# Assembly name: ASM543517v1 # Organism name: Halorubrum sp. GN11GM_10-3_MGM (euryarchaeotes) # Infraspecific name: strain=GN11GM_10-3_MGM # Taxid: 2518111 # BioSample: SAMN10910409 # BioProject: PRJNA521777 # Submitter: University of Connecticut # Date: 2019-05-16 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: SGUD01 # Assembly method: SPAdes v. 3.11.1 # Expected final version: yes # Genome coverage: 96x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_005435175.1 # RefSeq assembly accession: GCF_005435175.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_005435205.1 GCF_005435205.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_218444_cov_19.087946 unplaced-scaffold na na SGUD01000001.1 = NZ_SGUD01000001.1 Primary Assembly 218444 na NODE_2_length_157942_cov_49.962279 unplaced-scaffold na na SGUD01000002.1 = NZ_SGUD01000002.1 Primary Assembly 157942 na NODE_3_length_134752_cov_26.526878 unplaced-scaffold na na SGUD01000003.1 = NZ_SGUD01000003.1 Primary Assembly 134752 na NODE_4_length_110818_cov_23.063691 unplaced-scaffold na na SGUD01000004.1 = NZ_SGUD01000004.1 Primary Assembly 110818 na NODE_5_length_108200_cov_19.198967 unplaced-scaffold na na SGUD01000005.1 = NZ_SGUD01000005.1 Primary Assembly 108200 na NODE_6_length_105840_cov_65.176147 unplaced-scaffold na na SGUD01000006.1 = NZ_SGUD01000006.1 Primary Assembly 105840 na NODE_7_length_93878_cov_19.625967 unplaced-scaffold na na SGUD01000007.1 = NZ_SGUD01000007.1 Primary Assembly 93878 na NODE_8_length_93087_cov_35.343201 unplaced-scaffold na na SGUD01000008.1 = NZ_SGUD01000008.1 Primary Assembly 93087 na NODE_9_length_85246_cov_21.727816 unplaced-scaffold na na SGUD01000009.1 = NZ_SGUD01000009.1 Primary Assembly 85246 na NODE_10_length_83177_cov_19.995340 unplaced-scaffold na na SGUD01000010.1 = NZ_SGUD01000010.1 Primary Assembly 83177 na NODE_11_length_77349_cov_26.847673 unplaced-scaffold na na SGUD01000011.1 = NZ_SGUD01000011.1 Primary Assembly 77349 na NODE_12_length_75499_cov_31.700711 unplaced-scaffold na na SGUD01000012.1 = NZ_SGUD01000012.1 Primary Assembly 75499 na NODE_13_length_73154_cov_20.486560 unplaced-scaffold na na SGUD01000013.1 = NZ_SGUD01000013.1 Primary Assembly 73154 na NODE_14_length_70406_cov_22.380085 unplaced-scaffold na na SGUD01000014.1 = NZ_SGUD01000014.1 Primary Assembly 70406 na NODE_15_length_67132_cov_18.794971 unplaced-scaffold na na SGUD01000015.1 = NZ_SGUD01000015.1 Primary Assembly 67132 na NODE_16_length_66738_cov_20.069118 unplaced-scaffold na na SGUD01000016.1 = NZ_SGUD01000016.1 Primary Assembly 66738 na NODE_17_length_60534_cov_25.318092 unplaced-scaffold na na SGUD01000017.1 = NZ_SGUD01000017.1 Primary Assembly 60534 na NODE_18_length_59936_cov_23.930897 unplaced-scaffold na na SGUD01000018.1 = NZ_SGUD01000018.1 Primary Assembly 59936 na