# Assembly name: ASM413810v1 # Organism name: Xylanivirga thermophila (firmicutes) # Infraspecific name: strain=SYSU GA17129 # Taxid: 2496273 # BioSample: SAMN10577372 # BioProject: PRJNA509280 # Submitter: Sun Yat-Sen University # Date: 2019-02-05 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: RXHQ01 # Assembly method: SOAP denovo v. 2.04 # Expected final version: yes # Genome coverage: 100.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_004138105.1 # RefSeq assembly accession: GCF_004138105.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004138115.1 GCF_004138115.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na RXHQ01000001.1 = NZ_RXHQ01000001.1 Primary Assembly 236975 na Scaffold2_1 unplaced-scaffold na na RXHQ01000002.1 = NZ_RXHQ01000002.1 Primary Assembly 220683 na Scaffold3_1 unplaced-scaffold na na RXHQ01000003.1 = NZ_RXHQ01000003.1 Primary Assembly 188385 na Scaffold4_1 unplaced-scaffold na na RXHQ01000004.1 = NZ_RXHQ01000004.1 Primary Assembly 152288 na Scaffold5_1 unplaced-scaffold na na RXHQ01000005.1 = NZ_RXHQ01000005.1 Primary Assembly 136197 na Scaffold6_1 unplaced-scaffold na na RXHQ01000006.1 = NZ_RXHQ01000006.1 Primary Assembly 131014 na Scaffold7_1 unplaced-scaffold na na RXHQ01000007.1 = NZ_RXHQ01000007.1 Primary Assembly 108089 na Scaffold8_1 unplaced-scaffold na na RXHQ01000008.1 = NZ_RXHQ01000008.1 Primary Assembly 107698 na Scaffold9_1 unplaced-scaffold na na RXHQ01000009.1 = NZ_RXHQ01000009.1 Primary Assembly 94922 na Scaffold10_1 unplaced-scaffold na na RXHQ01000010.1 = NZ_RXHQ01000010.1 Primary Assembly 1413 na Scaffold10_2 unplaced-scaffold na na RXHQ01000011.1 = NZ_RXHQ01000011.1 Primary Assembly 84939 na Scaffold11_1 unplaced-scaffold na na RXHQ01000012.1 = NZ_RXHQ01000012.1 Primary Assembly 83115 na Scaffold12_1 unplaced-scaffold na na RXHQ01000013.1 = NZ_RXHQ01000013.1 Primary Assembly 82192 na Scaffold13_1 unplaced-scaffold na na RXHQ01000014.1 = NZ_RXHQ01000014.1 Primary Assembly 68602 na Scaffold14_1 unplaced-scaffold na na RXHQ01000015.1 = NZ_RXHQ01000015.1 Primary Assembly 62074 na Scaffold15_1 unplaced-scaffold na na RXHQ01000016.1 = NZ_RXHQ01000016.1 Primary Assembly 61577 na Scaffold16_1 unplaced-scaffold na na RXHQ01000017.1 = NZ_RXHQ01000017.1 Primary Assembly 55341 na Scaffold17_1 unplaced-scaffold na na RXHQ01000018.1 = NZ_RXHQ01000018.1 Primary Assembly 51433 na Scaffold18_1 unplaced-scaffold na na RXHQ01000019.1 = NZ_RXHQ01000019.1 Primary Assembly 51338 na Scaffold19_1 unplaced-scaffold na na RXHQ01000020.1 = NZ_RXHQ01000020.1 Primary Assembly 48078 na Scaffold20_1 unplaced-scaffold na na RXHQ01000021.1 = NZ_RXHQ01000021.1 Primary Assembly 45310 na Scaffold21_1 unplaced-scaffold na na RXHQ01000022.1 = NZ_RXHQ01000022.1 Primary Assembly 43994 na Scaffold22_1 