# Assembly name: ASM543502v1 # Organism name: Halorubrum sp. CGM4_25_10-8A (euryarchaeotes) # Infraspecific name: strain=CGM4_25_10-8A # Taxid: 2518116 # BioSample: SAMN10910416 # BioProject: PRJNA521777 # Submitter: University of Connecticut # Date: 2019-05-16 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: SGTX01 # Assembly method: SPAdes v. 3.11.1 # Expected final version: yes # Genome coverage: 109x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_005435025.1 # RefSeq assembly accession: GCF_005435025.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_005435065.1 GCF_005435065.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_477981_cov_22.137306 unplaced-scaffold na na SGTX01000001.1 = NZ_SGTX01000001.1 Primary Assembly 477981 na NODE_2_length_351933_cov_26.692981 unplaced-scaffold na na SGTX01000002.1 = NZ_SGTX01000002.1 Primary Assembly 351933 na NODE_3_length_336121_cov_21.982327 unplaced-scaffold na na SGTX01000003.1 = NZ_SGTX01000003.1 Primary Assembly 336121 na NODE_4_length_278136_cov_29.885781 unplaced-scaffold na na SGTX01000004.1 = NZ_SGTX01000004.1 Primary Assembly 278136 na NODE_5_length_197564_cov_25.457397 unplaced-scaffold na na SGTX01000005.1 = NZ_SGTX01000005.1 Primary Assembly 197564 na NODE_6_length_180520_cov_59.969223 unplaced-scaffold na na SGTX01000006.1 = NZ_SGTX01000006.1 Primary Assembly 180520 na NODE_7_length_158003_cov_19.558331 unplaced-scaffold na na SGTX01000007.1 = NZ_SGTX01000007.1 Primary Assembly 158003 na NODE_8_length_153917_cov_21.770408 unplaced-scaffold na na SGTX01000008.1 = NZ_SGTX01000008.1 Primary Assembly 153917 na NODE_9_length_134720_cov_21.689196 unplaced-scaffold na na SGTX01000009.1 = NZ_SGTX01000009.1 Primary Assembly 134720 na NODE_10_length_121566_cov_20.609722 unplaced-scaffold na na SGTX01000010.1 = NZ_SGTX01000010.1 Primary Assembly 121566 na NODE_11_length_118360_cov_21.432147 unplaced-scaffold na na SGTX01000011.1 = NZ_SGTX01000011.1 Primary Assembly 118360 na NODE_12_length_115585_cov_20.756630 unplaced-scaffold na na SGTX01000012.1 = NZ_SGTX01000012.1 Primary Assembly 115585 na NODE_13_length_88462_cov_22.073663 unplaced-scaffold na na SGTX01000013.1 = NZ_SGTX01000013.1 Primary Assembly 88462 na NODE_14_length_78295_cov_67.701361 unplaced-scaffold na na SGTX01000014.1 = NZ_SGTX01000014.1 Primary Assembly 78295 na NODE_15_length_77219_cov_54.119753 unplaced-scaffold na na SGTX01000015.1 = NZ_SGTX01000015.1 Primary Assembly 77219 na NODE_16_length_63977_cov_21.088645 unplaced-scaffold na na SGTX01000016.1 = NZ_SGTX01000016.1 Primary Assembly 63977 na NODE_17_length_60450_cov_61.438506 unplaced-scaffold na na SGTX01000017.1 = NZ_SGTX01000017.1 Primary Assembly 60450 na NODE_18_length_51849_cov_57.862515 unplaced-scaffold na na SGTX01000018.1 = NZ_SGTX01000018.1 Primary Assembly 51849 na NODE_19_length_48833_cov_60.986922 unplaced-scaffold na na SGTX01000019.1 = NZ_SGTX01000019.1 Primary Assembly 48833 na NODE_20_length_45707_cov_20.050483 unplaced-scaffold na na SGTX01000020.1 = NZ_SGTX01000020.1 Primary Assembly 45707 na NODE_21_length_44018_cov_19.617484 