NODE_19_length_58922_cov_19.629254 unplaced-scaffold na na SGUD01000019.1 = NZ_SGUD01000019.1 Primary Assembly 58922 na NODE_20_length_58222_cov_19.768552 unplaced-scaffold na na SGUD01000020.1 = NZ_SGUD01000020.1 Primary Assembly 58222 na NODE_21_length_56870_cov_23.775250 unplaced-scaffold na na SGUD01000021.1 = NZ_SGUD01000021.1 Primary Assembly 56870 na NODE_22_length_56633_cov_23.312586 unplaced-scaffold na na SGUD01000022.1 = NZ_SGUD01000022.1 Primary Assembly 56633 na NODE_23_length_50371_cov_22.465329 unplaced-scaffold na na SGUD01000023.1 = NZ_SGUD01000023.1 Primary Assembly 50371 na NODE_24_length_50237_cov_23.329116 unplaced-scaffold na na SGUD01000024.1 = NZ_SGUD01000024.1 Primary Assembly 50237 na NODE_25_length_44387_cov_22.198983 unplaced-scaffold na na SGUD01000025.1 = NZ_SGUD01000025.1 Primary Assembly 44387 na NODE_26_length_43980_cov_22.146512 unplaced-scaffold na na SGUD01000026.1 = NZ_SGUD01000026.1 Primary Assembly 43980 na NODE_27_length_42536_cov_18.208093 unplaced-scaffold na na SGUD01000027.1 = NZ_SGUD01000027.1 Primary Assembly 42536 na NODE_28_length_42407_cov_57.641651 unplaced-scaffold na na SGUD01000028.1 = NZ_SGUD01000028.1 Primary Assembly 42407 na NODE_29_length_42249_cov_19.709344 unplaced-scaffold na na SGUD01000029.1 = NZ_SGUD01000029.1 Primary Assembly 42249 na NODE_30_length_41749_cov_21.357864 unplaced-scaffold na na SGUD01000030.1 = NZ_SGUD01000030.1 Primary Assembly 41749 na NODE_31_length_41214_cov_24.459099 unplaced-scaffold na na SGUD01000031.1 = NZ_SGUD01000031.1 Primary Assembly 41214 na NODE_32_length_41125_cov_20.443875 unplaced-scaffold na na SGUD01000032.1 = NZ_SGUD01000032.1 Primary Assembly 41125 na NODE_33_length_41090_cov_21.686620 unplaced-scaffold na na SGUD01000033.1 = NZ_SGUD01000033.1 Primary Assembly 41090 na NODE_34_length_39801_cov_25.719867 unplaced-scaffold na na SGUD01000034.1 = NZ_SGUD01000034.1 Primary Assembly 39801 na NODE_35_length_38252_cov_18.144184 unplaced-scaffold na na SGUD01000035.1 = NZ_SGUD01000035.1 Primary Assembly 38252 na NODE_36_length_36868_cov_18.651670 unplaced-scaffold na na SGUD01000036.1 = NZ_SGUD01000036.1 Primary Assembly 36868 na NODE_37_length_36215_cov_37.438539 unplaced-scaffold na na SGUD01000037.1 = NZ_SGUD01000037.1 Primary Assembly 36215 na NODE_38_length_35565_cov_17.835374 unplaced-scaffold na na SGUD01000038.1 = NZ_SGUD01000038.1 Primary Assembly 35565 na NODE_39_length_34108_cov_18.860010 unplaced-scaffold na na SGUD01000039.1 = NZ_SGUD01000039.1 Primary Assembly 34108 na NODE_40_length_33841_cov_19.965356 unplaced-scaffold na na SGUD01000040.1 = NZ_SGUD01000040.1 Primary Assembly 33841 na NODE_41_length_33451_cov_18.716901 unplaced-scaffold na na SGUD01000041.1 = NZ_SGUD01000041.1 Primary Assembly 33451 na NODE_42_length_31922_cov_23.980406 unplaced-scaffold na na SGUD01000042.1 = NZ_SGUD01000042.1 Primary Assembly 31922 na NODE_43_length_30854_cov_22.100954 unplaced-scaffold na na SGUD01000043.1 = NZ_SGUD01000043.1 Primary Assembly 30854 na NODE_44_length_30189_cov_22.562604 unplaced-scaffold na na SGUD01000044.1 = NZ_SGUD01000044.1 Primary Assembly 30189 na NODE_45_length_29949_cov_21.897123 unplaced-scaffold na na SGUD01000045.1 = NZ_SGUD01000045.1 Primary Assembly 29949 na NODE_46_length_29540_cov_20.900180 unplaced-scaffold na na SGUD01000046.1 = NZ_SGUD01000046.1 Primary Assembly 29540 na NODE_47_length_28999_cov_38.031311 unplaced-scaffold na na SGUD01000047.1 = NZ_SGUD01000047.1 Primary Assembly 28999 na NODE_48_length_25652_cov_22.161881 unplaced-scaffold na na SGUD01000048.1 = NZ_SGUD01000048.1 Primary Assembly 25652 na NODE_49_length_23639_cov_20.644012 unplaced-scaffold na na SGUD01000049.1 = NZ_SGUD01000049.1 Primary Assembly 23639 na NODE_50_length_22599_cov_18.364988 unplaced-scaffold na na SGUD01000050.1 = NZ_SGUD01000050.1 Primary Assembly 22599 na NODE_51_length_22231_cov_17.919155 unplaced-scaffold na na SGUD01000051.1 = NZ_SGUD01000051.1 Primary Assembly 22231 na NODE_52_length_20412_cov_19.741878 unplaced-scaffold na na SGUD01000052.1 = NZ_SGUD01000052.1 Primary Assembly 20412 na NODE_53_length_18925_cov_20.223215 unplaced-scaffold na na SGUD01000053.1 = NZ_SGUD01000053.1 Primary Assembly 18925 na NODE_54_length_18691_cov_26.536522 unplaced-scaffold na na SGUD01000054.1 = NZ_SGUD01000054.1 Primary Assembly 18691 na NODE_55_length_18298_cov_18.089098 unplaced-scaffold na na SGUD01000055.1 = NZ_SGUD01000055.1 Primary Assembly 18298 na NODE_56_length_17089_cov_21.612015 unplaced-scaffold na na SGUD01000056.1 = NZ_SGUD01000056.1 Primary Assembly 17089 na NODE_57_length_16309_cov_28.499506 unplaced-scaffold na na SGUD01000057.1 = NZ_SGUD01000057.1 Primary Assembly 16309 na NODE_58_length_15785_cov_18.084749 unplaced-scaffold na na SGUD01000058.1 = NZ_SGUD01000058.1 Primary Assembly 15785 na NODE_59_length_15726_cov_112.631387 unplaced-scaffold na na SGUD01000059.1 = NZ_SGUD01000059.1 Primary Assembly 15726 na NODE_60_length_15639_cov_31.670964 unplaced-scaffold na na SGUD01000060.1 = NZ_SGUD01000060.1 Primary Assembly 15639 na NODE_61_length_15576_cov_15.256392 unplaced-scaffold na na SGUD01000061.1 = NZ_SGUD01000061.1 Primary Assembly 15576 na NODE_62_length_13582_cov_46.111631 unplaced-scaffold na na SGUD01000062.1 = NZ_SGUD01000062.1 Primary Assembly 13582 na NODE_63_length_13435_cov_18.966035 unplaced-scaffold na na SGUD01000063.1 = NZ_SGUD01000063.1 Primary Assembly 13435 na NODE_64_length_13219_cov_30.380843 unplaced-scaffold na na SGUD01000064.1 = NZ_SGUD01000064.1 Primary Assembly 13219 na NODE_65_length_13193_cov_21.442140 unplaced-scaffold na na SGUD01000065.1 = NZ_SGUD01000065.1 Primary Assembly 13193 na