# Assembly name: ASM477100v1 # Organism name: Leptospira ilyithenensis (bacteria) # Infraspecific name: strain=201400974 # Taxid: 2484901 # BioSample: SAMN10316365 # BioProject: PRJNA480513 # Submitter: INRS-Institut Armand-Frappier # Date: 2019-04-10 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: RQHV01 # Assembly method: SPAdes v. 3.7.0 # Expected final version: yes # Genome coverage: 50x # Sequencing technology: Illumina NextSeq 500 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_004771005.1 # RefSeq assembly accession: GCF_004771005.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004771025.1 GCF_004771025.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_15_covk_44.8032_covr_87.80_cutoff_51 unplaced-scaffold na na RQHV01000001.1 = NZ_RQHV01000001.1 Primary Assembly 77967 na NODE_5_covk_45.0713_covr_88.61_cutoff_51 unplaced-scaffold na na RQHV01000002.1 = NZ_RQHV01000002.1 Primary Assembly 266913 na NODE_116_covk_42.4737_covr_61.84_cutoff_51 unplaced-scaffold na na RQHV01000003.1 = NZ_RQHV01000003.1 Primary Assembly 301 na NODE_29_covk_45.9932_covr_89.86_cutoff_51 unplaced-scaffold na na RQHV01000004.1 = NZ_RQHV01000004.1 Primary Assembly 11789 na NODE_23_covk_44.8038_covr_87.90_cutoff_51 unplaced-scaffold na na RQHV01000005.1 = NZ_RQHV01000005.1 Primary Assembly 35702 na NODE_63_covk_120.55_covr_177.95_cutoff_51 unplaced-scaffold na na RQHV01000006.1 = NZ_RQHV01000006.1 Primary Assembly 679 na NODE_8_covk_46.0333_covr_90.15_cutoff_51 unplaced-scaffold na na RQHV01000007.1 = NZ_RQHV01000007.1 Primary Assembly 161268 na NODE_67_covk_83.6511_covr_102.75_cutoff_51 unplaced-scaffold na na RQHV01000008.1 = NZ_RQHV01000008.1 Primary Assembly 499 na NODE_38_covk_49.1643_covr_83.98_cutoff_51 unplaced-scaffold na na RQHV01000009.1 = NZ_RQHV01000009.1 Primary Assembly 2933 na NODE_61_covk_84.724_covr_111.32_cutoff_51 unplaced-scaffold na na RQHV01000010.1 = NZ_RQHV01000010.1 Primary Assembly 747 na NODE_69_covk_42.6934_covr_59.19_cutoff_51 unplaced-scaffold na na RQHV01000011.1 = NZ_RQHV01000011.1 Primary Assembly 484 na NODE_48_covk_69.1187_covr_119.21_cutoff_51 unplaced-scaffold na na RQHV01000012.1 = NZ_RQHV01000012.1 Primary Assembly 1741 na NODE_55_covk_66.7941_covr_115.52_cutoff_51 unplaced-scaffold na na RQHV01000013.1 = NZ_RQHV01000013.1 Primary Assembly 1049 na NODE_19_covk_46.3133_covr_90.46_cutoff_51 unplaced-scaffold na na RQHV01000014.1 = NZ_RQHV01000014.1 Primary Assembly 44081 na NODE_36_covk_52.7696_covr_96.75_cutoff_51 unplaced-scaffold na na RQHV01000015.1 = NZ_RQHV01000015.1 Primary Assembly 4261 na NODE_21_covk_44.9541_covr_87.81_cutoff_51 unplaced-scaffold na na RQHV01000016.1 = NZ_RQHV01000016.1 Primary Assembly 39541 na NODE_39_covk_47.4237_covr_84.31_cutoff_51 unplaced-scaffold na na RQHV01000017.1 = NZ_RQHV01000017.1 Primary Assembly 2733 na NODE_27_covk_41.1787_covr_80.64_cutoff_51 unplaced-scaffold na na RQHV01000018.1 = NZ_RQHV01000018.1 Primary Assembly 21921 na NODE_81_covk_65.0714_covr_75.49_cutoff_51 unplaced-scaffold na na RQHV01000019.1 = NZ_RQHV01000019.1 Primary Assembly 409 na NODE_65_covk_75.2827_covr_105.69_cutoff_51 unplaced-scaffold na na RQHV01000020.1 = NZ_RQHV01000020.1 Primary Assembly 547 na NODE_18_covk_44.1371_covr_86.00_cutoff_51 unplaced-scaffold na na RQHV01000021.1 = NZ_RQHV01000021.1 Primary Assembly 50064 na