# Assembly name: ASM540622v1 # Organism name: Campylobacter taeniopygiae (e-proteobacteria) # Infraspecific name: strain=MIT10-5678 # Taxid: 2510188 # BioSample: SAMN07710583 # BioProject: PRJNA412376 # Submitter: MIT # Date: 2019-05-15 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: NXLY01 # Assembly method: SPAdes v. 3.10.0 # Expected final version: no # Genome coverage: 232.78x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_005406225.1 # RefSeq assembly accession: GCF_005406225.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_005406275.1 GCF_005406275.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name accn_194.2647.con.0001 unplaced-scaffold na na NXLY01000001.1 = NZ_NXLY01000001.1 Primary Assembly 190204 na accn_194.2647.con.0002 unplaced-scaffold na na NXLY01000002.1 = NZ_NXLY01000002.1 Primary Assembly 153391 na accn_194.2647.con.0003 unplaced-scaffold na na NXLY01000003.1 = NZ_NXLY01000003.1 Primary Assembly 141247 na accn_194.2647.con.0004 unplaced-scaffold na na NXLY01000004.1 = NZ_NXLY01000004.1 Primary Assembly 137101 na accn_194.2647.con.0005 unplaced-scaffold na na NXLY01000005.1 = NZ_NXLY01000005.1 Primary Assembly 122525 na accn_194.2647.con.0006 unplaced-scaffold na na NXLY01000006.1 = NZ_NXLY01000006.1 Primary Assembly 102484 na accn_194.2647.con.0007 unplaced-scaffold na na NXLY01000007.1 = NZ_NXLY01000007.1 Primary Assembly 99681 na accn_194.2647.con.0008 unplaced-scaffold na na NXLY01000008.1 = NZ_NXLY01000008.1 Primary Assembly 94907 na accn_194.2647.con.0009 unplaced-scaffold na na NXLY01000009.1 = NZ_NXLY01000009.1 Primary Assembly 81006 na accn_194.2647.con.0010 unplaced-scaffold na na NXLY01000010.1 = NZ_NXLY01000010.1 Primary Assembly 79329 na accn_194.2647.con.0011 unplaced-scaffold na na NXLY01000011.1 = NZ_NXLY01000011.1 Primary Assembly 75702 na accn_194.2647.con.0012 unplaced-scaffold na na NXLY01000012.1 = NZ_NXLY01000012.1 Primary Assembly 51521 na accn_194.2647.con.0013 unplaced-scaffold na na NXLY01000013.1 = NZ_NXLY01000013.1 Primary Assembly 47227 na accn_194.2647.con.0014 unplaced-scaffold na na NXLY01000014.1 = NZ_NXLY01000014.1 Primary Assembly 42417 na accn_194.2647.con.0015 unplaced-scaffold na na NXLY01000015.1 = NZ_NXLY01000015.1 Primary Assembly 38348 na accn_194.2647.con.0016 unplaced-scaffold na na NXLY01000016.1 = NZ_NXLY01000016.1 Primary Assembly 38100 na accn_194.2647.con.0017 unplaced-scaffold na na NXLY01000017.1 = NZ_NXLY01000017.1 Primary Assembly 34235 na accn_194.2647.con.0018 unplaced-scaffold na na NXLY01000018.1 = NZ_NXLY01000018.1 Primary Assembly 26509 na accn_194.2647.con.0019 unplaced-scaffold na na NXLY01000019.1 = NZ_NXLY01000019.1 Primary Assembly 15201 na accn_194.2647.con.0020 unplaced-scaffold na na NXLY01000020.1 = NZ_NXLY01000020.1 Primary Assembly 14732 na accn_194.2647.con.0021 unplaced-scaffold na na NXLY01000021.1 = NZ_NXLY01000021.1 Primary Assembly 12165 na accn_194.2647.con.0022 unplaced-scaffold na na NXLY01000022.1 = NZ_NXLY01000022.1 Primary Assembly 10533 na accn_194.2647.con.0023 unplaced-scaffold na na NXLY01000023.1 = NZ_NXLY01000023.1 Primary Assembly 10351 na accn_194.2647.con.0024 unplaced-scaffold na na NXLY01000024.1 = NZ_NXLY01000024.1 Primary Assembly 6200 na accn_194.2647.con.0025 unplaced-scaffold na na NXLY01000025.1 = NZ_NXLY01000025.1 Primary Assembly 5774 na