.677832 unplaced-scaffold na na RQKF01000034.1 = NZ_RQKF01000034.1 Primary Assembly 40916 na NODE_35_length_39740_cov_210.285556 unplaced-scaffold na na RQKF01000035.1 = NZ_RQKF01000035.1 Primary Assembly 39740 na NODE_36_length_39239_cov_114.392881 unplaced-scaffold na na RQKF01000036.1 = NZ_RQKF01000036.1 Primary Assembly 39239 na NODE_37_length_37951_cov_222.969715 unplaced-scaffold na na RQKF01000037.1 = NZ_RQKF01000037.1 Primary Assembly 37951 na NODE_38_length_36803_cov_126.085689 unplaced-scaffold na na RQKF01000038.1 = NZ_RQKF01000038.1 Primary Assembly 36803 na NODE_39_length_36609_cov_216.872961 unplaced-scaffold na na RQKF01000039.1 = NZ_RQKF01000039.1 Primary Assembly 36609 na NODE_40_length_35446_cov_122.212333 unplaced-scaffold na na RQKF01000040.1 = NZ_RQKF01000040.1 Primary Assembly 35446 na NODE_41_length_33415_cov_217.652859 unplaced-scaffold na na RQKF01000041.1 = NZ_RQKF01000041.1 Primary Assembly 33415 na NODE_42_length_33255_cov_167.426216 unplaced-scaffold na na RQKF01000042.1 = NZ_RQKF01000042.1 Primary Assembly 33255 na NODE_43_length_32883_cov_137.107236 unplaced-scaffold na na RQKF01000043.1 = NZ_RQKF01000043.1 Primary Assembly 32883 na NODE_44_length_31896_cov_148.065998 unplaced-scaffold na na RQKF01000044.1 = NZ_RQKF01000044.1 Primary Assembly 31896 na NODE_45_length_31171_cov_229.515244 unplaced-scaffold na na RQKF01000045.1 = NZ_RQKF01000045.1 Primary Assembly 31171 na NODE_46_length_30000_cov_281.931290 unplaced-scaffold na na RQKF01000046.1 = NZ_RQKF01000046.1 Primary Assembly 30000 na NODE_47_length_29794_cov_264.591682 unplaced-scaffold na na RQKF01000047.1 = NZ_RQKF01000047.1 Primary Assembly 29794 na NODE_49_length_28899_cov_126.604850 unplaced-scaffold na na RQKF01000049.1 = NZ_RQKF01000049.1 Primary Assembly 28899 na NODE_50_length_28366_cov_216.728021 unplaced-scaffold na na RQKF01000050.1 = NZ_RQKF01000050.1 Primary Assembly 28366 na NODE_51_length_27944_cov_240.976208 unplaced-scaffold na na RQKF01000051.1 = NZ_RQKF01000051.1 Primary Assembly 27944 na NODE_52_length_26371_cov_134.167262 unplaced-scaffold na na RQKF01000052.1 = NZ_RQKF01000052.1 Primary Assembly 26371 na NODE_53_length_26168_cov_207.536737 unplaced-scaffold na na RQKF01000053.1 = NZ_RQKF01000053.1 Primary Assembly 26168 na NODE_54_length_25875_cov_136.153500 unplaced-scaffold na na RQKF01000054.1 = NZ_RQKF01000054.1 Primary Assembly 25875 na NODE_55_length_24581_cov_114.432542 unplaced-scaffold na na RQKF01000055.1 = NZ_RQKF01000055.1 Primary Assembly 24581 na NODE_56_length_23395_cov_232.022772 unplaced-scaffold na na RQKF01000056.1 = NZ_RQKF01000056.1 Primary Assembly 23395 na NODE_57_length_23095_cov_117.506777 unplaced-scaffold na na RQKF01000057.1 = NZ_RQKF01000057.1 Primary Assembly 23095 na NODE_58_length_22039_cov_118.365814 unplaced-scaffold na na RQKF01000058.1 = NZ_RQKF01000058.1 Primary Assembly 22039 na NODE_59_length_21996_cov_211.477805 unplaced-scaffold na na RQKF01000059.1 = NZ_RQKF01000059.1 Primary Assembly 21996 na NODE_60_length_21643_cov_257.823565 unplaced-scaffold na na RQKF01000060.1 = NZ_RQKF01000060.1 Primary Assembly 21643 na NODE_61_length_21426_cov_185.063937 unplaced-scaffold na na RQKF01000061.1 = NZ_RQKF01000061.1 Primary Assembly 21426 na NODE_62_length_20548_cov_96.899809 unplaced-scaffold na na RQKF01000062.1 = NZ_RQKF01000062.1 Primary Assembly 20548 na NODE_63_length_20055_cov_207.008309 