# Assembly name: ASM411508v1 # Organism name: Longirhabdus pacifica (firmicutes) # Infraspecific name: strain=SCSIO 06110 # Taxid: 2305227 # BioSample: SAMN09914404 # BioProject: PRJNA487921 # Submitter: South China Sea Institute of Oceanology, Chinese Academy of Sciences # Date: 2019-01-28 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: QXJP01 # Assembly method: Celera Assembler v. 8.3 # Expected final version: yes # Genome coverage: 301.0x # Sequencing technology: Illumina; PacBio # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_004115085.1 # RefSeq assembly accession: GCF_004115085.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004115095.1 GCF_004115095.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na QXJP01000001.1 = NZ_QXJP01000001.1 Primary Assembly 324553 na Scaffold2_1 unplaced-scaffold na na QXJP01000002.1 = NZ_QXJP01000002.1 Primary Assembly 278926 na Scaffold3_1 unplaced-scaffold na na QXJP01000003.1 = NZ_QXJP01000003.1 Primary Assembly 257840 na Scaffold4_1 unplaced-scaffold na na QXJP01000004.1 = NZ_QXJP01000004.1 Primary Assembly 239736 na Scaffold5_1 unplaced-scaffold na na QXJP01000005.1 = NZ_QXJP01000005.1 Primary Assembly 222126 na Scaffold6_1 unplaced-scaffold na na QXJP01000006.1 = NZ_QXJP01000006.1 Primary Assembly 209890 na Scaffold7_1 unplaced-scaffold na na QXJP01000007.1 = NZ_QXJP01000007.1 Primary Assembly 197134 na Scaffold8_1 unplaced-scaffold na na QXJP01000008.1 = NZ_QXJP01000008.1 Primary Assembly 170411 na Scaffold9_1 unplaced-scaffold na na QXJP01000009.1 = NZ_QXJP01000009.1 Primary Assembly 148782 na Scaffold10_1 unplaced-scaffold na na QXJP01000010.1 = NZ_QXJP01000010.1 Primary Assembly 123640 na Scaffold11_1 unplaced-scaffold na na QXJP01000011.1 = NZ_QXJP01000011.1 Primary Assembly 118632 na Scaffold12_1 unplaced-scaffold na na QXJP01000012.1 = NZ_QXJP01000012.1 Primary Assembly 13562 na Scaffold12_2 unplaced-scaffold na na QXJP01000013.1 = NZ_QXJP01000013.1 Primary Assembly 102305 na Scaffold13_1 unplaced-scaffold na na QXJP01000014.1 = NZ_QXJP01000014.1 Primary Assembly 106547 na Scaffold14_1 unplaced-scaffold na na QXJP01000015.1 = NZ_QXJP01000015.1 Primary Assembly 98534 na Scaffold15_1 unplaced-scaffold na na QXJP01000016.1 = NZ_QXJP01000016.1 Primary Assembly 87387 na Scaffold16_1 unplaced-scaffold na na QXJP01000017.1 = NZ_QXJP01000017.1 Primary Assembly 83679 na Scaffold17_1 unplaced-scaffold na na QXJP01000018.1 = NZ_QXJP01000018.1 Primary Assembly 75183 na Scaffold18_1 unplaced-scaffold na na QXJP01000019.1 = NZ_QXJP01000019.1 Primary Assembly 74287 na Scaffold19_1 unplaced-scaffold na na QXJP01000020.1 = NZ_QXJP01000020.1 Primary Assembly 73360 na Scaffold20_1 unplaced-scaffold na na QXJP01000021.1 = NZ_QXJP01000021.1 Primary Assembly 65394 na Scaffold21_1 unplaced-scaffold na na QXJP01000022.1 = NZ_QXJP01000022.1 Primary Assembly 64324 na Scaffold22_1 unplaced-scaffold na na QXJP01000023.1 = NZ_QXJP01000023.1 Primary Assembly 62958 na Scaffold23_1 unplaced-scaffold na na QXJP01000024.1 = NZ_QXJP01000024.1 Primary Assembly 61790 na Scaffold24_1 unplaced-scaffold na na QXJP01000025.1 = NZ_QXJP01000025.1 Primary Assembly 5439 na Scaffold24_2 unplaced-scaffold na na QXJP01000026.1 = NZ_QXJP01000026.1 Primary Assembly 54888 na Scaffold25_1 unplaced-scaffold na na QXJP01000027.1 = NZ_QXJP01000027.1 Primary Assembly 57826 na Scaffold26_1 unplaced-scaffold na na QXJP01000028.1 = NZ_QXJP01000028.1 Primary Assembly 54644 na Scaffold27_1 unplaced-scaffold na na QXJP01000029.1 = NZ_QXJP01000029.1 Primary Assembly 48810 na Scaffold28_1 unplaced-scaffold na na QXJP01000030.1 = NZ_QXJP01000030.1 Primary Assembly 41194 na Scaffold29_1 unplaced-scaffold na na QXJP01000031.1 = NZ_QXJP01000031.1 Primary Assembly 31995 na Scaffold30_1 unplaced-scaffold na na QXJP01000032.1 = NZ_QXJP01000032.1 Primary Assembly 28810 na Scaffold31_1 unplaced-scaffold na na QXJP01000033.1 = NZ_QXJP01000033.1 Primary Assembly 26643 na Scaffold32_1 