# Assembly name: ASM399064v1 # Organism name: Shimia sediminis (a-proteobacteria) # Infraspecific name: strain=ZQ172 # Taxid: 2497945 # BioSample: SAMN10617556 # BioProject: PRJNA510881 # Submitter: Zhejiang University # Date: 2019-01-02 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: RYZK01 # Assembly method: SOAPdenovo v. 1.05 # Expected final version: yes # Genome coverage: 260.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003990645.1 # RefSeq assembly accession: GCF_003990645.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003990655.1 GCF_003990655.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 unplaced-scaffold na na RYZK01000001.1 = NZ_RYZK01000001.1 Primary Assembly 906594 na Scaffold2 unplaced-scaffold na na RYZK01000002.1 = NZ_RYZK01000002.1 Primary Assembly 709441 na Scaffold3 unplaced-scaffold na na RYZK01000003.1 = NZ_RYZK01000003.1 Primary Assembly 416786 na Scaffold4 unplaced-scaffold na na RYZK01000004.1 = NZ_RYZK01000004.1 Primary Assembly 412229 na Scaffold5 unplaced-scaffold na na RYZK01000005.1 = NZ_RYZK01000005.1 Primary Assembly 299310 na Scaffold6 unplaced-scaffold na na RYZK01000006.1 = NZ_RYZK01000006.1 Primary Assembly 193434 na Scaffold7 unplaced-scaffold na na RYZK01000007.1 = NZ_RYZK01000007.1 Primary Assembly 179701 na Scaffold8 unplaced-scaffold na na RYZK01000008.1 = NZ_RYZK01000008.1 Primary Assembly 173010 na Scaffold9 unplaced-scaffold na na RYZK01000009.1 = NZ_RYZK01000009.1 Primary Assembly 160930 na Scaffold10 unplaced-scaffold na na RYZK01000010.1 = NZ_RYZK01000010.1 Primary Assembly 159984 na Scaffold11 unplaced-scaffold na na RYZK01000011.1 = NZ_RYZK01000011.1 Primary Assembly 129237 na Scaffold12 unplaced-scaffold na na RYZK01000012.1 = NZ_RYZK01000012.1 Primary Assembly 114776 na Scaffold13 unplaced-scaffold na na RYZK01000013.1 = NZ_RYZK01000013.1 Primary Assembly 86399 na Scaffold14 unplaced-scaffold na na RYZK01000014.1 = NZ_RYZK01000014.1 Primary Assembly 69688 na Scaffold15 unplaced-scaffold na na RYZK01000015.1 = NZ_RYZK01000015.1 Primary Assembly 69430 na Scaffold16 unplaced-scaffold na na RYZK01000016.1 = NZ_RYZK01000016.1 Primary Assembly 64072 na Scaffold17 unplaced-scaffold na na RYZK01000017.1 = NZ_RYZK01000017.1 Primary Assembly 49280 na Scaffold18 unplaced-scaffold na na RYZK01000018.1 = NZ_RYZK01000018.1 Primary Assembly 37809 na Scaffold19 unplaced-scaffold na na RYZK01000019.1 = NZ_RYZK01000019.1 Primary Assembly 15960 na Scaffold20 unplaced-scaffold na na RYZK01000020.1 = NZ_RYZK01000020.1 Primary Assembly 14156 na Scaffold21 unplaced-scaffold na na RYZK01000021.1 = NZ_RYZK01000021.1 Primary Assembly 8187 na Scaffold22 unplaced-scaffold na na RYZK01000022.1 = NZ_RYZK01000022.1 Primary Assembly 6267 na Scaffold23 unplaced-scaffold na na RYZK01000023.1 = NZ_RYZK01000023.1 Primary Assembly 6244 na Scaffold24 unplaced-scaffold na na RYZK01000024.1 = NZ_RYZK01000024.1 Primary Assembly 2253 na Scaffold25 unplaced-scaffold na na RYZK01000025.1 = NZ_RYZK01000025.1 Primary Assembly 1997 na Scaffold26 unplaced-scaffold na na RYZK01000026.1 = NZ_RYZK01000026.1 Primary Assembly 1808 na Scaffold27 unplaced-scaffold na na RYZK01000027.1 = NZ_RYZK01000027.1 Primary Assembly 1741 na Scaffold28 unplaced-scaffold na na RYZK01000028.1 = NZ_RYZK01000028.1 Primary Assembly 1656 na Scaffold29 unplaced-scaffold na na RYZK01000029.1 = NZ_RYZK01000029.1 Primary Assembly 1604 na Scaffold30 unplaced-scaffold na na RYZK01000030.1 = NZ_RYZK01000030.1 Primary Assembly 1578 na Scaffold31 unplaced-scaffold na na RYZK01000031.1 = NZ_RYZK01000031.1 Primary Assembly 1267 na Scaffold32 unplaced-scaffold na na RYZK01000032.1 = NZ_RYZK01000032.1 Primary Assembly 1344 na Scaffold33 unplaced-scaffold na na RYZK01000033.1 = NZ_RYZK01000033.1 Primary Assembly 1324 na Scaffold34 unplaced-scaffold na na RYZK01000034.1 = NZ_RYZK01000034.1 Primary Assembly 1321 na Scaffold35 unplaced-scaffold na na RYZK01000035.1 = NZ_RYZK01000035.1 Primary Assembly 1130 na Scaffold36 unplaced-scaffold na na RYZK01000036.1 = NZ_RYZK01000036.1 Primary Assembly 1126 na Scaffold37 unplaced-scaffold na na RYZK01000037.1 = NZ_RYZK01000037.1 Primary Assembly 1108 na Scaffold38 unplaced-scaffold na na RYZK01000038.1 = NZ_RYZK01000038.1 Primary Assembly 1104 na Scaffold39 unplaced-scaffold na na RYZK01000039.1 = NZ_RYZK01000039.1 Primary Assembly 1031 na Scaffold40 unplaced-scaffold na na RYZK01000040.1 = NZ_RYZK01000040.1 Primary Assembly 1029 na Scaffold41 unplaced-scaffold na na RYZK01000041.1 = NZ_RYZK01000041.1 Primary Assembly 1013 na Scaffold42 unplaced-scaffold na na RYZK01000042.1 = NZ_RYZK01000042.1 Primary Assembly 1008 na Scaffold43 unplaced-scaffold na na RYZK01000043.1 = NZ_RYZK01000043.1 Primary Assembly 968 na Scaffold44 unplaced-scaffold na na RYZK01000044.1 = NZ_RYZK01000044.1 Primary Assembly 962 na Scaffold45 unplaced-scaffold na na RYZK01000045.1 = NZ_RYZK01000045.1 Primary Assembly 928 na Scaffold46 unplaced-scaffold na na RYZK01000046.1 = NZ_RYZK01000046.1 Primary Assembly 907 na Scaffold47 unplaced-scaffold na na RYZK01000047.1 = NZ_RYZK01000047.1 Primary Assembly 901 na Scaffold48 unplaced-scaffold na na RYZK01000048.1 = NZ_RYZK01000048.1 Primary Assembly 898 na Scaffold49 unplaced-scaffold na na RYZK01000049.1 = NZ_RYZK01000049.1 Primary Assembly 896 na Scaffold50 unplaced-scaffold na na RYZK01000050.1 = NZ_RYZK01000050.1 Primary Assembly 880 na Scaffold51 unplaced-scaffold na na RYZK01000051.1 = NZ_RYZK01000051.1 Primary Assembly 860 na Scaffold52 unplaced-scaffold na na RYZK01000052.1 = NZ_RYZK01000052.1 Primary Assembly 859 na Scaffold53 unplaced-scaffold na na RYZK01000053.1 = NZ_RYZK01000053.1 Primary Assembly 855 na Scaffold54 unplaced-scaffold na na RYZK01000054.1 = NZ_RYZK01000054.1 Primary Assembly 841 na Scaffold55 unplaced-scaffold na na RYZK01000055.1 = NZ_RYZK01000055.1 Primary Assembly 839 na Scaffold56 unplaced-scaffold na na RYZK01000056.1 = NZ_RYZK01000056.1 Primary Assembly 832 na Scaffold57 unplaced-scaffold na na RYZK01000057.1 = NZ_RYZK01000057.1 Primary Assembly 830 na Scaffold58 unplaced-scaffold na na RYZK01000058.1 = NZ_RYZK01000058.1 Primary Assembly 828 na Scaffold59 unplaced-scaffold na na RYZK01000059.1 = NZ_RYZK01000059.1 Primary Assembly 814 na Scaffold60 unplaced-scaffold na na RYZK01000060.1 = NZ_RYZK01000060.1 Primary Assembly 812 na