# Assembly name: ASM540516v1 # Organism name: Loigolactobacillus binensis (firmicutes) # Infraspecific name: strain=735-2 # Taxid: 2559922 # BioSample: SAMD00164304 # BioProject: PRJDB7793 # Submitter: Northeast Agricultural University # Date: 2019-03-29 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: BJDN01 # Assembly method: SPAdes # Genome coverage: 304x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_005405165.1 # RefSeq assembly accession: GCF_005405165.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_005405175.1 GCF_005405175.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold1 unplaced-scaffold na na BJDN01000001.1 = NZ_BJDN01000001.1 Primary Assembly 203368 na scaffold2 unplaced-scaffold na na BJDN01000002.1 = NZ_BJDN01000002.1 Primary Assembly 163695 na scaffold3 unplaced-scaffold na na BJDN01000003.1 = NZ_BJDN01000003.1 Primary Assembly 163012 na scaffold4 unplaced-scaffold na na BJDN01000004.1 = NZ_BJDN01000004.1 Primary Assembly 155874 na scaffold5 unplaced-scaffold na na BJDN01000005.1 = NZ_BJDN01000005.1 Primary Assembly 143150 na scaffold6 unplaced-scaffold na na BJDN01000006.1 = NZ_BJDN01000006.1 Primary Assembly 111442 na scaffold7 unplaced-scaffold na na BJDN01000007.1 = NZ_BJDN01000007.1 Primary Assembly 103331 na scaffold8 unplaced-scaffold na na BJDN01000008.1 = NZ_BJDN01000008.1 Primary Assembly 96621 na scaffold9 unplaced-scaffold na na BJDN01000009.1 = NZ_BJDN01000009.1 Primary Assembly 92333 na scaffold10 unplaced-scaffold na na BJDN01000010.1 = NZ_BJDN01000010.1 Primary Assembly 87546 na scaffold11 unplaced-scaffold na na BJDN01000011.1 = NZ_BJDN01000011.1 Primary Assembly 84132 na scaffold12 unplaced-scaffold na na BJDN01000012.1 = NZ_BJDN01000012.1 Primary Assembly 80161 na scaffold13 unplaced-scaffold na na BJDN01000013.1 = NZ_BJDN01000013.1 Primary Assembly 76956 na scaffold14 unplaced-scaffold na na BJDN01000014.1 = NZ_BJDN01000014.1 Primary Assembly 75750 na scaffold15 unplaced-scaffold na na BJDN01000015.1 = NZ_BJDN01000015.1 Primary Assembly 66630 na scaffold16 unplaced-scaffold na na BJDN01000016.1 = NZ_BJDN01000016.1 Primary Assembly 63825 na scaffold17 unplaced-scaffold na na BJDN01000017.1 = NZ_BJDN01000017.1 Primary Assembly 60062 na scaffold18 unplaced-scaffold na na BJDN01000018.1 = NZ_BJDN01000018.1 Primary Assembly 57331 na scaffold19 unplaced-scaffold na na BJDN01000019.1 = NZ_BJDN01000019.1 Primary Assembly 57320 na scaffold20 unplaced-scaffold na na BJDN01000020.1 = NZ_BJDN01000020.1 Primary Assembly 57117 na scaffold21 unplaced-scaffold na na BJDN01000021.1 = NZ_BJDN01000021.1 Primary Assembly 52072 na scaffold22 unplaced-scaffold na na BJDN01000022.1 = NZ_BJDN01000022.1 Primary Assembly 51927 na scaffold23 unplaced-scaffold na na BJDN01000023.1 = NZ_BJDN01000023.1 Primary Assembly 48422 na scaffold24 unplaced-scaffold na na BJDN01000024.1 = NZ_BJDN01000024.1 Primary Assembly 47640 na scaffold25 unplaced-scaffold na na BJDN01000025.1 = NZ_BJDN01000025.1 Primary Assembly 40404 na scaffold26 unplaced-scaffold na na BJDN01000026.1 = NZ_BJDN01000026.1 Primary Assembly 39465 na scaffold27 unplaced-scaffold na na BJDN01000027.1 = NZ_BJDN01000027.1 Primary Assembly 34840 na scaffold28 unplaced-scaffold na na BJDN01000028.1 = NZ_BJDN01000028.1 Primary Assembly 34576 na scaffold29 unplaced-scaffold na na BJDN01000029.1 = NZ_BJDN01000029.1 Primary Assembly 32690 na scaffold30 unplaced-scaffold na na BJDN01000030.1 = NZ_BJDN01000030.1 Primary Assembly 32041 na scaffold31 unplaced-scaffold na na BJDN01000031.1 = NZ_BJDN01000031.1 Primary Assembly 31366 na scaffold32 unplaced-scaffold na na BJDN01000032.1 = NZ_BJDN01000032.1 Primary Assembly 31146 na scaffold33 unplaced-scaffold na na BJDN01000033.1 = NZ_BJDN01000033.1 Primary Assembly 30553 na scaffold34 unplaced-scaffold na na BJDN01000034.1 = NZ_BJDN01000034.1 Primary Assembly 28110 na scaffold35 unplaced-scaffold na na BJDN01000035.1 = NZ_BJDN01000035.1 Primary Assembly 27619 na scaffold36 unplaced-scaffold na na BJDN01000036.1 = NZ_BJDN01000036.1 Primary Assembly 25416 na scaffold37 unplaced-scaffold na na BJDN01000037.1 = NZ_BJDN01000037.1 Primary Assembly 21182 na scaffold38 unplaced-scaffold na na BJDN01000038.1 = NZ_BJDN01000038.1 Primary Assembly 19813 na scaffold39 unplaced-scaffold na na BJDN01000039.1 = NZ_BJDN01000039.1 Primary Assembly 17153 na scaffold40 unplaced-scaffold na na BJDN01000040.1 = NZ_BJDN01000040.1 Primary Assembly 16065 na scaffold41 unplaced-scaffold na na BJDN01000041.1 = NZ_BJDN01000041.1 Primary Assembly 15374 na scaffold42 unplaced-scaffold na na BJDN01000042.1 = NZ_BJDN01000042.1 Primary Assembly 14302 na scaffold43 unplaced-scaffold na na BJDN01000043.1 = NZ_BJDN01000043.1 Primary Assembly 13314 na scaffold44 unplaced-scaffold na na BJDN01000044.1 = NZ_BJDN01000044.1 Primary Assembly 9730 na scaffold45 unplaced-scaffold na na BJDN01000045.1 = NZ_BJDN01000045.1 Primary Assembly 9163 na scaffold46 unplaced-scaffold na na BJDN01000046.1 = NZ_BJDN01000046.1 Primary Assembly 9110 na scaffold47 unplaced-scaffold na na BJDN01000047.1 = NZ_BJDN01000047.1 Primary Assembly 8193 na scaffold48 unplaced-scaffold na na BJDN01000048.1 = NZ_BJDN01000048.1 Primary Assembly 8063 na scaffold49 unplaced-scaffold na na BJDN01000049.1 = NZ_BJDN01000049.1 Primary Assembly 7918 na scaffold50 unplaced-scaffold na na BJDN01000050.1 = NZ_BJDN01000050.1 Primary Assembly 7845 na scaffold51 unplaced-scaffold na na BJDN01000051.1 = NZ_BJDN01000051.1 Primary Assembly 5793 na scaffold52 unplaced-scaffold na na BJDN01000052.1 = NZ_BJDN01000052.1 Primary Assembly 5485 na scaffold53 unplaced-scaffold na na BJDN01000053.1 = NZ_BJDN01000053.1 Primary Assembly 4982 na scaffold54 unplaced-scaffold na na BJDN01000054.1 = NZ_BJDN01000054.1 Primary Assembly 4718 na scaffold55 unplaced-scaffold na na BJDN01000055.1 = NZ_BJDN01000055.1 Primary Assembly 4209 na scaffold56 unplaced-scaffold na na BJDN01000056.1 = NZ_BJDN01000056.1 Primary Assembly 3763 na scaffold57 unplaced-scaffold na na BJDN01000057.1 = NZ_BJDN01000057.1 Primary Assembly 3675 na scaffold58 unplaced-scaffold na na BJDN01000058.1 = NZ_BJDN01000058.1 Primary Assembly 3593 na scaffold59 unplaced-scaffold na na BJDN01000059.1 = NZ_BJDN01000059.1 Primary Assembly 3416 na scaffold60 unplaced-scaffold na na BJDN01000060.1 = NZ_BJDN01000060.1 Primary Assembly 2796 na scaffold61 unplaced-scaffold na na BJDN01000061.1 = NZ_BJDN01000061.1 Primary Assembly 2550 na scaffold62 unplaced-scaffold na na BJDN01000062.1 = NZ_BJDN01000062.1 Primary Assembly 2312 na scaffold63 unplaced-scaffold na na BJDN01000063.1 = NZ_BJDN01000063.1 Primary Assembly 2275 na scaffold64 unplaced-scaffold na na BJDN01000064.1 = NZ_BJDN01000064.1 Primary Assembly 2149 na scaffold65 unplaced-scaffold na na BJDN01000065.1 = NZ_BJDN01000065.1 Primary Assembly 2093 na scaffold66 unplaced-scaffold na na BJDN01000066.1 = NZ_BJDN01000066.1 Primary Assembly 2075 na scaffold67 unplaced-scaffold na na BJDN01000067.1 = NZ_BJDN01000067.1 Primary Assembly 1663 na scaffold68 unplaced-scaffold na na BJDN01000068.1 = NZ_BJDN01000068.1 Primary Assembly 1470 na scaffold69 unplaced-scaffold na na BJDN01000069.1 = NZ_BJDN01000069.1 Primary Assembly 1467 na scaffold70 unplaced-scaffold na na BJDN01000070.1 = NZ_BJDN01000070.1 Primary Assembly 1467 na scaffold71 unplaced-scaffold na na BJDN01000071.1 = NZ_BJDN01000071.1 Primary Assembly 1385 na scaffold72 unplaced-scaffold na na BJDN01000072.1 = NZ_BJDN01000072.1 Primary Assembly 1384 na scaffold73 unplaced-scaffold na na BJDN01000073.1 = NZ_BJDN01000073.1 Primary Assembly 1351 na scaffold74 unplaced-scaffold na na BJDN01000074.1 = NZ_BJDN01000074.1 Primary Assembly 1323 na scaffold75 unplaced-scaffold na na BJDN01000075.1 = NZ_BJDN01000075.1 Primary Assembly 1267 na scaffold76 unplaced-scaffold na na BJDN01000076.1 = NZ_BJDN01000076.1 Primary Assembly 1184 na scaffold77 unplaced-scaffold na na BJDN01000077.1 = NZ_BJDN01000077.1 Primary Assembly 1011 na scaffold78 unplaced-scaffold na na BJDN01000078.1 = NZ_BJDN01000078.1 Primary Assembly 984 na scaffold79 unplaced-scaffold na na BJDN01000079.1 = NZ_BJDN01000079.1 Primary Assembly 928 na scaffold80 unplaced-scaffold na na BJDN01000080.1 = NZ_BJDN01000080.1 Primary Assembly 586 na scaffold81 unplaced-scaffold na na BJDN01000081.1 = NZ_BJDN01000081.1 Primary Assembly 583 na scaffold82 unplaced-scaffold na na BJDN01000082.1 = NZ_BJDN01000082.1 Primary Assembly 581 na scaffold83 unplaced-scaffold na na BJDN01000083.1 = NZ_BJDN01000083.1 Primary Assembly 580 na scaffold84 unplaced-scaffold na na BJDN01000084.1 = NZ_BJDN01000084.1 Primary Assembly 575 na scaffold85 unplaced-scaffold na na BJDN01000085.1 = NZ_BJDN01000085.1 Primary Assembly 536 na scaffold86 unplaced-scaffold na na BJDN01000086.1 = NZ_BJDN01000086.1 Primary Assembly 476 na scaffold87 unplaced-scaffold na na BJDN01000087.1 = NZ_BJDN01000087.1 Primary Assembly 420 na scaffold88 unplaced-scaffold na na BJDN01000088.1 = NZ_BJDN01000088.1 Primary Assembly 413 na scaffold89 unplaced-scaffold na na BJDN01000089.1 = NZ_BJDN01000089.1 Primary Assembly 403 na scaffold90 unplaced-scaffold na na BJDN01000090.1 = NZ_BJDN01000090.1 Primary Assembly 395 na scaffold91 unplaced-scaffold na na BJDN01000091.1 = NZ_BJDN01000091.1 Primary Assembly 376 na scaffold92 unplaced-scaffold na na BJDN01000092.1 = NZ_BJDN01000092.1 Primary Assembly 347 na scaffold93 unplaced-scaffold na na BJDN01000093.1 = NZ_BJDN01000093.1 Primary Assembly 292 na scaffold94 unplaced-scaffold na na BJDN01000094.1 = NZ_BJDN01000094.1 Primary Assembly 283 na scaffold95 unplaced-scaffold na na BJDN01000095.1 = NZ_BJDN01000095.1 Primary Assembly 272 na scaffold96 unplaced-scaffold na na BJDN01000096.1 = NZ_BJDN01000096.1 Primary Assembly 243 na scaffold97 unplaced-scaffold na na BJDN01000097.1 = NZ_BJDN01000097.1 Primary Assembly 237 na scaffold98 unplaced-scaffold na na BJDN01000098.1 = NZ_BJDN01000098.1 Primary Assembly 230 na scaffold99 unplaced-scaffold na na BJDN01000099.1 = NZ_BJDN01000099.1 Primary Assembly 226 na