unplaced-scaffold na na RXHQ01000023.1 = NZ_RXHQ01000023.1 Primary Assembly 42821 na Scaffold23_1 unplaced-scaffold na na RXHQ01000024.1 = NZ_RXHQ01000024.1 Primary Assembly 42634 na Scaffold24_1 unplaced-scaffold na na RXHQ01000025.1 = NZ_RXHQ01000025.1 Primary Assembly 40747 na Scaffold25_1 unplaced-scaffold na na RXHQ01000026.1 = NZ_RXHQ01000026.1 Primary Assembly 40303 na Scaffold26_1 unplaced-scaffold na na RXHQ01000027.1 = NZ_RXHQ01000027.1 Primary Assembly 37982 na Scaffold27_1 unplaced-scaffold na na RXHQ01000028.1 = NZ_RXHQ01000028.1 Primary Assembly 36855 na Scaffold28_1 unplaced-scaffold na na RXHQ01000029.1 = NZ_RXHQ01000029.1 Primary Assembly 34512 na Scaffold29_1 unplaced-scaffold na na RXHQ01000030.1 = NZ_RXHQ01000030.1 Primary Assembly 33714 na Scaffold30_1 unplaced-scaffold na na RXHQ01000031.1 = NZ_RXHQ01000031.1 Primary Assembly 30700 na Scaffold31_1 unplaced-scaffold na na RXHQ01000032.1 = NZ_RXHQ01000032.1 Primary Assembly 30421 na Scaffold32_1 unplaced-scaffold na na RXHQ01000033.1 = NZ_RXHQ01000033.1 Primary Assembly 29773 na Scaffold33_1 unplaced-scaffold na na RXHQ01000034.1 = NZ_RXHQ01000034.1 Primary Assembly 28562 na Scaffold34_1 unplaced-scaffold na na RXHQ01000035.1 = NZ_RXHQ01000035.1 Primary Assembly 26856 na Scaffold35_1 unplaced-scaffold na na RXHQ01000036.1 = NZ_RXHQ01000036.1 Primary Assembly 26320 na Scaffold36_1 unplaced-scaffold na na RXHQ01000037.1 = NZ_RXHQ01000037.1 Primary Assembly 23570 na Scaffold37_1 unplaced-scaffold na na RXHQ01000038.1 = NZ_RXHQ01000038.1 Primary Assembly 23276 na Scaffold38_1 unplaced-scaffold na na RXHQ01000039.1 = NZ_RXHQ01000039.1 Primary Assembly 19287 na Scaffold39_1 unplaced-scaffold na na RXHQ01000040.1 = NZ_RXHQ01000040.1 Primary Assembly 18870 na Scaffold40_1 unplaced-scaffold na na RXHQ01000041.1 = NZ_RXHQ01000041.1 Primary Assembly 18052 na Scaffold41_1 unplaced-scaffold na na RXHQ01000042.1 = NZ_RXHQ01000042.1 Primary Assembly 17387 na Scaffold42_1 unplaced-scaffold na na RXHQ01000043.1 = NZ_RXHQ01000043.1 Primary Assembly 16463 na Scaffold43_1 unplaced-scaffold na na RXHQ01000044.1 = NZ_RXHQ01000044.1 Primary Assembly 16065 na Scaffold44_1 unplaced-scaffold na na RXHQ01000045.1 = NZ_RXHQ01000045.1 Primary Assembly 15202 na Scaffold45_1 unplaced-scaffold na na RXHQ01000046.1 = NZ_RXHQ01000046.1 Primary Assembly 14605 na Scaffold46_1 unplaced-scaffold na na RXHQ01000047.1 = NZ_RXHQ01000047.1 Primary Assembly 13477 na Scaffold47_1 unplaced-scaffold na na RXHQ01000048.1 = NZ_RXHQ01000048.1 Primary Assembly 12402 na Scaffold48_1 unplaced-scaffold na na RXHQ01000049.1 = NZ_RXHQ01000049.1 Primary Assembly 12270 na Scaffold49_1 unplaced-scaffold na na RXHQ01000050.1 = NZ_RXHQ01000050.1 Primary Assembly 10455 na Scaffold50_1 unplaced-scaffold na na