# Assembly name: ASM477099v1 # Organism name: Leptospira idonii (bacteria) # Infraspecific name: strain=201300427 # Taxid: 1193500 # BioSample: SAMN10316364 # BioProject: PRJNA480513 # Submitter: INRS-Institut Armand-Frappier # Date: 2019-04-10 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: RQHW01 # Assembly method: SPAdes v. 3.7.0 # Expected final version: yes # Genome coverage: 50x # Sequencing technology: Illumina NextSeq 500 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_004770995.1 # RefSeq assembly accession: GCF_004770995.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004771015.1 GCF_004771015.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_73_covk_30.1646_covr_54.17_cutoff_40 unplaced-scaffold na na RQHW01000001.1 = NZ_RQHW01000001.1 Primary Assembly 958 na NODE_5_covk_41.1492_covr_83.50_cutoff_40 unplaced-scaffold na na RQHW01000002.1 = NZ_RQHW01000002.1 Primary Assembly 232495 na NODE_15_covk_42.8363_covr_87.34_cutoff_40 unplaced-scaffold na na RQHW01000003.1 = NZ_RQHW01000003.1 Primary Assembly 130711 na NODE_76_covk_58.8382_covr_98.80_cutoff_40 unplaced-scaffold na na RQHW01000004.1 = NZ_RQHW01000004.1 Primary Assembly 930 na NODE_52_covk_34.1767_covr_65.45_cutoff_40 unplaced-scaffold na na RQHW01000005.1 = NZ_RQHW01000005.1 Primary Assembly 2431 na NODE_54_covk_43.8037_covr_84.72_cutoff_40 unplaced-scaffold na na RQHW01000006.1 = NZ_RQHW01000006.1 Primary Assembly 2125 na NODE_22_covk_41.5114_covr_84.36_cutoff_40 unplaced-scaffold na na RQHW01000007.1 = NZ_RQHW01000007.1 Primary Assembly 32969 na NODE_11_covk_39.882_covr_80.86_cutoff_40 unplaced-scaffold na na RQHW01000008.1 = NZ_RQHW01000008.1 Primary Assembly 156221 na NODE_37_covk_36.544_covr_70.72_cutoff_40 unplaced-scaffold na na RQHW01000009.1 = NZ_RQHW01000009.1 Primary Assembly 7070 na NODE_14_covk_39.097_covr_79.47_cutoff_40 unplaced-scaffold na na RQHW01000010.1 = NZ_RQHW01000010.1 Primary Assembly 131007 na NODE_42_covk_25.2962_covr_49.97_cutoff_40 unplaced-scaffold na na RQHW01000011.1 = NZ_RQHW01000011.1 Primary Assembly 5331 na NODE_71_covk_62.9346_covr_110.07_cutoff_40 unplaced-scaffold na na RQHW01000012.1 = NZ_RQHW01000012.1 Primary Assembly 994 na NODE_4_covk_43.0009_covr_87.47_cutoff_40 unplaced-scaffold na na RQHW01000013.1 = NZ_RQHW01000013.1 Primary Assembly 251864 na NODE_41_covk_41.8351_covr_81.50_cutoff_40 unplaced-scaffold na na RQHW01000014.1 = NZ_RQHW01000014.1 Primary Assembly 5977 na NODE_19_covk_39.0543_covr_79.47_cutoff_40 unplaced-scaffold na na RQHW01000015.1 = NZ_RQHW01000015.1 Primary Assembly 45632 na NODE_6_covk_37.7856_covr_76.57_cutoff_40 unplaced-scaffold na na RQHW01000016.1 = NZ_RQHW01000016.1 Primary Assembly 223016 na NODE_62_covk_35.6605_covr_66.31_cutoff_40 unplaced-scaffold na na RQHW01000017.1 = NZ_RQHW01000017.1 Primary Assembly 1320 na NODE_12_covk_39.4155_covr_79.81_cutoff_40 unplaced-scaffold na na RQHW01000018.1 = NZ_RQHW01000018.1 Primary Assembly 141733 na NODE_90_covk_37.0271_covr_53.96_cutoff_40 unplaced-scaffold na na RQHW01000019.1 = NZ_RQHW01000019.1 Primary Assembly 335 na NODE_69_covk_29.9522_covr_51.24_cutoff_40 unplaced-scaffold na na RQHW01000020.1 = NZ_RQHW01000020.1 Primary Assembly 1123 na NODE_89_covk_37.5969_covr_53.04_cutoff_40 unplaced-scaffold na na RQHW01000021.1 = NZ_RQHW01000021.1 Primary Assembly 335 na NODE_79_covk_37.2492_covr_45.03_cutoff_40 unplaced-scaffold na na RQHW01000022.1 = NZ_RQHW01000022.1 Primary Assembly 727 na NODE_17_covk_43.1865_covr_87.76_cutoff_40 unplaced-scaffold na na RQHW01000023.1 = NZ_RQHW01000023.1 Primary Assembly 63458 na NODE_63_covk_32.9738_covr_57.92_cutoff_40 unplaced-scaffold na na RQHW01000024.1 = NZ_RQHW01000024.1 Primary Assembly 1259 na NODE_56_covk_49.6834_covr_93.16_cutoff_40 unplaced-scaffold na na RQHW01000025.1 = NZ_RQHW01000025.1 Primary Assembly 2004 na NODE_18_covk_41.1343_covr_82.95_cutoff_40 unplaced-scaffold na na RQHW01000026.1 = NZ_RQHW01000026.1 Primary Assembly 49476 na NODE_29_covk_37.5775_covr_75.45_cutoff_40 unplaced-scaffold na na RQHW01000027.1 = NZ_RQHW01000027.1 Primary Assembly 14987 na NODE_3_covk_39.5669_covr_79.98_cutoff_40 unplaced-scaffold na na RQHW01000028.1 = NZ_RQHW01000028.1 Primary Assembly 265485 na NODE_28_covk_36.7705_covr_72.59_cutoff_40 unplaced-scaffold na na RQHW01000029.1 = NZ_RQHW01000029.1 Primary Assembly 15641 na NODE_43_covk_51.0343_covr_99.64_cutoff_40 unplaced-scaffold na na RQHW01000030.1 = NZ_RQHW01000030.1 Primary Assembly 4918 na NODE_7_covk_42.3416_covr_85.99_cutoff_40 unplaced-scaffold na na RQHW01000031.1 = NZ_RQHW01000031.1 Primary Assembly 195150 na NODE_16_covk_41.4202_covr_85.02_cutoff_40 unplaced-scaffold na na RQHW01000032.1 = NZ_RQHW01000032.1 Primary Assembly 73242 na NODE_13_covk_40.3292_covr_82.00_cutoff_40 unplaced-scaffold na na RQHW01000033.1 = NZ_RQHW01000033.1 Primary Assembly 133749 na NODE_20_covk_41.3866_covr_83.98_cutoff_40 unplaced-scaffold na na RQHW01000034.1 = NZ_RQHW01000034.1 Primary Assembly 39877 na NODE_35_covk_39.2799_covr_78.81_cutoff_40 unplaced-scaffold na na RQHW01000035.1 = NZ_RQHW01000035.1 Primary Assembly 8554 na NODE_30_covk_35.8298_covr_69.91_cutoff_40 unplaced-scaffold na na RQHW01000036.1 = NZ_RQHW01000036.1 Primary Assembly 15066 na NODE_36_covk_44.9227_covr_90.45_cutoff_40 unplaced-scaffold na na RQHW01000037.1 = NZ_RQHW01000037.1 Primary Assembly 7395 na NODE_68_covk_61.6341_covr_113.93_cutoff_40 unplaced-scaffold na na RQHW01000038.1 = NZ_RQHW01000038.1 Primary Assembly 1140 na NODE_72_covk_51.5563_covr_88.27_cutoff_40 unplaced-scaffold na na RQHW01000039.1 = NZ_RQHW01000039.1 