# Assembly name: ASM393429v1 # Organism name: Dickeya lacustris (enterobacteria) # Infraspecific name: strain=S29 # Taxid: 2259638 # BioSample: SAMN09603982 # BioProject: PRJNA479749 # Submitter: Universite Claude Bernard Lyon 1 # Date: 2018-12-11 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: QNUT01 # Assembly method: SPAdes v. 3.11.1 # Expected final version: no # Genome coverage: 225.0x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003934295.1 # RefSeq assembly accession: GCF_003934295.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003934315.1 GCF_003934315.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_44_length_6482_cov_94.800471 unplaced-scaffold na na QNUT01000001.1 = NZ_QNUT01000001.1 Primary Assembly 6482 na NODE_13_length_121964_cov_101.355438 unplaced-scaffold na na QNUT01000002.1 = NZ_QNUT01000002.1 Primary Assembly 121964 na NODE_51_length_4480_cov_155.500573 unplaced-scaffold na na QNUT01000003.1 = NZ_QNUT01000003.1 Primary Assembly 4480 na NODE_33_length_31841_cov_110.897144 unplaced-scaffold na na QNUT01000004.1 = NZ_QNUT01000004.1 Primary Assembly 31841 na NODE_53_length_3106_cov_1143.873536 unplaced-scaffold na na QNUT01000005.1 = NZ_QNUT01000005.1 Primary Assembly 3106 na NODE_22_length_77693_cov_104.565059 unplaced-scaffold na na QNUT01000006.1 = NZ_QNUT01000006.1 Primary Assembly 77693 na NODE_16_length_112556_cov_108.305410 unplaced-scaffold na na QNUT01000007.1 = NZ_QNUT01000007.1 Primary Assembly 112556 na NODE_57_length_1430_cov_152.296268 unplaced-scaffold na na QNUT01000008.1 = NZ_QNUT01000008.1 Primary Assembly 1430 na NODE_38_length_13797_cov_166.175219 unplaced-scaffold na na QNUT01000009.1 = NZ_QNUT01000009.1 Primary Assembly 13797 na NODE_64_length_1049_cov_176.209227 unplaced-scaffold na na QNUT01000010.1 = NZ_QNUT01000010.1 Primary Assembly 1049 na NODE_73_length_620_cov_100.204771 unplaced-scaffold na na QNUT01000011.1 = NZ_QNUT01000011.1 Primary Assembly 620 na NODE_66_length_833_cov_249.263966 unplaced-scaffold na na QNUT01000012.1 = NZ_QNUT01000012.1 Primary Assembly 833 na NODE_36_length_14003_cov_112.201930 unplaced-scaffold na na QNUT01000013.1 = NZ_QNUT01000013.1 Primary Assembly 14003 na NODE_27_length_62495_cov_99.532672 unplaced-scaffold na na QNUT01000014.1 = NZ_QNUT01000014.1 Primary Assembly 62495 na NODE_9_length_136364_cov_114.675897 unplaced-scaffold na na QNUT01000015.1 = NZ_QNUT01000015.1 Primary Assembly 136364 na NODE_12_length_124792_cov_107.508554 unplaced-scaffold na na QNUT01000016.1 = NZ_QNUT01000016.1 Primary Assembly 124792 na NODE_8_length_137398_cov_110.863375 unplaced-scaffold na na QNUT01000017.1 = NZ_QNUT01000017.1 Primary Assembly 137398 na NODE_30_length_48177_cov_108.032189 unplaced-scaffold na na QNUT01000018.1 = NZ_QNUT01000018.1 Primary Assembly 48177 na NODE_21_length_84907_cov_123.155266 unplaced-scaffold na na QNUT01000019.1 = NZ_QNUT01000019.1 Primary Assembly 84907 na