NODE_91_covk_75.6918_covr_65.11_cutoff_51 unplaced-scaffold na na RQHV01000022.1 = NZ_RQHV01000022.1 Primary Assembly 352 na NODE_22_covk_43.9866_covr_85.83_cutoff_51 unplaced-scaffold na na RQHV01000023.1 = NZ_RQHV01000023.1 Primary Assembly 39163 na NODE_46_covk_47.3602_covr_79.68_cutoff_51 unplaced-scaffold na na RQHV01000024.1 = NZ_RQHV01000024.1 Primary Assembly 2005 na NODE_73_covk_42.6286_covr_59.60_cutoff_51 unplaced-scaffold na na RQHV01000025.1 = NZ_RQHV01000025.1 Primary Assembly 450 na NODE_53_covk_44.2612_covr_73.26_cutoff_51 unplaced-scaffold na na RQHV01000026.1 = NZ_RQHV01000026.1 Primary Assembly 1126 na NODE_20_covk_47.7406_covr_93.17_cutoff_51 unplaced-scaffold na na RQHV01000027.1 = NZ_RQHV01000027.1 Primary Assembly 43203 na NODE_45_covk_63.7938_covr_111.14_cutoff_51 unplaced-scaffold na na RQHV01000028.1 = NZ_RQHV01000028.1 Primary Assembly 2042 na NODE_13_covk_42.274_covr_82.96_cutoff_51 unplaced-scaffold na na RQHV01000029.1 = NZ_RQHV01000029.1 Primary Assembly 104325 na NODE_57_covk_53.298_covr_91.10_cutoff_51 unplaced-scaffold na na RQHV01000030.1 = NZ_RQHV01000030.1 Primary Assembly 942 na NODE_40_covk_48.0108_covr_90.56_cutoff_51 unplaced-scaffold na na RQHV01000031.1 = NZ_RQHV01000031.1 Primary Assembly 2523 na NODE_12_covk_46.4595_covr_91.25_cutoff_51 unplaced-scaffold na na RQHV01000032.1 = NZ_RQHV01000032.1 Primary Assembly 117002 na NODE_44_covk_53.494_covr_101.19_cutoff_51 unplaced-scaffold na na RQHV01000033.1 = NZ_RQHV01000033.1 Primary Assembly 2073 na NODE_30_covk_43.4379_covr_83.59_cutoff_51 unplaced-scaffold na na RQHV01000034.1 = NZ_RQHV01000034.1 Primary Assembly 10916 na NODE_51_covk_56.7759_covr_85.56_cutoff_51 unplaced-scaffold na na RQHV01000035.1 = NZ_RQHV01000035.1 Primary Assembly 1291 na NODE_6_covk_43.1157_covr_84.39_cutoff_51 unplaced-scaffold na na RQHV01000036.1 = NZ_RQHV01000036.1 Primary Assembly 225636 na NODE_28_covk_42.1401_covr_81.06_cutoff_51 unplaced-scaffold na na RQHV01000037.1 = NZ_RQHV01000037.1 Primary Assembly 14358 na NODE_9_covk_44.114_covr_86.40_cutoff_51 unplaced-scaffold na na RQHV01000038.1 = NZ_RQHV01000038.1 Primary Assembly 158046 na NODE_387_covk_53.8481_covr_51.74_cutoff_51 unplaced-scaffold na na RQHV01000039.1 = NZ_RQHV01000039.1 Primary Assembly 231 na NODE_56_covk_42.1884_covr_79.16_cutoff_51 unplaced-scaffold na na RQHV01000040.1 = NZ_RQHV01000040.1 Primary Assembly 949 na NODE_33_covk_43.9498_covr_85.60_cutoff_51 unplaced-scaffold na na RQHV01000041.1 = NZ_RQHV01000041.1 Primary Assembly 9321 na NODE_3_covk_46.6383_covr_91.68_cutoff_51 unplaced-scaffold na na RQHV01000042.1 = NZ_RQHV01000042.1 Primary Assembly 378206 na NODE_4_covk_44.6946_covr_87.71_cutoff_51 unplaced-scaffold na na RQHV01000043.1 = NZ_RQHV01000043.1 Primary Assembly 333606 na NODE_43_covk_39.9956_covr_73.36_cutoff_51 unplaced-scaffold na na RQHV01000044.1 = NZ_RQHV01000044.1 Primary Assembly 2120 na NODE_16_covk_44.0164_covr_86.30_cutoff_51 unplaced-scaffold na na RQHV01000045.1 = NZ_RQHV01000045.1 Primary Assembly 66185 na NODE_31_covk_49.6528_covr_96.80_cutoff_51 unplaced-scaffold na na RQHV01000046.1 = NZ_RQHV01000046.1 Primary Assembly 10436 na NODE_79_covk_38.3846_covr_52.88_cutoff_51 unplaced-scaffold na na RQHV01000047.1 = NZ_RQHV01000047.1 Primary Assembly 424 na NODE_25_covk_46.0741_covr_90.15_cutoff_51 unplaced-scaffold na na