unplaced-scaffold na na SGTX01000021.1 = NZ_SGTX01000021.1 Primary Assembly 44018 na NODE_22_length_43901_cov_19.953694 unplaced-scaffold na na SGTX01000022.1 = NZ_SGTX01000022.1 Primary Assembly 43901 na NODE_23_length_42152_cov_69.575634 unplaced-scaffold na na SGTX01000023.1 = NZ_SGTX01000023.1 Primary Assembly 42152 na NODE_24_length_28367_cov_23.138810 unplaced-scaffold na na SGTX01000024.1 = NZ_SGTX01000024.1 Primary Assembly 28367 na NODE_25_length_25381_cov_20.995407 unplaced-scaffold na na SGTX01000025.1 = NZ_SGTX01000025.1 Primary Assembly 25381 na NODE_26_length_25103_cov_21.200272 unplaced-scaffold na na SGTX01000026.1 = NZ_SGTX01000026.1 Primary Assembly 25103 na NODE_27_length_24615_cov_24.141212 unplaced-scaffold na na SGTX01000027.1 = NZ_SGTX01000027.1 Primary Assembly 24615 na NODE_28_length_24525_cov_63.435118 unplaced-scaffold na na SGTX01000028.1 = NZ_SGTX01000028.1 Primary Assembly 24525 na NODE_29_length_24001_cov_26.707883 unplaced-scaffold na na SGTX01000029.1 = NZ_SGTX01000029.1 Primary Assembly 24001 na NODE_30_length_21750_cov_54.793784 unplaced-scaffold na na SGTX01000030.1 = NZ_SGTX01000030.1 Primary Assembly 21750 na NODE_31_length_21564_cov_18.248775 unplaced-scaffold na na SGTX01000031.1 = NZ_SGTX01000031.1 Primary Assembly 21564 na NODE_32_length_20622_cov_20.381996 unplaced-scaffold na na SGTX01000032.1 = NZ_SGTX01000032.1 Primary Assembly 20622 na NODE_33_length_20109_cov_51.886648 unplaced-scaffold na na SGTX01000033.1 = NZ_SGTX01000033.1 Primary Assembly 20109 na NODE_34_length_15626_cov_68.055294 unplaced-scaffold na na SGTX01000034.1 = NZ_SGTX01000034.1 Primary Assembly 15626 na NODE_35_length_15361_cov_24.150716 unplaced-scaffold na na SGTX01000035.1 = NZ_SGTX01000035.1 Primary Assembly 15361 na NODE_36_length_12330_cov_53.188396 unplaced-scaffold na na SGTX01000036.1 = NZ_SGTX01000036.1 Primary Assembly 12330 na NODE_37_length_11069_cov_35.312009 unplaced-scaffold na na SGTX01000037.1 = NZ_SGTX01000037.1 Primary Assembly 11069 na NODE_38_length_8585_cov_46.706432 unplaced-scaffold na na SGTX01000038.1 = NZ_SGTX01000038.1 Primary Assembly 8585 na NODE_39_length_5893_cov_59.642560 unplaced-scaffold na na SGTX01000039.1 = NZ_SGTX01000039.1 Primary Assembly 5893 na NODE_40_length_5373_cov_106.080061 unplaced-scaffold na na SGTX01000040.1 = NZ_SGTX01000040.1 Primary Assembly 5373 na NODE_41_length_3653_cov_17.283324 unplaced-scaffold na na SGTX01000041.1 = NZ_SGTX01000041.1 Primary Assembly 3653 na NODE_42_length_3279_cov_17.685849 unplaced-scaffold na na SGTX01000042.1 = NZ_SGTX01000042.1 Primary Assembly 3279 na NODE_43_length_2601_cov_31.618027 unplaced-scaffold na na SGTX01000043.1 = NZ_SGTX01000043.1 Primary Assembly 2601 na NODE_44_length_2226_cov_28.735112 unplaced-scaffold na na SGTX01000044.1 = NZ_SGTX01000044.1 Primary Assembly 2226 na NODE_45_length_1155_cov_109.570039 unplaced-scaffold na na SGTX01000045.1 = NZ_SGTX01000045.1 Primary Assembly 1155 na NODE_46_length_793_cov_107.219219 unplaced-scaffold na na SGTX01000046.1 = NZ_SGTX01000046.1 Primary Assembly 793 na NODE_47_length_700_cov_107.696335 