NODE_66_length_12894_cov_22.531370 unplaced-scaffold na na SGUD01000066.1 = NZ_SGUD01000066.1 Primary Assembly 12894 na NODE_67_length_12882_cov_21.193336 unplaced-scaffold na na SGUD01000067.1 = NZ_SGUD01000067.1 Primary Assembly 12882 na NODE_68_length_10907_cov_27.800186 unplaced-scaffold na na SGUD01000068.1 = NZ_SGUD01000068.1 Primary Assembly 10907 na NODE_69_length_10524_cov_18.426181 unplaced-scaffold na na SGUD01000069.1 = NZ_SGUD01000069.1 Primary Assembly 10524 na NODE_70_length_10117_cov_20.633934 unplaced-scaffold na na SGUD01000070.1 = NZ_SGUD01000070.1 Primary Assembly 10117 na NODE_71_length_10026_cov_19.194060 unplaced-scaffold na na SGUD01000071.1 = NZ_SGUD01000071.1 Primary Assembly 10026 na NODE_72_length_9633_cov_21.683779 unplaced-scaffold na na SGUD01000072.1 = NZ_SGUD01000072.1 Primary Assembly 9633 na NODE_73_length_9529_cov_19.257711 unplaced-scaffold na na SGUD01000073.1 = NZ_SGUD01000073.1 Primary Assembly 9529 na NODE_74_length_9105_cov_27.276676 unplaced-scaffold na na SGUD01000074.1 = NZ_SGUD01000074.1 Primary Assembly 9105 na NODE_75_length_8974_cov_15.290155 unplaced-scaffold na na SGUD01000075.1 = NZ_SGUD01000075.1 Primary Assembly 8974 na NODE_76_length_8733_cov_12.964443 unplaced-scaffold na na SGUD01000076.1 = NZ_SGUD01000076.1 Primary Assembly 8733 na NODE_77_length_8622_cov_16.690642 unplaced-scaffold na na SGUD01000077.1 = NZ_SGUD01000077.1 Primary Assembly 8622 na NODE_78_length_8216_cov_17.232909 unplaced-scaffold na na SGUD01000078.1 = NZ_SGUD01000078.1 Primary Assembly 8216 na NODE_79_length_7792_cov_17.716373 unplaced-scaffold na na SGUD01000079.1 = NZ_SGUD01000079.1 Primary Assembly 7792 na NODE_80_length_6976_cov_18.005840 unplaced-scaffold na na SGUD01000080.1 = NZ_SGUD01000080.1 Primary Assembly 6976 na NODE_81_length_6955_cov_15.623755 unplaced-scaffold na na SGUD01000081.1 = NZ_SGUD01000081.1 Primary Assembly 6955 na NODE_82_length_6519_cov_36.824937 unplaced-scaffold na na SGUD01000082.1 = NZ_SGUD01000082.1 Primary Assembly 6519 na NODE_83_length_6415_cov_20.347487 unplaced-scaffold na na SGUD01000083.1 = NZ_SGUD01000083.1 Primary Assembly 6415 na NODE_84_length_5804_cov_16.057249 unplaced-scaffold na na SGUD01000084.1 = NZ_SGUD01000084.1 Primary Assembly 5804 na NODE_85_length_5763_cov_16.153655 unplaced-scaffold na na SGUD01000085.1 = NZ_SGUD01000085.1 Primary Assembly 5763 na NODE_86_length_5560_cov_22.977729 unplaced-scaffold na na SGUD01000086.1 = NZ_SGUD01000086.1 Primary Assembly 5560 na NODE_87_length_5327_cov_21.896923 unplaced-scaffold na na SGUD01000087.1 = NZ_SGUD01000087.1 Primary Assembly 5327 na NODE_88_length_5085_cov_21.271884 unplaced-scaffold na na SGUD01000088.1 = NZ_SGUD01000088.1 Primary Assembly 5085 na NODE_89_length_5064_cov_21.018837 unplaced-scaffold na na SGUD01000089.1 = NZ_SGUD01000089.1 Primary Assembly 