RQHV01000048.1 = NZ_RQHV01000048.1 Primary Assembly 32644 na NODE_10_covk_43.5709_covr_85.56_cutoff_51 unplaced-scaffold na na RQHV01000049.1 = NZ_RQHV01000049.1 Primary Assembly 148676 na NODE_7_covk_46.0329_covr_90.47_cutoff_51 unplaced-scaffold na na RQHV01000050.1 = NZ_RQHV01000050.1 Primary Assembly 209468 na NODE_26_covk_44.0301_covr_85.30_cutoff_51 unplaced-scaffold na na RQHV01000051.1 = NZ_RQHV01000051.1 Primary Assembly 22445 na NODE_14_covk_45.1197_covr_89.14_cutoff_51 unplaced-scaffold na na RQHV01000052.1 = NZ_RQHV01000052.1 Primary Assembly 80306 na NODE_17_covk_44.1864_covr_86.54_cutoff_51 unplaced-scaffold na na RQHV01000053.1 = NZ_RQHV01000053.1 Primary Assembly 59325 na NODE_37_covk_34.4447_covr_64.94_cutoff_51 unplaced-scaffold na na RQHV01000054.1 = NZ_RQHV01000054.1 Primary Assembly 3221 na NODE_62_covk_44.8562_covr_61.68_cutoff_51 unplaced-scaffold na na RQHV01000055.1 = NZ_RQHV01000055.1 Primary Assembly 706 na NODE_32_covk_53.3316_covr_82.63_cutoff_51 unplaced-scaffold na na RQHV01000056.1 = NZ_RQHV01000056.1 Primary Assembly 9793 na NODE_54_covk_38.4171_covr_63.73_cutoff_51 unplaced-scaffold na na RQHV01000057.1 = NZ_RQHV01000057.1 Primary Assembly 1056 na NODE_75_covk_76.6425_covr_81.65_cutoff_51 unplaced-scaffold na na RQHV01000058.1 = NZ_RQHV01000058.1 Primary Assembly 431 na NODE_24_covk_46.8551_covr_91.95_cutoff_51 unplaced-scaffold na na RQHV01000059.1 = NZ_RQHV01000059.1 Primary Assembly 35451 na NODE_41_covk_83.4234_covr_153.35_cutoff_51 unplaced-scaffold na na RQHV01000060.1 = NZ_RQHV01000060.1 Primary Assembly 2272 na NODE_1_covk_41.3873_covr_81.29_cutoff_51 unplaced-scaffold na na RQHV01000061.1 = NZ_RQHV01000061.1 Primary Assembly 712074 na NODE_2_covk_45.6952_covr_89.43_cutoff_51 unplaced-scaffold na na RQHV01000062.1 = NZ_RQHV01000062.1 Primary Assembly 474384 na NODE_59_covk_44.1924_covr_54.44_cutoff_51 unplaced-scaffold na na RQHV01000063.1 = NZ_RQHV01000063.1 Primary Assembly 785 na NODE_42_covk_44.5189_covr_83.52_cutoff_51 unplaced-scaffold na na RQHV01000064.1 = NZ_RQHV01000064.1 Primary Assembly 2187 na NODE_52_covk_44.9719_covr_93.41_cutoff_51 unplaced-scaffold na na RQHV01000065.1 = NZ_RQHV01000065.1 Primary Assembly 1210 na NODE_11_covk_46.4466_covr_91.25_cutoff_51 unplaced-scaffold na na RQHV01000066.1 = NZ_RQHV01000066.1 Primary Assembly 147006 na NODE_35_covk_44.2304_covr_84.30_cutoff_51 unplaced-scaffold na na RQHV01000067.1 = NZ_RQHV01000067.1 Primary Assembly 4787 na NODE_47_covk_89.1023_covr_174.27_cutoff_51 unplaced-scaffold na na RQHV01000068.1 = NZ_RQHV01000068.1 Primary Assembly 1959 na NODE_66_covk_123.245_covr_179.19_cutoff_51 unplaced-scaffold na na RQHV01000069.1 = NZ_RQHV01000069.1 Primary Assembly 539 na NODE_70_covk_41.339_covr_57.44_cutoff_51 unplaced-scaffold na na RQHV01000070.1 = NZ_RQHV01000070.1 Primary Assembly 483 na NODE_34_covk_47.0362_covr_84.98_cutoff_51 unplaced-scaffold na na RQHV01000071.1 = NZ_RQHV01000071.1 Primary Assembly 5381 na NODE_49_covk_44.5889_covr_77.53_cutoff_51 unplaced-scaffold na na RQHV01000072.1 = NZ_RQHV01000072.1 Primary Assembly 1664 na NODE_60_covk_51.7361_covr_93.96_cutoff_51 unplaced-scaffold na na RQHV01000073.1 = NZ_RQHV01000073.1 Primary Assembly 774 na NODE_111_covk_74.0987_covr_70.01_cutoff_51 unplaced-scaffold na na RQHV01000074.1 = NZ_RQHV01000074.1 Primary Assembly 306 na