Scaffold61 unplaced-scaffold na na RYZK01000061.1 = NZ_RYZK01000061.1 Primary Assembly 809 na Scaffold62 unplaced-scaffold na na RYZK01000062.1 = NZ_RYZK01000062.1 Primary Assembly 801 na Scaffold63 unplaced-scaffold na na RYZK01000063.1 = NZ_RYZK01000063.1 Primary Assembly 797 na Scaffold64 unplaced-scaffold na na RYZK01000064.1 = NZ_RYZK01000064.1 Primary Assembly 776 na Scaffold65 unplaced-scaffold na na RYZK01000065.1 = NZ_RYZK01000065.1 Primary Assembly 775 na Scaffold66 unplaced-scaffold na na RYZK01000066.1 = NZ_RYZK01000066.1 Primary Assembly 771 na Scaffold67 unplaced-scaffold na na RYZK01000067.1 = NZ_RYZK01000067.1 Primary Assembly 770 na Scaffold68 unplaced-scaffold na na RYZK01000068.1 = NZ_RYZK01000068.1 Primary Assembly 763 na Scaffold69 unplaced-scaffold na na RYZK01000069.1 = NZ_RYZK01000069.1 Primary Assembly 762 na Scaffold70 unplaced-scaffold na na RYZK01000070.1 = NZ_RYZK01000070.1 Primary Assembly 757 na Scaffold71 unplaced-scaffold na na RYZK01000071.1 = NZ_RYZK01000071.1 Primary Assembly 753 na Scaffold72 unplaced-scaffold na na RYZK01000072.1 = NZ_RYZK01000072.1 Primary Assembly 736 na Scaffold73 unplaced-scaffold na na RYZK01000073.1 = NZ_RYZK01000073.1 Primary Assembly 733 na Scaffold74 unplaced-scaffold na na RYZK01000074.1 = NZ_RYZK01000074.1 Primary Assembly 729 na Scaffold75 unplaced-scaffold na na RYZK01000075.1 = NZ_RYZK01000075.1 Primary Assembly 729 na Scaffold76 unplaced-scaffold na na RYZK01000076.1 = NZ_RYZK01000076.1 Primary Assembly 720 na Scaffold77 unplaced-scaffold na na RYZK01000077.1 = NZ_RYZK01000077.1 Primary Assembly 707 na Scaffold78 unplaced-scaffold na na RYZK01000078.1 = NZ_RYZK01000078.1 Primary Assembly 705 na Scaffold79 unplaced-scaffold na na RYZK01000079.1 = NZ_RYZK01000079.1 Primary Assembly 701 na Scaffold80 unplaced-scaffold na na RYZK01000080.1 = NZ_RYZK01000080.1 Primary Assembly 699 na Scaffold81 unplaced-scaffold na na RYZK01000081.1 = NZ_RYZK01000081.1 Primary Assembly 698 na Scaffold82 unplaced-scaffold na na RYZK01000082.1 = NZ_RYZK01000082.1 Primary Assembly 692 na Scaffold83 unplaced-scaffold na na RYZK01000083.1 = NZ_RYZK01000083.1 Primary Assembly 677 na Scaffold84 unplaced-scaffold na na RYZK01000084.1 = NZ_RYZK01000084.1 Primary Assembly 673 na Scaffold85 unplaced-scaffold na na RYZK01000085.1 = NZ_RYZK01000085.1 Primary Assembly 672 na Scaffold86 unplaced-scaffold na na RYZK01000086.1 = NZ_RYZK01000086.1 Primary Assembly 669 na Scaffold87 unplaced-scaffold na na RYZK01000087.1 = NZ_RYZK01000087.1 Primary Assembly 658 na Scaffold88 unplaced-scaffold na na RYZK01000088.1 = NZ_RYZK01000088.1 Primary Assembly 643 na Scaffold89 unplaced-scaffold na na RYZK01000089.1 = NZ_RYZK01000089.1 Primary Assembly 639 na Scaffold90 unplaced-scaffold na na RYZK01000090.1 = NZ_RYZK01000090.1 Primary Assembly 631 na Scaffold91 unplaced-scaffold na na RYZK01000091.1 = NZ_RYZK01000091.1 Primary Assembly 624 na Scaffold92 unplaced-scaffold na na RYZK01000092.1 = NZ_RYZK01000092.1 Primary Assembly 621 na Scaffold93 unplaced-scaffold na na RYZK01000093.1 = NZ_RYZK01000093.1 Primary Assembly 620 na Scaffold94 unplaced-scaffold na na RYZK01000094.1 = NZ_RYZK01000094.1 Primary Assembly 617 na Scaffold95 unplaced-scaffold na na RYZK01000095.1 = NZ_RYZK01000095.1 Primary Assembly 614 na Scaffold96 unplaced-scaffold na na RYZK01000096.1 = NZ_RYZK01000096.1 Primary Assembly 601 na Scaffold97 unplaced-scaffold na na RYZK01000097.1 = NZ_RYZK01000097.1 Primary Assembly 600 na Scaffold98 unplaced-scaffold na na RYZK01000098.1 = NZ_RYZK01000098.1 Primary Assembly 600 na Scaffold99 unplaced-scaffold na na RYZK01000099.1 = NZ_RYZK01000099.1 Primary Assembly 592 na Scaffold100 unplaced-scaffold na na RYZK01000100.1 = NZ_RYZK01000100.1 Primary Assembly 591 na Scaffold101 unplaced-scaffold na na RYZK01000101.1 = NZ_RYZK01000101.1 Primary Assembly 590 na Scaffold102 unplaced-scaffold na na RYZK01000102.1 = NZ_RYZK01000102.1 Primary Assembly 587 na Scaffold103 unplaced-scaffold na na RYZK01000103.1 = NZ_RYZK01000103.1 Primary Assembly 585 na Scaffold104 unplaced-scaffold na na RYZK01000104.1 = NZ_RYZK01000104.1 Primary Assembly 565 na Scaffold105 unplaced-scaffold na na RYZK01000105.1 = NZ_RYZK01000105.1 Primary Assembly 564 na Scaffold106 unplaced-scaffold na na RYZK01000106.1 = NZ_RYZK01000106.1 Primary Assembly 554 na Scaffold107 unplaced-scaffold na na RYZK01000107.1 = NZ_RYZK01000107.1 Primary Assembly 545 na Scaffold108 unplaced-scaffold na na RYZK01000108.1 = NZ_RYZK01000108.1 Primary Assembly 545 na Scaffold109 unplaced-scaffold na na RYZK01000109.1 = NZ_RYZK01000109.1 Primary Assembly 544 na Scaffold110 unplaced-scaffold na na RYZK01000110.1 = NZ_RYZK01000110.1 Primary Assembly 540 na Scaffold111 unplaced-scaffold na na RYZK01000111.1 = NZ_RYZK01000111.1 Primary Assembly 537 na Scaffold112 unplaced-scaffold na na RYZK01000112.1 = NZ_RYZK01000112.1 Primary Assembly 534 na Scaffold113 unplaced-scaffold na na RYZK01000113.1 = NZ_RYZK01000113.1 Primary Assembly 532 na Scaffold114 unplaced-scaffold na na RYZK01000114.1 = NZ_RYZK01000114.1 Primary Assembly 529 na Scaffold115 unplaced-scaffold na na RYZK01000115.1 = NZ_RYZK01000115.1 Primary Assembly 524 na Scaffold116 unplaced-scaffold na na RYZK01000116.1 = NZ_RYZK01000116.1 Primary Assembly 523 na Scaffold117 unplaced-scaffold na na RYZK01000117.1 = NZ_RYZK01000117.1 Primary Assembly 522 na Scaffold118 unplaced-scaffold na na RYZK01000118.1 = NZ_RYZK01000118.1 Primary Assembly 521 na Scaffold119 unplaced-scaffold na na RYZK01000119.1 = NZ_RYZK01000119.1 Primary Assembly 519 na Scaffold120 unplaced-scaffold na na RYZK01000120.1 = NZ_RYZK01000120.1 Primary Assembly 519 na Scaffold121 unplaced-scaffold na na RYZK01000121.1 = NZ_RYZK01000121.1 Primary Assembly 519 na Scaffold122 unplaced-scaffold na na RYZK01000122.1 = NZ_RYZK01000122.1 Primary Assembly 518 na Scaffold123 unplaced-scaffold na na RYZK01000123.1 = NZ_RYZK01000123.1 Primary Assembly 515 na Scaffold124 unplaced-scaffold na na RYZK01000124.1 = NZ_RYZK01000124.1 Primary Assembly 513 na Scaffold125 unplaced-scaffold na na RYZK01000125.1 = NZ_RYZK01000125.1 Primary Assembly 506 na Scaffold126 unplaced-scaffold na na RYZK01000126.1 = NZ_RYZK01000126.1 Primary Assembly 506 na Scaffold127 unplaced-scaffold na na RYZK01000127.1 = NZ_RYZK01000127.1 Primary Assembly 501 na