5064 na NODE_90_length_4658_cov_13.670713 unplaced-scaffold na na SGUD01000090.1 = NZ_SGUD01000090.1 Primary Assembly 4658 na NODE_91_length_4551_cov_17.061935 unplaced-scaffold na na SGUD01000091.1 = NZ_SGUD01000091.1 Primary Assembly 4551 na NODE_92_length_4193_cov_504.707575 unplaced-scaffold na na SGUD01000092.1 = NZ_SGUD01000092.1 Primary Assembly 4193 na NODE_93_length_3380_cov_25.887796 unplaced-scaffold na na SGUD01000093.1 = NZ_SGUD01000093.1 Primary Assembly 3380 na NODE_94_length_2789_cov_16.399324 unplaced-scaffold na na SGUD01000094.1 = NZ_SGUD01000094.1 Primary Assembly 2789 na NODE_95_length_2598_cov_29.975314 unplaced-scaffold na na SGUD01000095.1 = NZ_SGUD01000095.1 Primary Assembly 2598 na NODE_96_length_2512_cov_166.579036 unplaced-scaffold na na SGUD01000096.1 = NZ_SGUD01000096.1 Primary Assembly 2512 na NODE_97_length_2342_cov_25.209029 unplaced-scaffold na na SGUD01000097.1 = NZ_SGUD01000097.1 Primary Assembly 2342 na NODE_98_length_1553_cov_70.776999 unplaced-scaffold na na SGUD01000098.1 = NZ_SGUD01000098.1 Primary Assembly 1553 na NODE_99_length_1442_cov_70.976426 unplaced-scaffold na na SGUD01000099.1 = NZ_SGUD01000099.1 Primary Assembly 1442 na NODE_100_length_1154_cov_405.381694 unplaced-scaffold na na SGUD01000100.1 = NZ_SGUD01000100.1 Primary Assembly 1154 na NODE_101_length_940_cov_65.404674 unplaced-scaffold na na SGUD01000101.1 = NZ_SGUD01000101.1 Primary Assembly 940 na NODE_102_length_761_cov_43.552050 unplaced-scaffold na na SGUD01000102.1 = NZ_SGUD01000102.1 Primary Assembly 761 na NODE_103_length_747_cov_91.445161 unplaced-scaffold na na SGUD01000103.1 = NZ_SGUD01000103.1 Primary Assembly 747 na NODE_104_length_691_cov_77.882979 unplaced-scaffold na na SGUD01000104.1 = NZ_SGUD01000104.1 Primary Assembly 691 na NODE_105_length_636_cov_3.286837 unplaced-scaffold na na SGUD01000105.1 = NZ_SGUD01000105.1 Primary Assembly 636 na NODE_106_length_511_cov_1.656250 unplaced-scaffold na na SGUD01000106.1 = NZ_SGUD01000106.1 Primary Assembly 511 na NODE_107_length_483_cov_1.216292 unplaced-scaffold na na SGUD01000107.1 = NZ_SGUD01000107.1 Primary Assembly 483 na NODE_108_length_443_cov_1.072785 unplaced-scaffold na na SGUD01000108.1 = NZ_SGUD01000108.1 Primary Assembly 443 na NODE_109_length_443_cov_1.022152 unplaced-scaffold na na SGUD01000109.1 = NZ_SGUD01000109.1 Primary Assembly 443 na NODE_110_length_439_cov_41.974359 unplaced-scaffold na na SGUD01000110.1 = NZ_SGUD01000110.1 Primary Assembly 439 na NODE_111_length_437_cov_1.683871 unplaced-scaffold na na SGUD01000111.1 = NZ_SGUD01000111.1 Primary Assembly 437 na NODE_112_length_251_cov_65.475806 unplaced-scaffold na na SGUD01000112.1 = NZ_SGUD01000112.1 Primary Assembly 251 na NODE_113_length_248_cov_55.628099 unplaced-scaffold na na SGUD01000113.1 = NZ_SGUD01000113.1 Primary Assembly 248 na