Primary Assembly 992 na NODE_45_covk_24.9878_covr_49.63_cutoff_40 unplaced-scaffold na na RQHW01000040.1 = NZ_RQHW01000040.1 Primary Assembly 4102 na NODE_81_covk_76.5514_covr_126.60_cutoff_40 unplaced-scaffold na na RQHW01000041.1 = NZ_RQHW01000041.1 Primary Assembly 690 na NODE_2_covk_42.6286_covr_86.63_cutoff_40 unplaced-scaffold na na RQHW01000042.1 = NZ_RQHW01000042.1 Primary Assembly 270657 na NODE_27_covk_30.96_covr_62.82_cutoff_40 unplaced-scaffold na na RQHW01000043.1 = NZ_RQHW01000043.1 Primary Assembly 16231 na NODE_87_covk_39.7554_covr_47.27_cutoff_40 unplaced-scaffold na na RQHW01000044.1 = NZ_RQHW01000044.1 Primary Assembly 355 na NODE_26_covk_34.2808_covr_69.81_cutoff_40 unplaced-scaffold na na RQHW01000045.1 = NZ_RQHW01000045.1 Primary Assembly 17461 na NODE_65_covk_84.3792_covr_146.30_cutoff_40 unplaced-scaffold na na RQHW01000046.1 = NZ_RQHW01000046.1 Primary Assembly 1211 na NODE_1_covk_37.2262_covr_75.61_cutoff_40 unplaced-scaffold na na RQHW01000047.1 = NZ_RQHW01000047.1 Primary Assembly 762349 na NODE_25_covk_41.8082_covr_85.15_cutoff_40 unplaced-scaffold na na RQHW01000048.1 = NZ_RQHW01000048.1 Primary Assembly 29825 na NODE_33_covk_49.3126_covr_101.50_cutoff_40 unplaced-scaffold na na RQHW01000049.1 = NZ_RQHW01000049.1 Primary Assembly 13812 na NODE_64_covk_88.4764_covr_154.87_cutoff_40 unplaced-scaffold na na RQHW01000050.1 = NZ_RQHW01000050.1 Primary Assembly 1240 na NODE_21_covk_36.4019_covr_73.99_cutoff_40 unplaced-scaffold na na RQHW01000051.1 = NZ_RQHW01000051.1 Primary Assembly 33843 na NODE_47_covk_45.2412_covr_88.48_cutoff_40 unplaced-scaffold na na RQHW01000052.1 = NZ_RQHW01000052.1 Primary Assembly 3406 na NODE_92_covk_49.5595_covr_67.14_cutoff_40 unplaced-scaffold na na RQHW01000053.1 = NZ_RQHW01000053.1 Primary Assembly 329 na NODE_50_covk_44.0706_covr_84.55_cutoff_40 unplaced-scaffold na na RQHW01000054.1 = NZ_RQHW01000054.1 Primary Assembly 2541 na NODE_38_covk_32.7501_covr_64.98_cutoff_40 unplaced-scaffold na na RQHW01000055.1 = NZ_RQHW01000055.1 Primary Assembly 6833 na NODE_75_covk_39.1647_covr_72.57_cutoff_40 unplaced-scaffold na na RQHW01000056.1 = NZ_RQHW01000056.1 Primary Assembly 939 na NODE_66_covk_37.1258_covr_68.74_cutoff_40 unplaced-scaffold na na RQHW01000057.1 = NZ_RQHW01000057.1 Primary Assembly 1166 na NODE_23_covk_41.8079_covr_84.57_cutoff_40 unplaced-scaffold na na RQHW01000058.1 = NZ_RQHW01000058.1 Primary Assembly 31874 na NODE_80_covk_34.6619_covr_49.58_cutoff_40 unplaced-scaffold na na RQHW01000059.1 = NZ_RQHW01000059.1 Primary Assembly 701 na NODE_55_covk_39.594_covr_76.10_cutoff_40 unplaced-scaffold na na RQHW01000060.1 = NZ_RQHW01000060.1 Primary Assembly 2035 na NODE_59_covk_35.8852_covr_69.55_cutoff_40 unplaced-scaffold na na RQHW01000061.1 = NZ_RQHW01000061.1 Primary