# Assembly name: ASM401180v1 # Organism name: Piscinibacter defluvii (b-proteobacteria) # Infraspecific name: strain=SH-1 # Taxid: 1796922 # BioSample: SAMN10225189 # BioProject: PRJNA495424 # Submitter: Sun Yat-sen University # Date: 2019-01-11 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: RCHJ01 # Assembly method: SPAdes v. 3.6.0 # Expected final version: yes # Genome coverage: 100.0x # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_004011805.1 # RefSeq assembly accession: GCF_004011805.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004011815.1 GCF_004011815.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name CL100079052_L01_505.Scaf1 unplaced-scaffold na na ML137196.1 = NZ_ML137196.1 Primary Assembly 863400 na CL100079052_L01_505.Scaf6 unplaced-scaffold na na ML137197.1 = NZ_ML137197.1 Primary Assembly 385769 na CL100079052_L01_505.Scaf7 unplaced-scaffold na na ML137198.1 = NZ_ML137198.1 Primary Assembly 317257 na CL100079052_L01_505.Scaf8 unplaced-scaffold na na ML137199.1 = NZ_ML137199.1 Primary Assembly 304789 na CL100079052_L01_505.Scaf14 unplaced-scaffold na na ML137200.1 = NZ_ML137200.1 Primary Assembly 145898 na CL100079052_L01_505.Scaf38 unplaced-scaffold na na ML137201.1 = NZ_ML137201.1 Primary Assembly 15782 na CL100079052_L01_505.Scaf39 unplaced-scaffold na na ML137202.1 = NZ_ML137202.1 Primary Assembly 14032 na CL100079052_L01_505.Scaf40 unplaced-scaffold na na ML137203.1 = NZ_ML137203.1 Primary Assembly 9966 na CL100079052_L01_505.Scaf44 unplaced-scaffold na na ML137204.1 = NZ_ML137204.1 Primary Assembly 7895 na CL100079052_L01_505.Scaf58 unplaced-scaffold na na ML137205.1 = NZ_ML137205.1 Primary Assembly 4246 na CL100079052_L01_505.Scaf62 unplaced-scaffold na na ML137206.1 = NZ_ML137206.1 Primary Assembly 3874 na CL100079052_L01_505.Scaf87 unplaced-scaffold na na ML137207.1 = NZ_ML137207.1 Primary Assembly 1849 na CL100079052_L01_505.Scaf89 unplaced-scaffold na na ML137208.1 = NZ_ML137208.1 Primary Assembly 1686 na CL100079052_L01_505.Scaf2 unplaced-scaffold na na RCHJ01000003.1 = NZ_RCHJ01000003.1 Primary Assembly 685853 na CL100079052_L01_505.Scaf3 unplaced-scaffold na na RCHJ01000004.1 = NZ_RCHJ01000004.1 Primary Assembly 628904 na CL100079052_L01_505.Scaf4 unplaced-scaffold na na RCHJ01000005.1 = NZ_RCHJ01000005.1 Primary Assembly 458676 na CL100079052_L01_505.Scaf5 unplaced-scaffold na na RCHJ01000006.1 = NZ_RCHJ01000006.1 Primary Assembly 391973 na CL100079052_L01_505.Scaf9 unplaced-scaffold na na RCHJ01000013.1 = NZ_RCHJ01000013.1 Primary Assembly 286966 na CL100079052_L01_505.Scaf10 unplaced-scaffold na na RCHJ01000014.1 = NZ_RCHJ01000014.1 Primary Assembly 277019 na CL100079052_L01_505.Scaf11 unplaced-scaffold na na RCHJ01000015.1 = NZ_RCHJ01000015.1 Primary Assembly 240380 na CL100079052_L01_505.Scaf12 unplaced-scaffold na na RCHJ01000016.1 = NZ_RCHJ01000016.1 Primary Assembly 224619 na CL100079052_L01_505.Scaf13 unplaced-scaffold na na RCHJ01000017.1 = NZ_RCHJ01000017.1 Primary Assembly 160756 na