unplaced-scaffold na na QXJP01000034.1 = NZ_QXJP01000034.1 Primary Assembly 25250 na Scaffold33_1 unplaced-scaffold na na QXJP01000035.1 = NZ_QXJP01000035.1 Primary Assembly 24635 na Scaffold34_1 unplaced-scaffold na na QXJP01000036.1 = NZ_QXJP01000036.1 Primary Assembly 21486 na Scaffold35_1 unplaced-scaffold na na QXJP01000037.1 = NZ_QXJP01000037.1 Primary Assembly 13259 na Scaffold36_1 unplaced-scaffold na na QXJP01000038.1 = NZ_QXJP01000038.1 Primary Assembly 13166 na Scaffold37_1 unplaced-scaffold na na QXJP01000039.1 = NZ_QXJP01000039.1 Primary Assembly 9208 na Scaffold38_1 unplaced-scaffold na na QXJP01000040.1 = NZ_QXJP01000040.1 Primary Assembly 7556 na Scaffold39_1 unplaced-scaffold na na QXJP01000041.1 = NZ_QXJP01000041.1 Primary Assembly 4560 na Scaffold40_1 unplaced-scaffold na na QXJP01000042.1 = NZ_QXJP01000042.1 Primary Assembly 3591 na Scaffold41_1 unplaced-scaffold na na QXJP01000043.1 = NZ_QXJP01000043.1 Primary Assembly 3372 na Scaffold42_1 unplaced-scaffold na na QXJP01000044.1 = NZ_QXJP01000044.1 Primary Assembly 3021 na Scaffold43_1 unplaced-scaffold na na QXJP01000045.1 = NZ_QXJP01000045.1 Primary Assembly 2886 na Scaffold44_1 unplaced-scaffold na na QXJP01000046.1 = NZ_QXJP01000046.1 Primary Assembly 2694 na Scaffold45_1 unplaced-scaffold na na QXJP01000047.1 = NZ_QXJP01000047.1 Primary Assembly 2689 na Scaffold46_1 unplaced-scaffold na na QXJP01000048.1 = NZ_QXJP01000048.1 Primary Assembly 2555 na Scaffold47_1 unplaced-scaffold na na QXJP01000049.1 = NZ_QXJP01000049.1 Primary Assembly 2447 na Scaffold48_1 unplaced-scaffold na na QXJP01000050.1 = NZ_QXJP01000050.1 Primary Assembly 2195 na Scaffold49_1 unplaced-scaffold na na QXJP01000051.1 = NZ_QXJP01000051.1 Primary Assembly 2122 na Scaffold50_1 unplaced-scaffold na na QXJP01000052.1 = NZ_QXJP01000052.1 Primary Assembly 1817 na Scaffold51_1 unplaced-scaffold na na QXJP01000053.1 = NZ_QXJP01000053.1 Primary Assembly 1817 na Scaffold52_1 unplaced-scaffold na na QXJP01000054.1 = NZ_QXJP01000054.1 Primary Assembly 1626 na Scaffold53_1 unplaced-scaffold na na QXJP01000055.1 = NZ_QXJP01000055.1 Primary Assembly 1601 na Scaffold54_1 unplaced-scaffold na na QXJP01000056.1 = NZ_QXJP01000056.1 Primary Assembly 1376 na Scaffold55_1 unplaced-scaffold na na QXJP01000057.1 = NZ_QXJP01000057.1 Primary Assembly 1230 na Scaffold56_1 unplaced-scaffold na na QXJP01000058.1 = NZ_QXJP01000058.1 Primary Assembly 1170 na Scaffold57_1 unplaced-scaffold na na QXJP01000059.1 = NZ_QXJP01000059.1 Primary Assembly 1130 na Scaffold58_1 unplaced-scaffold na na QXJP01000060.1 = NZ_QXJP01000060.1 Primary Assembly 1072 na Scaffold59_1 unplaced-scaffold na na QXJP01000061.1 = NZ_QXJP01000061.1 Primary Assembly 1064 na Scaffold60_1 unplaced-scaffold na na QXJP01000062.1 = NZ_QXJP01000062.1 Primary Assembly 991 na Scaffold61_1 unplaced-scaffold na na QXJP01000063.1 = NZ_QXJP01000063.1 Primary Assembly 972 na Scaffold62_1 unplaced-scaffold na na QXJP01000064.1 = NZ_QXJP01000064.1 Primary Assembly 942 na Scaffold63_1 unplaced-scaffold na na QXJP01000065.1 = NZ_QXJP01000065.1 Primary Assembly 897 na Scaffold64_1 unplaced-scaffold na na QXJP01000066.1 = NZ_QXJP01000066.1 Primary Assembly 815 na Scaffold65_1 unplaced-scaffold na na QXJP01000067.1 = NZ_QXJP01000067.1 Primary Assembly 811 na Scaffold66_1 unplaced-scaffold na na QXJP01000068.1 = NZ_QXJP01000068.1 Primary Assembly 717 na Scaffold67_1 unplaced-scaffold na na QXJP01000069.1 = NZ_QXJP01000069.1 Primary Assembly 606 na Scaffold68_1 unplaced-scaffold na na QXJP01000070.1 = NZ_QXJP01000070.1 Primary Assembly 605 na Scaffold69_1 unplaced-scaffold na na QXJP01000071.1 = NZ_QXJP01000071.1 Primary Assembly 546 na Scaffold70_1 unplaced-scaffold na na QXJP01000072.1 = NZ_QXJP01000072.1 Primary Assembly 519 na Scaffold71_1 unplaced-scaffold na na QXJP01000073.1 = NZ_QXJP01000073.1 Primary Assembly 518 na Scaffold72_1 unplaced-scaffold na na QXJP01000074.1 = NZ_QXJP01000074.1 Primary Assembly 511 na