unplaced-scaffold na na RQKF01000063.1 = NZ_RQKF01000063.1 Primary Assembly 20055 na NODE_64_length_19606_cov_221.173178 unplaced-scaffold na na RQKF01000064.1 = NZ_RQKF01000064.1 Primary Assembly 19606 na NODE_65_length_19588_cov_236.223925 unplaced-scaffold na na RQKF01000065.1 = NZ_RQKF01000065.1 Primary Assembly 19588 na NODE_66_length_18517_cov_123.796421 unplaced-scaffold na na RQKF01000066.1 = NZ_RQKF01000066.1 Primary Assembly 18517 na NODE_67_length_18333_cov_252.965162 unplaced-scaffold na na RQKF01000067.1 = NZ_RQKF01000067.1 Primary Assembly 18333 na NODE_68_length_18116_cov_125.725761 unplaced-scaffold na na RQKF01000068.1 = NZ_RQKF01000068.1 Primary Assembly 18116 na NODE_69_length_18113_cov_94.663673 unplaced-scaffold na na RQKF01000069.1 = NZ_RQKF01000069.1 Primary Assembly 18113 na NODE_70_length_17405_cov_167.304190 unplaced-scaffold na na RQKF01000070.1 = NZ_RQKF01000070.1 Primary Assembly 17405 na NODE_71_length_15378_cov_220.580027 unplaced-scaffold na na RQKF01000071.1 = NZ_RQKF01000071.1 Primary Assembly 15378 na NODE_72_length_12723_cov_166.153408 unplaced-scaffold na na RQKF01000072.1 = NZ_RQKF01000072.1 Primary Assembly 12723 na NODE_73_length_12552_cov_118.224369 unplaced-scaffold na na RQKF01000073.1 = NZ_RQKF01000073.1 Primary Assembly 12552 na NODE_74_length_12155_cov_274.266269 unplaced-scaffold na na RQKF01000074.1 = NZ_RQKF01000074.1 Primary Assembly 12155 na NODE_75_length_10874_cov_146.227748 unplaced-scaffold na na RQKF01000075.1 = NZ_RQKF01000075.1 Primary Assembly 10874 na NODE_76_length_10761_cov_224.069918 unplaced-scaffold na na RQKF01000076.1 = NZ_RQKF01000076.1 Primary Assembly 10761 na NODE_77_length_10478_cov_236.107586 unplaced-scaffold na na RQKF01000077.1 = NZ_RQKF01000077.1 Primary Assembly 10478 na NODE_78_length_10426_cov_104.688569 unplaced-scaffold na na RQKF01000078.1 = NZ_RQKF01000078.1 Primary Assembly 10426 na NODE_79_length_10095_cov_203.639848 unplaced-scaffold na na RQKF01000079.1 = NZ_RQKF01000079.1 Primary Assembly 10095 na NODE_80_length_10077_cov_91.108500 unplaced-scaffold na na RQKF01000080.1 = NZ_RQKF01000080.1 Primary Assembly 10077 na NODE_81_length_10044_cov_275.454500 unplaced-scaffold na na RQKF01000081.1 = NZ_RQKF01000081.1 Primary Assembly 10044 na NODE_82_length_9026_cov_218.834171 unplaced-scaffold na na RQKF01000082.1 = NZ_RQKF01000082.1 Primary Assembly 9026 na NODE_83_length_8928_cov_169.052649 unplaced-scaffold na na RQKF01000083.1 = NZ_RQKF01000083.1 Primary Assembly 8928 na NODE_84_length_8728_cov_219.852271 unplaced-scaffold na na RQKF01000084.1 = NZ_RQKF01000084.1 Primary Assembly 8728 na NODE_85_length_8448_cov_164.476407 unplaced-scaffold na na RQKF01000085.1 = NZ_RQKF01000085.1 Primary Assembly 8448 na NODE_86_length_8296_cov_205.991118 unplaced-scaffold na na RQKF01000086.1 = NZ_RQKF01000086.1 Primary Assembly 8296 na NODE_87_length_8106_cov_87.947690 unplaced-scaffold na na RQKF01000087.1 = NZ_RQKF01000087.1 Primary Assembly 8106 na NODE_88_length_7831_cov_225.201960 unplaced-scaffold na na RQKF01000088.1 = NZ_RQKF01000088.1 Primary Assembly 7831 na NODE_89_length_5946_cov_201.836088 unplaced-scaffold na na RQKF01000089.1 = NZ_RQKF01000089.1 Primary Assembly 5946 na NODE_90_length_5201_cov_255.151639 unplaced-scaffold na na RQKF01000090.1 = NZ_RQKF01000090.1 Primary Assembly 5201 na NODE_91_length_5077_cov_168.636200 unplaced-scaffold na na RQKF01000091.1 = NZ_RQKF01000091.1 Primary Assembly 5077 na NODE_92_length_4794_cov_242.079500 unplaced-scaffold na na RQKF01000092.1 = NZ_RQKF01000092.1 Primary Assembly 4794 na NODE_93_length_4722_cov_95.345697 unplaced-scaffold na na RQKF01000093.1 = NZ_RQKF01000093.1 Primary Assembly 4722 na NODE_94_length_4647_cov_192.206783 unplaced-scaffold na na RQKF01000094.1 = NZ_RQKF01000094.1 Primary Assembly 4647 na NODE_95_length_4308_cov_135.701253 unplaced-scaffold na na RQKF01000095.1 = NZ_RQKF01000095.1 Primary Assembly 4308 na NODE_96_length_4237_cov_145.499279 unplaced-scaffold na na RQKF01000096.1 = NZ_RQKF01000096.1 Primary Assembly 4237 na NODE_97_length_4128_cov_184.566033 unplaced-scaffold na na RQKF01000097.1 = NZ_RQKF01000097.1 Primary Assembly 4128 na NODE_98_length_3317_cov_86.565741 unplaced-scaffold na na RQKF01000098.1 = NZ_RQKF01000098.1 Primary Assembly 3317 na NODE_99_length_3312_cov_260.321175 unplaced-scaffold na na RQKF01000099.1 = NZ_RQKF01000099.1 Primary Assembly 3312 na NODE_101_length_2915_cov_2483.889006 unplaced-scaffold na na RQKF01000100.1 = NZ_RQKF01000100.1 Primary Assembly 2915 na NODE_102_length_2812_cov_176.634369 unplaced-scaffold na na RQKF01000101.1 = NZ_RQKF01000101.1 Primary Assembly 2812 na NODE_103_length_2796_cov_137.061787 unplaced-scaffold na na RQKF01000102.1 = NZ_RQKF01000102.1 Primary Assembly 2796 na NODE_104_length_2106_cov_133.719566 unplaced-scaffold na na RQKF01000103.1 = NZ_RQKF01000103.1 Primary Assembly 2106 na NODE_105_length_2091_cov_190.969215 unplaced-scaffold na na RQKF01000104.1 = NZ_RQKF01000104.1 Primary Assembly 2091 na NODE_107_length_1963_cov_166.213150 unplaced-scaffold na na RQKF01000105.1 = NZ_RQKF01000105.1 Primary Assembly 1963 na NODE_108_length_1864_cov_6340.197538 unplaced-scaffold na na RQKF01000106.1 = NZ_RQKF01000106.1 Primary Assembly 1864 na NODE_112_length_1600_cov_631.114248 unplaced-scaffold na na RQKF01000107.1 = NZ_RQKF01000107.1 Primary Assembly 1600 na NODE_113_length_1597_cov_486.859868 unplaced-scaffold na na RQKF01000108.1 = NZ_RQKF01000108.1 Primary Assembly 1597 na NODE_114_length_1591_cov_233.290621 unplaced-scaffold na na RQKF01000109.1 = NZ_RQKF01000109.1 Primary Assembly 1591 na NODE_116_length_1511_cov_360.757322 unplaced-scaffold na na RQKF01000110.1 = NZ_RQKF01000110.1 Primary Assembly 1511 na NODE_118_length_1459_cov_621.871925 unplaced-scaffold na na RQKF01000111.1 = NZ_RQKF01000111.1 Primary Assembly 1459 na NODE_119_length_1380_cov_444.778204 unplaced-scaffold na na RQKF01000112.1 = NZ_RQKF01000112.1 Primary Assembly 1380 na NODE_121_length_1337_cov_185.826190 unplaced-scaffold na na RQKF01000113.1 = NZ_RQKF01000113.1 Primary Assembly 1337 na NODE_124_length_1268_cov_373.454240 unplaced-scaffold na na RQKF01000114.1 = NZ_RQKF01000114.1 Primary Assembly 1268 na NODE_126_length_1254_cov_176.971963 unplaced-scaffold na na RQKF01000115.1 = NZ_RQKF01000115.1 Primary Assembly 1254 na NODE_131_length_1185_cov_2356.854693 unplaced-scaffold na na RQKF01000116.1 = NZ_RQKF01000116.1 Primary Assembly 1185 na NODE_132_length_1172_cov_262.031050 unplaced-scaffold na na RQKF01000117.1 = NZ_RQKF01000117.1 Primary Assembly 1172 na NODE_137_length_1042_cov_506.480829 unplaced-scaffold na na RQKF01000118.1 = NZ_RQKF01000118.1 Primary Assembly 1042 na NODE_138_length_1030_cov_629.941238 unplaced-scaffold na na RQKF01000119.1 = NZ_RQKF01000119.1 Primary Assembly 1030 na