CL100079052_L01_505.Scaf15 unplaced-scaffold na na RCHJ01000020.1 = NZ_RCHJ01000020.1 Primary Assembly 143559 na CL100079052_L01_505.Scaf16 unplaced-scaffold na na RCHJ01000021.1 = NZ_RCHJ01000021.1 Primary Assembly 126591 na CL100079052_L01_505.Scaf17 unplaced-scaffold na na RCHJ01000022.1 = NZ_RCHJ01000022.1 Primary Assembly 116798 na CL100079052_L01_505.Scaf18 unplaced-scaffold na na RCHJ01000023.1 = NZ_RCHJ01000023.1 Primary Assembly 107628 na CL100079052_L01_505.Scaf19 unplaced-scaffold na na RCHJ01000024.1 = NZ_RCHJ01000024.1 Primary Assembly 107532 na CL100079052_L01_505.Scaf20 unplaced-scaffold na na RCHJ01000025.1 = NZ_RCHJ01000025.1 Primary Assembly 87461 na CL100079052_L01_505.Scaf21 unplaced-scaffold na na RCHJ01000026.1 = NZ_RCHJ01000026.1 Primary Assembly 86693 na CL100079052_L01_505.Scaf22 unplaced-scaffold na na RCHJ01000027.1 = NZ_RCHJ01000027.1 Primary Assembly 76727 na CL100079052_L01_505.Scaf23 unplaced-scaffold na na RCHJ01000028.1 = NZ_RCHJ01000028.1 Primary Assembly 68196 na CL100079052_L01_505.Scaf24 unplaced-scaffold na na RCHJ01000029.1 = NZ_RCHJ01000029.1 Primary Assembly 56968 na CL100079052_L01_505.Scaf25 unplaced-scaffold na na RCHJ01000030.1 = NZ_RCHJ01000030.1 Primary Assembly 55331 na CL100079052_L01_505.Scaf26 unplaced-scaffold na na RCHJ01000031.1 = NZ_RCHJ01000031.1 Primary Assembly 47487 na CL100079052_L01_505.Scaf27 unplaced-scaffold na na RCHJ01000032.1 = NZ_RCHJ01000032.1 Primary Assembly 44141 na CL100079052_L01_505.Scaf28 unplaced-scaffold na na RCHJ01000033.1 = NZ_RCHJ01000033.1 Primary Assembly 43752 na CL100079052_L01_505.Scaf29 unplaced-scaffold na na RCHJ01000034.1 = NZ_RCHJ01000034.1 Primary Assembly 40820 na CL100079052_L01_505.Scaf30 unplaced-scaffold na na RCHJ01000035.1 = NZ_RCHJ01000035.1 Primary Assembly 34417 na CL100079052_L01_505.Scaf31 unplaced-scaffold na na RCHJ01000036.1 = NZ_RCHJ01000036.1 Primary Assembly 33404 na CL100079052_L01_505.Scaf32 unplaced-scaffold na na RCHJ01000037.1 = NZ_RCHJ01000037.1 Primary Assembly 32224 na CL100079052_L01_505.Scaf33 unplaced-scaffold na na RCHJ01000038.1 = NZ_RCHJ01000038.1 Primary Assembly 31451 na CL100079052_L01_505.Scaf34 unplaced-scaffold na na RCHJ01000039.1 = NZ_RCHJ01000039.1 Primary Assembly 29477 na CL100079052_L01_505.Scaf35 unplaced-scaffold na na RCHJ01000040.1 = NZ_RCHJ01000040.1 Primary Assembly 27667 na CL100079052_L01_505.Scaf36 unplaced-scaffold na na RCHJ01000041.1 = NZ_RCHJ01000041.1 Primary Assembly 17187 na CL100079052_L01_505.Scaf37 unplaced-scaffold na na RCHJ01000042.1 = NZ_RCHJ01000042.1 Primary Assembly 16622 na CL100079052_L01_505.Scaf41 unplaced-scaffold na na RCHJ01000049.1 = NZ_RCHJ01000049.1 Primary Assembly 9637 na CL100079052_L01_505.Scaf42 unplaced-scaffold na na RCHJ01000050.1 = NZ_RCHJ01000050.1 Primary Assembly 8520 na CL100079052_L01_505.Scaf43 unplaced-scaffold na na RCHJ01000051.1 = NZ_RCHJ01000051.1 Primary Assembly 8200 na CL100079052_L01_505.Scaf45 unplaced-scaffold na na RCHJ01000054.1 = NZ_RCHJ01000054.1 Primary