NODE_2_length_331682_cov_118.300572 unplaced-scaffold na na QNUT01000020.1 = NZ_QNUT01000020.1 Primary Assembly 331682 na NODE_32_length_43689_cov_112.106077 unplaced-scaffold na na QNUT01000021.1 = NZ_QNUT01000021.1 Primary Assembly 43689 na NODE_4_length_242909_cov_111.404807 unplaced-scaffold na na QNUT01000022.1 = NZ_QNUT01000022.1 Primary Assembly 242909 na NODE_10_length_133638_cov_102.310049 unplaced-scaffold na na QNUT01000023.1 = NZ_QNUT01000023.1 Primary Assembly 133638 na NODE_71_length_652_cov_0.925234 unplaced-scaffold na na QNUT01000024.1 = NZ_QNUT01000024.1 Primary Assembly 652 na NODE_18_length_89989_cov_105.361915 unplaced-scaffold na na QNUT01000025.1 = NZ_QNUT01000025.1 Primary Assembly 89989 na NODE_80_length_482_cov_2.868493 unplaced-scaffold na na QNUT01000026.1 = NZ_QNUT01000026.1 Primary Assembly 482 na NODE_41_length_9139_cov_19.986367 unplaced-scaffold na na QNUT01000027.1 = NZ_QNUT01000027.1 Primary Assembly 9139 na NODE_45_length_6169_cov_170.727363 unplaced-scaffold na na QNUT01000028.1 = NZ_QNUT01000028.1 Primary Assembly 6169 na NODE_25_length_68877_cov_104.628490 unplaced-scaffold na na QNUT01000029.1 = NZ_QNUT01000029.1 Primary Assembly 68877 na NODE_14_length_121809_cov_118.899583 unplaced-scaffold na na QNUT01000030.1 = NZ_QNUT01000030.1 Primary Assembly 121809 na NODE_26_length_63131_cov_112.277653 unplaced-scaffold na na QNUT01000031.1 = NZ_QNUT01000031.1 Primary Assembly 63131 na NODE_19_length_85598_cov_119.329079 unplaced-scaffold na na QNUT01000032.1 = NZ_QNUT01000032.1 Primary Assembly 85598 na NODE_43_length_6510_cov_79.664477 unplaced-scaffold na na QNUT01000033.1 = NZ_QNUT01000033.1 Primary Assembly 6510 na NODE_62_length_1180_cov_212.562559 unplaced-scaffold na na QNUT01000034.1 = NZ_QNUT01000034.1 Primary Assembly 1180 na NODE_7_length_137528_cov_117.055978 unplaced-scaffold na na QNUT01000035.1 = NZ_QNUT01000035.1 Primary Assembly 137528 na NODE_75_length_573_cov_105.212719 unplaced-scaffold na na QNUT01000036.1 = NZ_QNUT01000036.1 Primary Assembly 573 na NODE_42_length_7034_cov_94.523493 unplaced-scaffold na na QNUT01000037.1 = NZ_QNUT01000037.1 Primary Assembly 7034 na NODE_31_length_44830_cov_100.620916 unplaced-scaffold na na QNUT01000038.1 = NZ_QNUT01000038.1 Primary Assembly 44830 na NODE_23_length_76742_cov_90.264731 unplaced-scaffold na na QNUT01000039.1 = NZ_QNUT01000039.1 Primary Assembly 76742 na NODE_17_length_91091_cov_88.800031 unplaced-scaffold na na QNUT01000040.1 = NZ_QNUT01000040.1 Primary Assembly 91091 na NODE_47_length_5551_cov_99.521899 unplaced-scaffold na na QNUT01000041.1 = NZ_QNUT01000041.1 Primary Assembly 5551 na NODE_37_length_13890_cov_76.344297 unplaced-scaffold na na QNUT01000042.1 = NZ_QNUT01000042.1 Primary Assembly 13890 na NODE_29_length_57465_cov_80.441811 unplaced-scaffold na na QNUT01000043.1 = NZ_QNUT01000043.1 Primary Assembly 57465 na NODE_46_length_6119_cov_128.721926 unplaced-scaffold