accn_194.2647.con.0026 unplaced-scaffold na na NXLY01000026.1 = NZ_NXLY01000026.1 Primary Assembly 5642 na accn_194.2647.con.0027 unplaced-scaffold na na NXLY01000027.1 = NZ_NXLY01000027.1 Primary Assembly 4987 na accn_194.2647.con.0028 unplaced-scaffold na na NXLY01000028.1 = NZ_NXLY01000028.1 Primary Assembly 4817 na accn_194.2647.con.0029 unplaced-scaffold na na NXLY01000029.1 = NZ_NXLY01000029.1 Primary Assembly 4757 na accn_194.2647.con.0030 unplaced-scaffold na na NXLY01000030.1 = NZ_NXLY01000030.1 Primary Assembly 4712 na accn_194.2647.con.0031 unplaced-scaffold na na NXLY01000031.1 = NZ_NXLY01000031.1 Primary Assembly 4468 na accn_194.2647.con.0032 unplaced-scaffold na na NXLY01000032.1 = NZ_NXLY01000032.1 Primary Assembly 4068 na accn_194.2647.con.0033 unplaced-scaffold na na NXLY01000033.1 = NZ_NXLY01000033.1 Primary Assembly 3931 na accn_194.2647.con.0034 unplaced-scaffold na na NXLY01000034.1 = NZ_NXLY01000034.1 Primary Assembly 3607 na accn_194.2647.con.0035 unplaced-scaffold na na NXLY01000035.1 = NZ_NXLY01000035.1 Primary Assembly 3487 na accn_194.2647.con.0036 unplaced-scaffold na na NXLY01000036.1 = NZ_NXLY01000036.1 Primary Assembly 3476 na accn_194.2647.con.0037 unplaced-scaffold na na NXLY01000037.1 = NZ_NXLY01000037.1 Primary Assembly 3296 na accn_194.2647.con.0038 unplaced-scaffold na na NXLY01000038.1 = NZ_NXLY01000038.1 Primary Assembly 2369 na accn_194.2647.con.0039 unplaced-scaffold na na NXLY01000039.1 = NZ_NXLY01000039.1 Primary Assembly 2233 na accn_194.2647.con.0040 unplaced-scaffold na na NXLY01000040.1 = NZ_NXLY01000040.1 Primary Assembly 2142 na accn_194.2647.con.0041 unplaced-scaffold na na NXLY01000041.1 = NZ_NXLY01000041.1 Primary Assembly 1857 na accn_194.2647.con.0042 unplaced-scaffold na na NXLY01000042.1 = NZ_NXLY01000042.1 Primary Assembly 1797 na accn_194.2647.con.0043 unplaced-scaffold na na NXLY01000043.1 = NZ_NXLY01000043.1 Primary Assembly 1697 na accn_194.2647.con.0044 unplaced-scaffold na na NXLY01000044.1 = NZ_NXLY01000044.1 Primary Assembly 1516 na accn_194.2647.con.0045 unplaced-scaffold na na NXLY01000045.1 = NZ_NXLY01000045.1 Primary Assembly 1436 na accn_194.2647.con.0046 unplaced-scaffold na na NXLY01000046.1 = NZ_NXLY01000046.1 Primary Assembly 1384 na accn_194.2647.con.0047 unplaced-scaffold na na NXLY01000047.1 = NZ_NXLY01000047.1 Primary Assembly 1357 na accn_194.2647.con.0048 unplaced-scaffold na na NXLY01000048.1 = NZ_NXLY01000048.1 Primary Assembly 1301 na accn_194.2647.con.0049 unplaced-scaffold na na NXLY01000049.1 = NZ_NXLY01000049.1 Primary Assembly 1255 na accn_194.2647.con.0050 unplaced-scaffold na na NXLY01000050.1 = NZ_NXLY01000050.1 Primary Assembly 1233 na accn_194.2647.con.0051 unplaced-scaffold na na NXLY01000051.1 = NZ_NXLY01000051.1 Primary Assembly 1129 na accn_194.2647.con.0052 unplaced-scaffold na na NXLY01000052.1 = NZ_NXLY01000052.1 Primary Assembly 1094 na accn_194.2647.con.0053 unplaced-scaffold na na NXLY01000053.1 = NZ_NXLY01000053.1 Primary Assembly 1087 na accn_194.2647.con.0054 unplaced-scaffold na na NXLY01000054.1 = NZ_NXLY01000054.1 Primary Assembly 991 na accn_194.2647.con.0055 unplaced-scaffold na na NXLY01000055.1 = NZ_NXLY01000055.1 Primary Assembly 945 na accn_194.2647.con.0056 unplaced-scaffold na na NXLY01000056.1 = NZ_NXLY01000056.1 Primary Assembly 925 na accn_194.2647.con.0057 unplaced-scaffold