Assembly 1924 na NODE_67_covk_30.2323_covr_56.94_cutoff_40 unplaced-scaffold na na RQHW01000062.1 = NZ_RQHW01000062.1 Primary Assembly 1166 na NODE_53_covk_30.1751_covr_58.59_cutoff_40 unplaced-scaffold na na RQHW01000063.1 = NZ_RQHW01000063.1 Primary Assembly 2127 na NODE_49_covk_49.4791_covr_89.31_cutoff_40 unplaced-scaffold na na RQHW01000064.1 = NZ_RQHW01000064.1 Primary Assembly 3043 na NODE_9_covk_38.9186_covr_79.03_cutoff_40 unplaced-scaffold na na RQHW01000065.1 = NZ_RQHW01000065.1 Primary Assembly 171832 na NODE_40_covk_32.6484_covr_65.01_cutoff_40 unplaced-scaffold na na RQHW01000066.1 = NZ_RQHW01000066.1 Primary Assembly 6104 na NODE_70_covk_51.9642_covr_96.93_cutoff_40 unplaced-scaffold na na RQHW01000067.1 = NZ_RQHW01000067.1 Primary Assembly 1054 na NODE_83_covk_65.402_covr_76.40_cutoff_40 unplaced-scaffold na na RQHW01000068.1 = NZ_RQHW01000068.1 Primary Assembly 567 na NODE_51_covk_19.688_covr_40.78_cutoff_40 unplaced-scaffold na na RQHW01000069.1 = NZ_RQHW01000069.1 Primary Assembly 2481 na NODE_34_covk_42.0625_covr_82.91_cutoff_40 unplaced-scaffold na na RQHW01000070.1 = NZ_RQHW01000070.1 Primary Assembly 13041 na NODE_74_covk_35.8491_covr_64.58_cutoff_40 unplaced-scaffold na na RQHW01000071.1 = NZ_RQHW01000071.1 Primary Assembly 945 na NODE_48_covk_24.2644_covr_48.16_cutoff_40 unplaced-scaffold na na RQHW01000072.1 = NZ_RQHW01000072.1 Primary Assembly 3148 na NODE_61_covk_29.8168_covr_58.55_cutoff_40 unplaced-scaffold na na RQHW01000073.1 = NZ_RQHW01000073.1 Primary Assembly 1567 na NODE_86_covk_36.0603_covr_51.24_cutoff_40 unplaced-scaffold na na RQHW01000074.1 = NZ_RQHW01000074.1 Primary Assembly 392 na NODE_82_covk_59.9478_covr_90.52_cutoff_40 unplaced-scaffold na na RQHW01000075.1 = NZ_RQHW01000075.1 Primary Assembly 594 na NODE_77_covk_23.2941_covr_42.48_cutoff_40 unplaced-scaffold na na RQHW01000076.1 = NZ_RQHW01000076.1 Primary Assembly 927 na NODE_60_covk_34.5054_covr_67.40_cutoff_40 unplaced-scaffold na na RQHW01000077.1 = NZ_RQHW01000077.1 Primary Assembly 1832 na NODE_10_covk_41.921_covr_85.21_cutoff_40 unplaced-scaffold na na RQHW01000078.1 = NZ_RQHW01000078.1 Primary Assembly 168343 na NODE_8_covk_42.6647_covr_86.59_cutoff_40 unplaced-scaffold na na RQHW01000079.1 = NZ_RQHW01000079.1 Primary Assembly 172627 na NODE_32_covk_35.5009_covr_71.89_cutoff_40 unplaced-scaffold na na RQHW01000080.1 = NZ_RQHW01000080.1 Primary Assembly 13955 na NODE_31_covk_32.3082_covr_65.67_cutoff_40 unplaced-scaffold na na RQHW01000081.1 = NZ_RQHW01000081.1 Primary Assembly 14907 na NODE_24_covk_40.7154_covr_82.82_cutoff_40 unplaced-scaffold na na RQHW01000082.1 = NZ_RQHW01000082.1 Primary Assembly 29859 na NODE_39_covk_38.4018_covr_61.48_cutoff_40 unplaced-scaffold na na RQHW01000083.1 = NZ_RQHW01000083.1 Primary Assembly 6297 na