na na QNUT01000044.1 = NZ_QNUT01000044.1 Primary Assembly 6119 na NODE_28_length_61534_cov_133.748815 unplaced-scaffold na na QNUT01000045.1 = NZ_QNUT01000045.1 Primary Assembly 61534 na NODE_6_length_179491_cov_99.970949 unplaced-scaffold na na QNUT01000046.1 = NZ_QNUT01000046.1 Primary Assembly 179491 na NODE_35_length_14202_cov_140.962371 unplaced-scaffold na na QNUT01000047.1 = NZ_QNUT01000047.1 Primary Assembly 14202 na NODE_49_length_4816_cov_102.727602 unplaced-scaffold na na QNUT01000048.1 = NZ_QNUT01000048.1 Primary Assembly 4816 na NODE_20_length_85238_cov_108.788266 unplaced-scaffold na na QNUT01000049.1 = NZ_QNUT01000049.1 Primary Assembly 85238 na NODE_40_length_10067_cov_103.390452 unplaced-scaffold na na QNUT01000050.1 = NZ_QNUT01000050.1 Primary Assembly 10067 na NODE_11_length_130636_cov_121.015155 unplaced-scaffold na na QNUT01000051.1 = NZ_QNUT01000051.1 Primary Assembly 130636 na NODE_59_length_1208_cov_397.824015 unplaced-scaffold na na QNUT01000052.1 = NZ_QNUT01000052.1 Primary Assembly 1208 na NODE_24_length_68998_cov_97.861704 unplaced-scaffold na na QNUT01000053.1 = NZ_QNUT01000053.1 Primary Assembly 68998 na NODE_1_length_460991_cov_101.540072 unplaced-scaffold na na QNUT01000054.1 = NZ_QNUT01000054.1 Primary Assembly 460991 na NODE_34_length_25375_cov_166.660226 unplaced-scaffold na na QNUT01000055.1 = NZ_QNUT01000055.1 Primary Assembly 25375 na NODE_5_length_208401_cov_103.181502 unplaced-scaffold na na QNUT01000056.1 = NZ_QNUT01000056.1 Primary Assembly 208401 na NODE_3_length_250100_cov_97.916910 unplaced-scaffold na na QNUT01000057.1 = NZ_QNUT01000057.1 Primary Assembly 250100 na NODE_15_length_118966_cov_101.394669 unplaced-scaffold na na QNUT01000058.1 = NZ_QNUT01000058.1 Primary Assembly 118966 na NODE_39_length_11498_cov_170.417187 unplaced-scaffold na na QNUT01000059.1 = NZ_QNUT01000059.1 Primary Assembly 11498 na NODE_48_length_5462_cov_92.992142 unplaced-scaffold na na QNUT01000060.1 = NZ_QNUT01000060.1 Primary Assembly 5462 na NODE_50_length_4513_cov_86.700409 unplaced-scaffold na na QNUT01000061.1 = NZ_QNUT01000061.1 Primary Assembly 4513 na NODE_52_length_3463_cov_42.798565 unplaced-scaffold na na QNUT01000062.1 = NZ_QNUT01000062.1 Primary Assembly 3463 na NODE_54_length_1777_cov_1228.321084 unplaced-scaffold na na QNUT01000063.1 = NZ_QNUT01000063.1 Primary Assembly 1777 na NODE_55_length_1649_cov_110.595300 unplaced-scaffold na na QNUT01000064.1 = NZ_QNUT01000064.1 Primary Assembly 1649 na NODE_56_length_1614_cov_123.302605 unplaced-scaffold na na QNUT01000065.1 = NZ_QNUT01000065.1 Primary Assembly 1614 na NODE_58_length_1287_cov_309.313675 unplaced-scaffold na na QNUT01000066.1 = NZ_QNUT01000066.1 Primary Assembly 1287 na NODE_60_length_1196_cov_1279.761816 unplaced-scaffold na na QNUT01000067.1 = NZ_QNUT01000067.1 Primary Assembly 1196 na NODE_61_length_1185_cov_259.138577 unplaced-scaffold na na QNUT01000068.1 = NZ_QNUT01000068.1 Primary Assembly 1185 na NODE_63_length_1059_cov_195.115711 unplaced-scaffold na na QNUT01000069.1 = NZ_QNUT01000069.1 Primary Assembly 1059 na NODE_65_length_1009_cov_28.090807 unplaced-scaffold na na QNUT01000070.1 = NZ_QNUT01000070.1 Primary Assembly 1009 na NODE_67_length_824_cov_29.780764 unplaced-scaffold na na QNUT01000071.1 = NZ_QNUT01000071.1 Primary Assembly 824 na NODE_68_length_772_cov_32.903817 unplaced-scaffold na na QNUT01000072.1 = NZ_QNUT01000072.1 Primary Assembly 772 na NODE_69_length_685_cov_59.154930 unplaced-scaffold na na QNUT01000073.1 = NZ_QNUT01000073.1 Primary Assembly 685 na NODE_70_length_657_cov_0.994444 unplaced-scaffold na na QNUT01000074.1 = NZ_QNUT01000074.1 Primary Assembly 657 na NODE_72_length_622_cov_80.483168 unplaced-scaffold na na QNUT01000075.1 = NZ_QNUT01000075.1 Primary Assembly 622 na NODE_74_length_620_cov_83.669980 unplaced-scaffold na na QNUT01000076.1 = NZ_QNUT01000076.1 Primary Assembly 620 na NODE_76_length_551_cov_688.619816 unplaced-scaffold na na QNUT01000077.1 = NZ_QNUT01000077.1 Primary Assembly 551 na NODE_77_length_515_cov_1.072864 unplaced-scaffold na na QNUT01000078.1 = NZ_QNUT01000078.1 Primary Assembly 515 na NODE_78_length_508_cov_0.820972 unplaced-scaffold na na QNUT01000079.1 = NZ_QNUT01000079.1 Primary Assembly 508 na NODE_79_length_496_cov_0.820580 unplaced-scaffold na na QNUT01000080.1 = NZ_QNUT01000080.1 Primary Assembly 496 na NODE_81_length_475_cov_0.812849 unplaced-scaffold na na QNUT01000081.1 = NZ_QNUT01000081.1 Primary Assembly 475 na NODE_82_length_473_cov_0.845506 unplaced-scaffold na na QNUT01000082.1 = NZ_QNUT01000082.1 Primary Assembly 473 na NODE_83_length_472_cov_417.447887 unplaced-scaffold na na QNUT01000083.1 = NZ_QNUT01000083.1 Primary Assembly 472 na NODE_84_length_471_cov_808.734463 unplaced-scaffold na na QNUT01000084.1 = NZ_QNUT01000084.1 Primary Assembly 471 na NODE_85_length_459_cov_1.064327 unplaced-scaffold na na QNUT01000085.1 = NZ_QNUT01000085.1 Primary Assembly 459 na NODE_86_length_459_cov_0.824561 unplaced-scaffold na na QNUT01000086.1 = NZ_QNUT01000086.1 Primary Assembly 459 na NODE_87_length_455_cov_1.005917 unplaced-scaffold na na QNUT01000087.1 = NZ_QNUT01000087.1 Primary Assembly 455 na NODE_88_length_453_cov_0.937500 unplaced-scaffold na na QNUT01000088.1 = NZ_QNUT01000088.1 Primary Assembly 453 na NODE_89_length_450_cov_1.027027 unplaced-scaffold na na QNUT01000089.1 = NZ_QNUT01000089.1 Primary Assembly 450 na NODE_90_length_447_cov_1.112121 unplaced-scaffold na na QNUT01000090.1 = NZ_QNUT01000090.1 Primary Assembly 447 na NODE_91_length_444_cov_0.957187 unplaced-scaffold na na QNUT01000091.1 = NZ_QNUT01000091.1 Primary Assembly 444 na NODE_92_length_443_cov_1.015337 unplaced-scaffold na na QNUT01000092.1 = NZ_QNUT01000092.1 Primary Assembly 443 na NODE_93_length_443_cov_0.892638 unplaced-scaffold na na QNUT01000093.1 = NZ_QNUT01000093.1 Primary Assembly 