na na NXLY01000057.1 = NZ_NXLY01000057.1 Primary Assembly 756 na accn_194.2647.con.0058 unplaced-scaffold na na NXLY01000058.1 = NZ_NXLY01000058.1 Primary Assembly 752 na accn_194.2647.con.0059 unplaced-scaffold na na NXLY01000059.1 = NZ_NXLY01000059.1 Primary Assembly 703 na accn_194.2647.con.0060 unplaced-scaffold na na NXLY01000060.1 = NZ_NXLY01000060.1 Primary Assembly 643 na accn_194.2647.con.0061 unplaced-scaffold na na NXLY01000061.1 = NZ_NXLY01000061.1 Primary Assembly 641 na accn_194.2647.con.0062 unplaced-scaffold na na NXLY01000062.1 = NZ_NXLY01000062.1 Primary Assembly 616 na accn_194.2647.con.0063 unplaced-scaffold na na NXLY01000063.1 = NZ_NXLY01000063.1 Primary Assembly 568 na accn_194.2647.con.0064 unplaced-scaffold na na NXLY01000064.1 = NZ_NXLY01000064.1 Primary Assembly 568 na accn_194.2647.con.0065 unplaced-scaffold na na NXLY01000065.1 = NZ_NXLY01000065.1 Primary Assembly 546 na accn_194.2647.con.0066 unplaced-scaffold na na NXLY01000066.1 = NZ_NXLY01000066.1 Primary Assembly 530 na accn_194.2647.con.0067 unplaced-scaffold na na NXLY01000067.1 = NZ_NXLY01000067.1 Primary Assembly 522 na accn_194.2647.con.0068 unplaced-scaffold na na NXLY01000068.1 = NZ_NXLY01000068.1 Primary Assembly 503 na accn_194.2647.con.0069 unplaced-scaffold na na NXLY01000069.1 = NZ_NXLY01000069.1 Primary Assembly 498 na accn_194.2647.con.0070 unplaced-scaffold na na NXLY01000070.1 = NZ_NXLY01000070.1 Primary Assembly 493 na accn_194.2647.con.0071 unplaced-scaffold na na NXLY01000071.1 = NZ_NXLY01000071.1 Primary Assembly 488 na accn_194.2647.con.0072 unplaced-scaffold na na NXLY01000072.1 = NZ_NXLY01000072.1 Primary Assembly 473 na accn_194.2647.con.0073 unplaced-scaffold na na NXLY01000073.1 = NZ_NXLY01000073.1 Primary Assembly 444 na accn_194.2647.con.0074 unplaced-scaffold na na NXLY01000074.1 = NZ_NXLY01000074.1 Primary Assembly 435 na accn_194.2647.con.0075 unplaced-scaffold na na NXLY01000075.1 = NZ_NXLY01000075.1 Primary Assembly 427 na accn_194.2647.con.0076 unplaced-scaffold na na NXLY01000076.1 = NZ_NXLY01000076.1 Primary Assembly 420 na accn_194.2647.con.0077 unplaced-scaffold na na NXLY01000077.1 = NZ_NXLY01000077.1 Primary Assembly 411 na accn_194.2647.con.0078 unplaced-scaffold na na NXLY01000078.1 = NZ_NXLY01000078.1 Primary Assembly 411 na accn_194.2647.con.0079 unplaced-scaffold na na NXLY01000079.1 = NZ_NXLY01000079.1 Primary Assembly 407 na accn_194.2647.con.0080 unplaced-scaffold na na NXLY01000080.1 = NZ_NXLY01000080.1 Primary Assembly 403 na accn_194.2647.con.0081 unplaced-scaffold na na NXLY01000081.1 = NZ_NXLY01000081.1 Primary Assembly 389 na accn_194.2647.con.0082 unplaced-scaffold na na NXLY01000082.1 = NZ_NXLY01000082.1 Primary Assembly 377 na accn_194.2647.con.0083 unplaced-scaffold na na NXLY01000083.1 = NZ_NXLY01000083.1 Primary Assembly 363 na accn_194.2647.con.0084 unplaced-scaffold na na NXLY01000084.1 = NZ_NXLY01000084.1 Primary Assembly 340 na accn_194.2647.con.0085 unplaced-scaffold na na NXLY01000085.1 = NZ_NXLY01000085.1 Primary Assembly 327 na accn_194.2647.con.0086 unplaced-scaffold na na NXLY01000086.1 = NZ_NXLY01000086.1 Primary Assembly 325 na accn_194.2647.con.0087 unplaced-scaffold na na NXLY01000087.1 = NZ_NXLY01000087.1 Primary Assembly 309 na accn_194.2647.con.0088 unplaced-scaffold na na NXLY01000088.1 = NZ_NXLY01000088.1 Primary Assembly 304 na