Assembly 7678 na CL100079052_L01_505.Scaf46 unplaced-scaffold na na RCHJ01000055.1 = NZ_RCHJ01000055.1 Primary Assembly 6862 na CL100079052_L01_505.Scaf47 unplaced-scaffold na na RCHJ01000056.1 = NZ_RCHJ01000056.1 Primary Assembly 6215 na CL100079052_L01_505.Scaf48 unplaced-scaffold na na RCHJ01000057.1 = NZ_RCHJ01000057.1 Primary Assembly 6153 na CL100079052_L01_505.Scaf49 unplaced-scaffold na na RCHJ01000058.1 = NZ_RCHJ01000058.1 Primary Assembly 6151 na CL100079052_L01_505.Scaf50 unplaced-scaffold na na RCHJ01000059.1 = NZ_RCHJ01000059.1 Primary Assembly 5741 na CL100079052_L01_505.Scaf51 unplaced-scaffold na na RCHJ01000060.1 = NZ_RCHJ01000060.1 Primary Assembly 5733 na CL100079052_L01_505.Scaf52 unplaced-scaffold na na RCHJ01000061.1 = NZ_RCHJ01000061.1 Primary Assembly 5169 na CL100079052_L01_505.Scaf53 unplaced-scaffold na na RCHJ01000062.1 = NZ_RCHJ01000062.1 Primary Assembly 5045 na CL100079052_L01_505.Scaf54 unplaced-scaffold na na RCHJ01000063.1 = NZ_RCHJ01000063.1 Primary Assembly 4660 na CL100079052_L01_505.Scaf55 unplaced-scaffold na na RCHJ01000064.1 = NZ_RCHJ01000064.1 Primary Assembly 4581 na CL100079052_L01_505.Scaf56 unplaced-scaffold na na RCHJ01000065.1 = NZ_RCHJ01000065.1 Primary Assembly 4473 na CL100079052_L01_505.Scaf57 unplaced-scaffold na na RCHJ01000066.1 = NZ_RCHJ01000066.1 Primary Assembly 4306 na CL100079052_L01_505.Scaf59 unplaced-scaffold na na RCHJ01000069.1 = NZ_RCHJ01000069.1 Primary Assembly 4212 na CL100079052_L01_505.Scaf60 unplaced-scaffold na na RCHJ01000070.1 = NZ_RCHJ01000070.1 Primary Assembly 4157 na CL100079052_L01_505.Scaf61 unplaced-scaffold na na RCHJ01000071.1 = NZ_RCHJ01000071.1 Primary Assembly 4137 na CL100079052_L01_505.Scaf63 unplaced-scaffold na na RCHJ01000074.1 = NZ_RCHJ01000074.1 Primary Assembly 3772 na CL100079052_L01_505.Scaf64 unplaced-scaffold na na RCHJ01000075.1 = NZ_RCHJ01000075.1 Primary Assembly 3549 na CL100079052_L01_505.Scaf65 unplaced-scaffold na na RCHJ01000076.1 = NZ_RCHJ01000076.1 Primary Assembly 3504 na CL100079052_L01_505.Scaf66 unplaced-scaffold na na RCHJ01000077.1 = NZ_RCHJ01000077.1 Primary Assembly 3497 na CL100079052_L01_505.Scaf67 unplaced-scaffold na na RCHJ01000078.1 = NZ_RCHJ01000078.1 Primary Assembly 3459 na CL100079052_L01_505.Scaf68 unplaced-scaffold na na RCHJ01000079.1 = NZ_RCHJ01000079.1 Primary Assembly 3279 na CL100079052_L01_505.Scaf69 unplaced-scaffold na na RCHJ01000080.1 = NZ_RCHJ01000080.1 Primary Assembly 3276 na CL100079052_L01_505.Scaf70 unplaced-scaffold na na RCHJ01000081.1 = NZ_RCHJ01000081.1 Primary Assembly 3142 na CL100079052_L01_505.Scaf71 unplaced-scaffold na na RCHJ01000082.1 = NZ_RCHJ01000082.1 Primary Assembly 3069 na CL100079052_L01_505.Scaf72 unplaced-scaffold na na RCHJ01000083.1 = NZ_RCHJ01000083.1 Primary Assembly 3058 na CL100079052_L01_505.Scaf73 unplaced-scaffold na na RCHJ01000084.1 = NZ_RCHJ01000084.1 Primary Assembly 2985 na CL100079052_L01_505.Scaf74 unplaced-scaffold na na RCHJ01000085.1 = NZ_RCHJ01000085.1 Primary Assembly 