443 na NODE_94_length_439_cov_0.987578 unplaced-scaffold na na QNUT01000094.1 = NZ_QNUT01000094.1 Primary Assembly 439 na NODE_95_length_433_cov_1.360759 unplaced-scaffold na na QNUT01000095.1 = NZ_QNUT01000095.1 Primary Assembly 433 na NODE_96_length_433_cov_0.908228 unplaced-scaffold na na QNUT01000096.1 = NZ_QNUT01000096.1 Primary Assembly 433 na NODE_97_length_432_cov_0.771429 unplaced-scaffold na na QNUT01000097.1 = NZ_QNUT01000097.1 Primary Assembly 432 na NODE_98_length_429_cov_0.945513 unplaced-scaffold na na QNUT01000098.1 = NZ_QNUT01000098.1 Primary Assembly 429 na NODE_99_length_429_cov_0.804487 unplaced-scaffold na na QNUT01000099.1 = NZ_QNUT01000099.1 Primary Assembly 429 na NODE_100_length_424_cov_9.719870 unplaced-scaffold na na QNUT01000100.1 = NZ_QNUT01000100.1 Primary Assembly 424 na NODE_101_length_422_cov_0.878689 unplaced-scaffold na na QNUT01000101.1 = NZ_QNUT01000101.1 Primary Assembly 422 na NODE_102_length_421_cov_1.210526 unplaced-scaffold na na QNUT01000102.1 = NZ_QNUT01000102.1 Primary Assembly 421 na NODE_103_length_421_cov_0.986842 unplaced-scaffold na na QNUT01000103.1 = NZ_QNUT01000103.1 Primary Assembly 421 na NODE_104_length_421_cov_0.921053 unplaced-scaffold na na QNUT01000104.1 = NZ_QNUT01000104.1 Primary Assembly 421 na NODE_105_length_344_cov_521.625551 unplaced-scaffold na na QNUT01000105.1 = NZ_QNUT01000105.1 Primary Assembly 344 na NODE_106_length_342_cov_97.337778 unplaced-scaffold na na QNUT01000106.1 = NZ_QNUT01000106.1 Primary Assembly 342 na NODE_107_length_338_cov_21.846154 unplaced-scaffold na na QNUT01000107.1 = NZ_QNUT01000107.1 Primary Assembly 338 na NODE_108_length_292_cov_216.257143 unplaced-scaffold na na QNUT01000108.1 = NZ_QNUT01000108.1 Primary Assembly 292 na NODE_109_length_290_cov_460.612717 unplaced-scaffold na na QNUT01000109.1 = NZ_QNUT01000109.1 Primary Assembly 290 na NODE_110_length_250_cov_953.744361 unplaced-scaffold na na QNUT01000110.1 = NZ_QNUT01000110.1 Primary Assembly 250 na NODE_111_length_231_cov_70.280702 unplaced-scaffold na na QNUT01000111.1 = NZ_QNUT01000111.1 Primary Assembly 231 na NODE_112_length_230_cov_105.238938 unplaced-scaffold na na QNUT01000112.1 = NZ_QNUT01000112.1 Primary Assembly 230 na NODE_113_length_221_cov_19.413462 unplaced-scaffold na na QNUT01000113.1 = NZ_QNUT01000113.1 Primary Assembly 221 na NODE_114_length_220_cov_258.300971 unplaced-scaffold na na QNUT01000114.1 = NZ_QNUT01000114.1 Primary Assembly 220 na NODE_115_length_220_cov_152.873786 unplaced-scaffold na na QNUT01000115.1 = NZ_QNUT01000115.1 Primary Assembly 220 na NODE_116_length_219_cov_660.470588 unplaced-scaffold na na QNUT01000116.1 = NZ_QNUT01000116.1 Primary Assembly 219 na NODE_117_length_210_cov_476.150538 unplaced-scaffold na na QNUT01000117.1 = NZ_QNUT01000117.1 Primary Assembly 210 na NODE_118_length_201_cov_167.369048 unplaced-scaffold na na QNUT01000118.1 = NZ_QNUT01000118.1 Primary Assembly 201 na