# Assembly name:  bStrHab1.2.pri
# Organism name:  Strigops habroptila (Kakapo)
# Isolate:  Jane
# Sex:  female
# Taxid:          2489341
# BioSample:      SAMN09948751
# BioProject:     PRJNA489135
# Submitter:      Vertebrate Genomes Project
# Date:           2020-03-04
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    RXXE02
# Assembly method: FALCON v. 5.1.1; FALCON unzip v. 1.0.2; scaff10X v. git 4.28.2018; Bionano Solve DLS v. 3.2.1; Salsa2 HiC v. 2.0; smrtanalysis Arrow polishing & gap filling v. 5.1.0.26412; longranger align v. 2.2.2; freebayes v. 1.2.0; purge_haplotigs v. bit 7.10.2018; gEVAL manual curation v. 2019-11-08
# Expected final version: no
# Genome coverage: 76.1x
# Sequencing technology: PacBio RSII; 10X Genomics linked reads; Bionano Genomics DLS; Arima Genomics HiC
# RefSeq category: Representative Genome
# GenBank assembly accession: GCA_004027225.2
# RefSeq assembly accession: GCF_004027225.2
# RefSeq assembly and GenBank assemblies identical: no
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_004027235.2	GCF_004027235.2	Primary Assembly
## GCA_004027245.2		non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
S1	assembled-molecule	1	Chromosome	CM013761.2	=	NC_044277.2	Primary Assembly	155644563	na
S2	assembled-molecule	2	Chromosome	CM013762.2	=	NC_044278.2	Primary Assembly	123023803	na
S4	assembled-molecule	3	Chromosome	CM013764.2	=	NC_044279.2	Primary Assembly	89082643	na
S5	assembled-molecule	4	Chromosome	CM013765.1	=	NC_046358.1	Primary Assembly	86460390	na
S6	assembled-molecule	5	Chromosome	CM013766.2	=	NC_044281.2	Primary Assembly	83240647	na
S7	assembled-molecule	6	Chromosome	CM013767.2	=	NC_044282.2	Primary Assembly	76431904	na
S8	assembled-molecule	7	Chromosome	CM013768.2	=	NC_044283.2	Primary Assembly	70131234	na
S9	assembled-molecule	8	Chromosome	CM013769.2	=	NC_044284.2	Primary Assembly	63488934	na
S10	assembled-molecule	9	Chromosome	CM013770.2	=	NC_044285.2	Primary Assembly	44431488	na
S11	assembled-molecule	10	Chromosome	CM013771.1	=	NC_046359.1	Primary Assembly	43764472	na
S12	assembled-molecule	11	Chromosome	CM013772.1	=	NC_046360.1	Primary Assembly	39187110	na
S14	assembled-molecule	12	Chromosome	CM013774.2	=	NC_044288.2	Primary Assembly	27433492	na
S15	assembled-molecule	13	Chromosome	CM013775.2	=	NC_044289.2	Primary Assembly	16476160	na
S17	assembled-molecule	14	Chromosome	CM013776.2	=	NC_044290.2	Primary Assembly	12884122	na
S18	assembled-molecule	15	Chromosome	CM013777.2	=	NC_044291.2	Primary Assembly	12307978	na
S19	assembled-molecule	16	Chromosome	CM013778.2	=	NC_044292.2	Primary Assembly	8419051	na
S20	assembled-molecule	17	Chromosome	CM013779.2	=	NC_044293.2	Primary Assembly	7441144	na
S21	assembled-molecule	18	Chromosome	CM013780.2	=	NC_044294.2	Primary Assembly	6734548	na
S22	assembled-molecule	19	Chromosome	CM013781.2	=	NC_044295.2	Primary Assembly	5789228	na
S23	assembled-molecule	20	Chromosome	CM013782.2	=	NC_044296.2	Primary Assembly	5645757	na
S24	assembled-molecule	21	Chromosome	CM013783.2	=	NC_044297.2	Primary Assembly	5492648	na
S26	assembled-molecule	22	Chromosome	CM013784.2	=	NC_044298.2	Primary Assembly	2907026	na
S25	assembled-molecule	23	Chromosome	CM013785.2	=	NC_044299.2	Primary Assembly	2785283	na
S13	assembled-molecule	W	Chromosome	CM013773.2	=	NC_044301.2	Primary Assembly	37425726	na