2983 na CL100079052_L01_505.Scaf75 unplaced-scaffold na na RCHJ01000086.1 = NZ_RCHJ01000086.1 Primary Assembly 2906 na CL100079052_L01_505.Scaf76 unplaced-scaffold na na RCHJ01000087.1 = NZ_RCHJ01000087.1 Primary Assembly 2662 na CL100079052_L01_505.Scaf77 unplaced-scaffold na na RCHJ01000088.1 = NZ_RCHJ01000088.1 Primary Assembly 2625 na CL100079052_L01_505.Scaf78 unplaced-scaffold na na RCHJ01000089.1 = NZ_RCHJ01000089.1 Primary Assembly 2548 na CL100079052_L01_505.Scaf79 unplaced-scaffold na na RCHJ01000090.1 = NZ_RCHJ01000090.1 Primary Assembly 2474 na CL100079052_L01_505.Scaf80 unplaced-scaffold na na RCHJ01000091.1 = NZ_RCHJ01000091.1 Primary Assembly 2317 na CL100079052_L01_505.Scaf81 unplaced-scaffold na na RCHJ01000092.1 = NZ_RCHJ01000092.1 Primary Assembly 2272 na CL100079052_L01_505.Scaf82 unplaced-scaffold na na RCHJ01000093.1 = NZ_RCHJ01000093.1 Primary Assembly 2212 na CL100079052_L01_505.Scaf83 unplaced-scaffold na na RCHJ01000094.1 = NZ_RCHJ01000094.1 Primary Assembly 2205 na CL100079052_L01_505.Scaf84 unplaced-scaffold na na RCHJ01000095.1 = NZ_RCHJ01000095.1 Primary Assembly 2188 na CL100079052_L01_505.Scaf85 unplaced-scaffold na na RCHJ01000096.1 = NZ_RCHJ01000096.1 Primary Assembly 1898 na CL100079052_L01_505.Scaf86 unplaced-scaffold na na RCHJ01000097.1 = NZ_RCHJ01000097.1 Primary Assembly 1861 na CL100079052_L01_505.Scaf88 unplaced-scaffold na na RCHJ01000100.1 = NZ_RCHJ01000100.1 Primary Assembly 1780 na CL100079052_L01_505.Scaf90 unplaced-scaffold na na RCHJ01000103.1 = NZ_RCHJ01000103.1 Primary Assembly 1574 na CL100079052_L01_505.Scaf91 unplaced-scaffold na na RCHJ01000104.1 = NZ_RCHJ01000104.1 Primary Assembly 1528 na CL100079052_L01_505.Scaf92 unplaced-scaffold na na RCHJ01000105.1 = NZ_RCHJ01000105.1 Primary Assembly 1501 na CL100079052_L01_505.Scaf93 unplaced-scaffold na na RCHJ01000106.1 = NZ_RCHJ01000106.1 Primary Assembly 1438 na CL100079052_L01_505.Scaf94 unplaced-scaffold na na RCHJ01000107.1 = NZ_RCHJ01000107.1 Primary Assembly 1437 na CL100079052_L01_505.Scaf95 unplaced-scaffold na na RCHJ01000108.1 = NZ_RCHJ01000108.1 Primary Assembly 1436 na CL100079052_L01_505.Scaf96 unplaced-scaffold na na RCHJ01000109.1 = NZ_RCHJ01000109.1 Primary Assembly 1430 na CL100079052_L01_505.Scaf97 unplaced-scaffold na na RCHJ01000110.1 = NZ_RCHJ01000110.1 Primary Assembly 1425 na CL100079052_L01_505.Scaf98 unplaced-scaffold na na RCHJ01000111.1 = NZ_RCHJ01000111.1 Primary Assembly 1368 na CL100079052_L01_505.Scaf99 unplaced-scaffold na na RCHJ01000112.1 = NZ_RCHJ01000112.1 Primary Assembly 1351 na CL100079052_L01_505.Scaf100 unplaced-scaffold na na RCHJ01000113.1 = NZ_RCHJ01000113.1 Primary Assembly 1333 na CL100079052_L01_505.Scaf101 unplaced-scaffold na na RCHJ01000114.1 = NZ_RCHJ01000114.1 Primary Assembly 1321 na CL100079052_L01_505.Scaf102 unplaced-scaffold na na RCHJ01000115.1 = NZ_RCHJ01000115.1 Primary Assembly 1264 na CL100079052_L01_505.Scaf103 unplaced-scaffold na na RCHJ01000116.1 = NZ_RCHJ01000116.1 Primary Assembly 1255 