RXHQ01000051.1 = NZ_RXHQ01000051.1 Primary Assembly 10124 na Scaffold51_1 unplaced-scaffold na na RXHQ01000052.1 = NZ_RXHQ01000052.1 Primary Assembly 9391 na Scaffold52_1 unplaced-scaffold na na RXHQ01000053.1 = NZ_RXHQ01000053.1 Primary Assembly 8019 na Scaffold53_1 unplaced-scaffold na na RXHQ01000054.1 = NZ_RXHQ01000054.1 Primary Assembly 6884 na Scaffold54_1 unplaced-scaffold na na RXHQ01000055.1 = NZ_RXHQ01000055.1 Primary Assembly 6834 na Scaffold55_1 unplaced-scaffold na na RXHQ01000056.1 = NZ_RXHQ01000056.1 Primary Assembly 6752 na Scaffold56_1 unplaced-scaffold na na RXHQ01000057.1 = NZ_RXHQ01000057.1 Primary Assembly 5066 na Scaffold57_1 unplaced-scaffold na na RXHQ01000058.1 = NZ_RXHQ01000058.1 Primary Assembly 4802 na Scaffold58_1 unplaced-scaffold na na RXHQ01000059.1 = NZ_RXHQ01000059.1 Primary Assembly 4664 na Scaffold59_1 unplaced-scaffold na na RXHQ01000060.1 = NZ_RXHQ01000060.1 Primary Assembly 4552 na Scaffold60_1 unplaced-scaffold na na RXHQ01000061.1 = NZ_RXHQ01000061.1 Primary Assembly 4372 na Scaffold61_1 unplaced-scaffold na na RXHQ01000062.1 = NZ_RXHQ01000062.1 Primary Assembly 4127 na Scaffold62_1 unplaced-scaffold na na RXHQ01000063.1 = NZ_RXHQ01000063.1 Primary Assembly 3532 na Scaffold63_1 unplaced-scaffold na na RXHQ01000064.1 = NZ_RXHQ01000064.1 Primary Assembly 3151 na Scaffold64_1 unplaced-scaffold na na RXHQ01000065.1 = NZ_RXHQ01000065.1 Primary Assembly 2490 na Scaffold65_1 unplaced-scaffold na na RXHQ01000066.1 = NZ_RXHQ01000066.1 Primary Assembly 2467 na Scaffold66_1 unplaced-scaffold na na RXHQ01000067.1 = NZ_RXHQ01000067.1 Primary Assembly 2178 na Scaffold67_1 unplaced-scaffold na na RXHQ01000068.1 = NZ_RXHQ01000068.1 Primary Assembly 1914 na Scaffold68_1 unplaced-scaffold na na RXHQ01000069.1 = NZ_RXHQ01000069.1 Primary Assembly 1883 na Scaffold69_1 unplaced-scaffold na na RXHQ01000070.1 = NZ_RXHQ01000070.1 Primary Assembly 1859 na Scaffold70_1 unplaced-scaffold na na RXHQ01000071.1 = NZ_RXHQ01000071.1 Primary Assembly 1796 na Scaffold71_1 unplaced-scaffold na na RXHQ01000072.1 = NZ_RXHQ01000072.1 Primary Assembly 1788 na Scaffold72_1 unplaced-scaffold na na RXHQ01000073.1 = NZ_RXHQ01000073.1 Primary Assembly 1772 na Scaffold73_1 unplaced-scaffold na na RXHQ01000074.1 = NZ_RXHQ01000074.1 Primary Assembly 1763 na Scaffold74_1 unplaced-scaffold na na RXHQ01000075.1 = NZ_RXHQ01000075.1 Primary Assembly 1607 na Scaffold75_1 unplaced-scaffold na na RXHQ01000076.1 = NZ_RXHQ01000076.1 Primary Assembly 1563 na Scaffold76_1 unplaced-scaffold na na RXHQ01000077.1 = NZ_RXHQ01000077.1 Primary Assembly 1330 na Scaffold77_1 unplaced-scaffold na na RXHQ01000078.1 = NZ_RXHQ01000078.1 Primary Assembly 848 na Scaffold78_1 unplaced-scaffold na na RXHQ01000079.1 = NZ_RXHQ01000079.1 Primary Assembly 575 na