S3	assembled-molecule	Z	Chromosome	CM013763.2	=	NC_044302.2	Primary Assembly	101869369	na
S16	unlocalized-scaffold	13	Chromosome	RXXE02000016.1	=	NW_022651054.1	Primary Assembly	12224398	na
NC_044298.1_ctg1	unplaced-scaffold	na	na	RXXE02000027.1	=	NW_022651055.1	Primary Assembly	556942	na
NC_044299.1_ctg1	unplaced-scaffold	na	na	RXXE02000028.1	=	NW_022651056.1	Primary Assembly	378074	na
NC_044300.1_ctg1	unplaced-scaffold	na	na	RXXE02000029.1	=	NW_022651057.1	Primary Assembly	211696	na
NW_022045576.1_ctg1	unplaced-scaffold	na	na	RXXE02000030.1	=	NW_022651058.1	Primary Assembly	33736	na
NW_022045577.1_ctg1	unplaced-scaffold	na	na	RXXE02000031.1	=	NW_022651059.1	Primary Assembly	357906	na
NW_022045578.1_ctg1	unplaced-scaffold	na	na	RXXE02000032.1	=	NW_022651060.1	Primary Assembly	45507	na
NW_022045579.1_ctg1	unplaced-scaffold	na	na	RXXE02000033.1	=	NW_022651061.1	Primary Assembly	20747	na
NW_022045580.1_ctg1	unplaced-scaffold	na	na	RXXE02000034.1	=	NW_022651062.1	Primary Assembly	60270	na
NW_022045581.1_ctg1	unplaced-scaffold	na	na	RXXE02000035.1	=	NW_022651063.1	Primary Assembly	24535	na
NW_022045582.1_ctg1	unplaced-scaffold	na	na	RXXE02000036.1	=	NW_022651064.1	Primary Assembly	33252	na
NW_022045583.1_ctg1	unplaced-scaffold	na	na	RXXE02000037.1	=	NW_022651065.1	Primary Assembly	34148	na
NW_022045584.1_ctg1	unplaced-scaffold	na	na	RXXE02000038.1	=	NW_022651066.1	Primary Assembly	151271	na
NW_022045585.1_ctg1	unplaced-scaffold	na	na	RXXE02000039.1	=	NW_022651067.1	Primary Assembly	79880	na
NW_022045586.1_ctg1	unplaced-scaffold	na	na	RXXE02000040.1	=	NW_022651068.1	Primary Assembly	28315	na
NW_022045587.1_ctg1	unplaced-scaffold	na	na	RXXE02000041.1	=	NW_022651069.1	Primary Assembly	52918	na
NW_022045588.1_ctg1	unplaced-scaffold	na	na	RXXE02000042.1	=	NW_022651070.1	Primary Assembly	86693	na
NW_022045589.1_ctg1	unplaced-scaffold	na	na	RXXE02000043.1	=	NW_022651071.1	Primary Assembly	222505	na
NW_022045591.1_ctg1	unplaced-scaffold	na	na	RXXE02000044.1	=	NW_022651072.1	Primary Assembly	77094	na
NW_022045592.1_ctg1	unplaced-scaffold	na	na	RXXE02000045.1	=	NW_022651073.1	Primary Assembly	33863	na
NW_022045593.1_ctg1	unplaced-scaffold	na	na	RXXE02000046.1	=	NW_022651074.1	Primary Assembly	21488	na
NW_022045594.1_ctg1	unplaced-scaffold	na	na	RXXE02000047.1	=	NW_022651075.1	Primary Assembly	24155	na
NW_022045595.1_ctg1	unplaced-scaffold	na	na	RXXE02000048.1	=	NW_022651076.1	Primary Assembly	48637	na
NW_022045596.1_ctg1	unplaced-scaffold	na	na	RXXE02000049.1	=	NW_022651077.1	Primary Assembly	46904	na
NW_022045597.1_ctg1	unplaced-scaffold	na	na	RXXE02000050.1	=	NW_022651078.1	Primary Assembly	114670	na
NW_022045598.1_ctg1	unplaced-scaffold	na	na	RXXE02000051.1	=	NW_022651079.1	Primary Assembly	31560	na
NW_022045599.1_ctg1	unplaced-scaffold	na	na	RXXE02000052.1	=	NW_022651080.1	Primary Assembly	56214	na
NW_022045600.1_ctg1	unplaced-scaffold	na	na	RXXE02000053.1	=	NW_022651081.1	Primary Assembly	38872	na
NW_022045601.1_ctg1	unplaced-scaffold	na	na	RXXE02000054.1	=	NW_022651082.1	Primary Assembly	90314	na
NW_022045602.1_ctg1	unplaced-scaffold	na	na	RXXE02000055.1	=	NW_022651083.1	Primary Assembly	253776	na
NW_022045603.1_ctg1	unplaced-scaffold	na	na	RXXE02000056.1	=	NW_022651084.1	Primary Assembly	24179	na
NW_022045604.1_ctg1	unplaced-scaffold	na	na	RXXE02000057.1	=	NW_022651085.1	Primary Assembly	70586	na