unplaced-scaffold na na SGTX01000047.1 = NZ_SGTX01000047.1 Primary Assembly 700 na NODE_48_length_620_cov_0.884381 unplaced-scaffold na na SGTX01000048.1 = NZ_SGTX01000048.1 Primary Assembly 620 na NODE_49_length_569_cov_1.386878 unplaced-scaffold na na SGTX01000049.1 = NZ_SGTX01000049.1 Primary Assembly 569 na NODE_50_length_568_cov_1.197279 unplaced-scaffold na na SGTX01000050.1 = NZ_SGTX01000050.1 Primary Assembly 568 na NODE_51_length_568_cov_0.807256 unplaced-scaffold na na SGTX01000051.1 = NZ_SGTX01000051.1 Primary Assembly 506 na NODE_52_length_543_cov_63.355769 unplaced-scaffold na na SGTX01000052.1 = NZ_SGTX01000052.1 Primary Assembly 543 na NODE_54_length_515_cov_0.770619 unplaced-scaffold na na SGTX01000053.1 = NZ_SGTX01000053.1 Primary Assembly 515 na NODE_55_length_508_cov_1.162730 unplaced-scaffold na na SGTX01000054.1 = NZ_SGTX01000054.1 Primary Assembly 508 na NODE_56_length_497_cov_0.791892 unplaced-scaffold na na SGTX01000055.1 = NZ_SGTX01000055.1 Primary Assembly 497 na NODE_58_length_480_cov_0.875354 unplaced-scaffold na na SGTX01000056.1 = NZ_SGTX01000056.1 Primary Assembly 480 na NODE_59_length_469_cov_0.935673 unplaced-scaffold na na SGTX01000057.1 = NZ_SGTX01000057.1 Primary Assembly 469 na NODE_60_length_465_cov_1.887574 unplaced-scaffold na na SGTX01000058.1 = NZ_SGTX01000058.1 Primary Assembly 465 na NODE_61_length_464_cov_0.910979 unplaced-scaffold na na SGTX01000059.1 = NZ_SGTX01000059.1 Primary Assembly 464 na NODE_62_length_462_cov_1.101493 unplaced-scaffold na na SGTX01000060.1 = NZ_SGTX01000060.1 Primary Assembly 462 na NODE_63_length_448_cov_284.227414 unplaced-scaffold na na SGTX01000061.1 = NZ_SGTX01000061.1 Primary Assembly 448 na NODE_64_length_448_cov_0.931464 unplaced-scaffold na na SGTX01000062.1 = NZ_SGTX01000062.1 Primary Assembly 448 na NODE_65_length_448_cov_0.781931 unplaced-scaffold na na SGTX01000063.1 = NZ_SGTX01000063.1 Primary Assembly 448 na NODE_66_length_445_cov_1.053459 unplaced-scaffold na na SGTX01000064.1 = NZ_SGTX01000064.1 Primary Assembly 445 na NODE_67_length_440_cov_1.546326 unplaced-scaffold na na SGTX01000065.1 = NZ_SGTX01000065.1 Primary Assembly 440 na NODE_68_length_434_cov_126.957655 unplaced-scaffold na na SGTX01000066.1 = NZ_SGTX01000066.1 Primary Assembly 434 na NODE_69_length_429_cov_0.701987 unplaced-scaffold na na SGTX01000067.1 = NZ_SGTX01000067.1 Primary Assembly 429 na NODE_70_length_382_cov_52.447059 unplaced-scaffold na na SGTX01000068.1 = NZ_SGTX01000068.1 Primary Assembly 382 na NODE_71_length_253_cov_41.801587 unplaced-scaffold na na SGTX01000069.1 = NZ_SGTX01000069.1 Primary Assembly 253 na NODE_72_length_252_cov_53.736000 unplaced-scaffold na na SGTX01000070.1 = NZ_SGTX01000070.1 Primary Assembly 252 na NODE_73_length_240_cov_112.238938 unplaced-scaffold na na SGTX01000071.1 = NZ_SGTX01000071.1 Primary Assembly 240 na NODE_74_length_240_cov_15.557522 unplaced-scaffold na na SGTX01000072.1 = NZ_SGTX01000072.1 Primary Assembly 240 na NODE_75_length_240_cov_10.504425 unplaced-scaffold na na SGTX01000073.1 = NZ_SGTX01000073.1 Primary Assembly 240 na