na CL100079052_L01_505.Scaf104 unplaced-scaffold na na RCHJ01000117.1 = NZ_RCHJ01000117.1 Primary Assembly 1222 na CL100079052_L01_505.Scaf105 unplaced-scaffold na na RCHJ01000118.1 = NZ_RCHJ01000118.1 Primary Assembly 1205 na CL100079052_L01_505.Scaf106 unplaced-scaffold na na RCHJ01000119.1 = NZ_RCHJ01000119.1 Primary Assembly 1187 na CL100079052_L01_505.Scaf107 unplaced-scaffold na na RCHJ01000120.1 = NZ_RCHJ01000120.1 Primary Assembly 1185 na CL100079052_L01_505.Scaf108 unplaced-scaffold na na RCHJ01000121.1 = NZ_RCHJ01000121.1 Primary Assembly 1090 na CL100079052_L01_505.Scaf109 unplaced-scaffold na na RCHJ01000122.1 = NZ_RCHJ01000122.1 Primary Assembly 1061 na CL100079052_L01_505.Scaf110 unplaced-scaffold na na RCHJ01000123.1 = NZ_RCHJ01000123.1 Primary Assembly 1012 na CL100079052_L01_505.Scaf111 unplaced-scaffold na na RCHJ01000124.1 = NZ_RCHJ01000124.1 Primary Assembly 900 na CL100079052_L01_505.Scaf112 unplaced-scaffold na na RCHJ01000125.1 = NZ_RCHJ01000125.1 Primary Assembly 837 na CL100079052_L01_505.Scaf113 unplaced-scaffold na na RCHJ01000126.1 = NZ_RCHJ01000126.1 Primary Assembly 818 na CL100079052_L01_505.Scaf114 unplaced-scaffold na na RCHJ01000127.1 = NZ_RCHJ01000127.1 Primary Assembly 798 na CL100079052_L01_505.Scaf115 unplaced-scaffold na na RCHJ01000128.1 = NZ_RCHJ01000128.1 Primary Assembly 715 na CL100079052_L01_505.Scaf116 unplaced-scaffold na na RCHJ01000129.1 = NZ_RCHJ01000129.1 Primary Assembly 704 na CL100079052_L01_505.Scaf117 unplaced-scaffold na na RCHJ01000130.1 = NZ_RCHJ01000130.1 Primary Assembly 691 na CL100079052_L01_505.Scaf118 unplaced-scaffold na na RCHJ01000131.1 = NZ_RCHJ01000131.1 Primary Assembly 689 na CL100079052_L01_505.Scaf119 unplaced-scaffold na na RCHJ01000132.1 = NZ_RCHJ01000132.1 Primary Assembly 630 na CL100079052_L01_505.Scaf120 unplaced-scaffold na na RCHJ01000133.1 = NZ_RCHJ01000133.1 Primary Assembly 617 na CL100079052_L01_505.Scaf121 unplaced-scaffold na na RCHJ01000134.1 = NZ_RCHJ01000134.1 Primary Assembly 617 na CL100079052_L01_505.Scaf122 unplaced-scaffold na na RCHJ01000135.1 = NZ_RCHJ01000135.1 Primary Assembly 612 na CL100079052_L01_505.Scaf123 unplaced-scaffold na na RCHJ01000136.1 = NZ_RCHJ01000136.1 Primary Assembly 598 na CL100079052_L01_505.Scaf124 unplaced-scaffold na na RCHJ01000137.1 = NZ_RCHJ01000137.1 Primary Assembly 589 na CL100079052_L01_505.Scaf125 unplaced-scaffold na na RCHJ01000138.1 = NZ_RCHJ01000138.1 Primary Assembly 581 na CL100079052_L01_505.Scaf126 unplaced-scaffold na na RCHJ01000139.1 = NZ_RCHJ01000139.1 Primary Assembly 580 na CL100079052_L01_505.Scaf127 unplaced-scaffold na na RCHJ01000140.1 = NZ_RCHJ01000140.1 Primary Assembly 562 na CL100079052_L01_505.Scaf128 unplaced-scaffold na na RCHJ01000141.1 = NZ_RCHJ01000141.1 Primary Assembly 552 na CL100079052_L01_505.Scaf129 unplaced-scaffold na na RCHJ01000142.1 = NZ_RCHJ01000142.1 Primary Assembly 519 na CL100079052_L01_505.Scaf130 unplaced-scaffold na na RCHJ01000143.1 = NZ_RCHJ01000143.1 Primary Assembly 509 na