NW_022045605.1_ctg1	unplaced-scaffold	na	na	RXXE02000058.1	=	NW_022651086.1	Primary Assembly	36894	na
NW_022045606.1_ctg1	unplaced-scaffold	na	na	RXXE02000059.1	=	NW_022651087.1	Primary Assembly	76117	na
NW_022045608.1_ctg1	unplaced-scaffold	na	na	RXXE02000060.1	=	NW_022651088.1	Primary Assembly	47232	na
NW_022045610.1_ctg1	unplaced-scaffold	na	na	RXXE02000061.1	=	NW_022651089.1	Primary Assembly	49887	na
NW_022045611.1_ctg1	unplaced-scaffold	na	na	RXXE02000062.1	=	NW_022651090.1	Primary Assembly	57529	na
NW_022045612.1_ctg1	unplaced-scaffold	na	na	RXXE02000063.1	=	NW_022651091.1	Primary Assembly	44814	na
NW_022045614.1_ctg1	unplaced-scaffold	na	na	RXXE02000064.1	=	NW_022651092.1	Primary Assembly	44271	na
NW_022045615.1_ctg1	unplaced-scaffold	na	na	RXXE02000065.1	=	NW_022651093.1	Primary Assembly	21581	na
NW_022045616.1_ctg1	unplaced-scaffold	na	na	RXXE02000066.1	=	NW_022651094.1	Primary Assembly	27098	na
NW_022045617.1_ctg1	unplaced-scaffold	na	na	RXXE02000067.1	=	NW_022651095.1	Primary Assembly	59057	na
NW_022045618.1_ctg1	unplaced-scaffold	na	na	RXXE02000068.1	=	NW_022651096.1	Primary Assembly	20789	na
NW_022045619.1_ctg1	unplaced-scaffold	na	na	RXXE02000069.1	=	NW_022651097.1	Primary Assembly	62886	na
NW_022045621.1_ctg1	unplaced-scaffold	na	na	RXXE02000070.1	=	NW_022651098.1	Primary Assembly	48461	na
NW_022045622.1_ctg1	unplaced-scaffold	na	na	RXXE02000071.1	=	NW_022651099.1	Primary Assembly	73844	na
NW_022045623.1_ctg1	unplaced-scaffold	na	na	RXXE02000072.1	=	NW_022651100.1	Primary Assembly	47485	na
NW_022045624.1_ctg1	unplaced-scaffold	na	na	RXXE02000073.1	=	NW_022651101.1	Primary Assembly	22520	na
NW_022045625.1_ctg1	unplaced-scaffold	na	na	RXXE02000074.1	=	NW_022651102.1	Primary Assembly	54083	na
NW_022045626.1_ctg1	unplaced-scaffold	na	na	RXXE02000075.1	=	NW_022651103.1	Primary Assembly	35551	na
NW_022045627.1_ctg1	unplaced-scaffold	na	na	RXXE02000076.1	=	NW_022651104.1	Primary Assembly	151516	na
NW_022045628.1_ctg1	unplaced-scaffold	na	na	RXXE02000077.1	=	NW_022651105.1	Primary Assembly	684923	na
NW_022045629.1_ctg1	unplaced-scaffold	na	na	RXXE02000078.1	=	NW_022651106.1	Primary Assembly	348875	na
NW_022045630.1_ctg1	unplaced-scaffold	na	na	RXXE02000079.1	=	NW_022651107.1	Primary Assembly	32151	na
NW_022045631.1_ctg1	unplaced-scaffold	na	na	RXXE02000080.1	=	NW_022651108.1	Primary Assembly	286977	na
NW_022045633.1_ctg1	unplaced-scaffold	na	na	RXXE02000081.1	=	NW_022651109.1	Primary Assembly	229176	na
NW_022045634.1_ctg1	unplaced-scaffold	na	na	RXXE02000082.1	=	NW_022651110.1	Primary Assembly	784362	na
NW_022045635.1_ctg1	unplaced-scaffold	na	na	RXXE02000083.1	=	NW_022651111.1	Primary Assembly	234768	na
NW_022045636.1_ctg1	unplaced-scaffold	na	na	RXXE02000084.1	=	NW_022651112.1	Primary Assembly	460413	na
NW_022045637.1_ctg1	unplaced-scaffold	na	na	RXXE02000085.1	=	NW_022651113.1	Primary Assembly	35802	na
NW_022045638.1_ctg1	unplaced-scaffold	na	na	RXXE02000086.1	=	NW_022651114.1	Primary Assembly	49631	na
NW_022045639.1_ctg1	unplaced-scaffold	na	na	RXXE02000087.1	=	NW_022651115.1	Primary Assembly	164872	na
NW_022045640.1_ctg1	unplaced-scaffold	na	na	RXXE02000088.1	=	NW_022651116.1	Primary Assembly	241945	na
NW_022045641.1_ctg1	unplaced-scaffold	na	na	RXXE02000089.1	=	NW_022651117.1	Primary Assembly	28210	na
bStrHab1_MT	assembled-molecule	MT	Mitochondrion	CM013787.2	<>	na	non-nuclear	17830	na