# Assembly name: ASM617598v1 # Organism name: Methylotetracoccus oryzae (g-proteobacteria) # Infraspecific name: strain=C50C1 # Taxid: 1919059 # BioSample: SAMN06019997 # BioProject: PRJNA361434 # Submitter: Radboud University # Date: 2019-06-10 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: SRSH01 # Assembly method: SPAdes v. MAY-2018 # Expected final version: yes # Genome coverage: 20.0x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_006175985.1 # RefSeq assembly accession: GCF_006175985.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_006176005.1 GCF_006176005.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_592852_cov_260.381056 unplaced-scaffold na na SRSH01000001.1 = NZ_SRSH01000001.1 Primary Assembly 592852 na NODE_2_length_292154_cov_244.014786 unplaced-scaffold na na SRSH01000002.1 = NZ_SRSH01000002.1 Primary Assembly 292154 na NODE_3_length_278351_cov_260.878923 unplaced-scaffold na na SRSH01000003.1 = NZ_SRSH01000003.1 Primary Assembly 278351 na NODE_4_length_277318_cov_273.788095 unplaced-scaffold na na SRSH01000004.1 = NZ_SRSH01000004.1 Primary Assembly 277318 na NODE_5_length_235968_cov_247.648171 unplaced-scaffold na na SRSH01000005.1 = NZ_SRSH01000005.1 Primary Assembly 235968 na NODE_6_length_234879_cov_266.654859 unplaced-scaffold na na SRSH01000006.1 = NZ_SRSH01000006.1 Primary Assembly 234879 na NODE_7_length_223077_cov_244.792379 unplaced-scaffold na na SRSH01000007.1 = NZ_SRSH01000007.1 Primary Assembly 223077 na NODE_8_length_214892_cov_244.690789 unplaced-scaffold na na SRSH01000008.1 = NZ_SRSH01000008.1 Primary Assembly 214892 na NODE_9_length_199476_cov_264.463213 unplaced-scaffold na na SRSH01000009.1 = NZ_SRSH01000009.1 Primary Assembly 199476 na NODE_10_length_183872_cov_297.782279 unplaced-scaffold na na SRSH01000010.1 = NZ_SRSH01000010.1 Primary Assembly 183872 na NODE_11_length_178791_cov_262.414355 unplaced-scaffold na na SRSH01000011.1 = NZ_SRSH01000011.1 Primary Assembly 178791 na NODE_12_length_172117_cov_265.625493 unplaced-scaffold na na SRSH01000012.1 = NZ_SRSH01000012.1 Primary Assembly 172117 na NODE_13_length_149621_cov_268.098128 unplaced-scaffold na na SRSH01000013.1 = NZ_SRSH01000013.1 Primary Assembly 149621 na NODE_14_length_147592_cov_260.644719 unplaced-scaffold na na SRSH01000014.1 = NZ_SRSH01000014.1 Primary Assembly 147592 na NODE_15_length_144725_cov_264.905313 unplaced-scaffold na na SRSH01000015.1 = NZ_SRSH01000015.1 Primary Assembly 144725 na NODE_16_length_142318_cov_270.072218 unplaced-scaffold na na SRSH01000016.1 = NZ_SRSH01000016.1 Primary Assembly 142318 na NODE_17_length_110019_cov_276.349057 unplaced-scaffold na na SRSH01000017.1 = NZ_SRSH01000017.1 Primary Assembly 110019 na NODE_18_length_106317_cov_269.373872 unplaced-scaffold na na SRSH01000018.1 = NZ_SRSH01000018.1 Primary Assembly 106317 na NODE_19_length_106085_cov_272.067364 unplaced-scaffold na na SRSH01000019.1 = NZ_SRSH01000019.1 Primary Assembly 106085 na NODE_20_length_96763_cov_255.202595 unplaced-scaffold na na SRSH01000020.1 = NZ_SRSH01000020.1 Primary Assembly 96763 na NODE_21_length_91696_cov_279.211842 unplaced-scaffold na na SRSH01000021.1 = NZ_SRSH01000021.1 Primary Assembly 91696 na NODE_22_length_83550_cov_261.764009 unplaced-scaffold na na SRSH01000022.1 = NZ_SRSH01000022.1 Primary Assembly 83550 na NODE_23_length_72979_cov_262.467305 unplaced-scaffold na na SRSH01000023.1 = NZ_SRSH01000023.1 Primary Assembly 72979 na NODE_24_length_67518_cov_277.944017 unplaced-scaffold na na SRSH01000024.1 = NZ_SRSH01000024.1 Primary Assembly 67518 na NODE_25_length_64544_cov_278.521445 unplaced-scaffold na na SRSH01000025.1 = NZ_SRSH01000025.1 Primary Assembly 64544 na NODE_26_length_60372_cov_259.102906 unplaced-scaffold na na SRSH01000026.1 = NZ_SRSH01000026.1 Primary Assembly 60372 na NODE_27_length_59197_cov_284.849562 unplaced-scaffold na na SRSH01000027.1 = NZ_SRSH01000027.1 Primary Assembly 59197 na NODE_28_length_56602_cov_264.739425 unplaced-scaffold na na SRSH01000028.1 = NZ_SRSH01000028.1 Primary Assembly 56602 na NODE_29_length_48247_cov_300.742997 unplaced-scaffold na na SRSH01000029.1 = NZ_SRSH01000029.1 Primary Assembly 48247 na NODE_30_length_45987_cov_253.566763 unplaced-scaffold na na SRSH01000030.1 = NZ_SRSH01000030.1 Primary Assembly 45987 na NODE_32_length_18498_cov_306.872925 unplaced-scaffold na na SRSH01000031.1 = NZ_SRSH01000031.1 Primary Assembly 18498 na NODE_33_length_17902_cov_258.194837 unplaced-scaffold na na SRSH01000032.1 = NZ_SRSH01000032.1 Primary Assembly 17902 na NODE_34_length_14646_cov_301.142739 unplaced-scaffold na na SRSH01000033.1 = NZ_SRSH01000033.1 Primary Assembly 14646 na NODE_35_length_11719_cov_281.107968 unplaced-scaffold na na SRSH01000034.1 = NZ_SRSH01000034.1 Primary Assembly 11719 na NODE_37_length_10733_cov_278.202168 unplaced-scaffold na na SRSH01000035.1 = NZ_SRSH01000035.1 Primary Assembly 10733 na NODE_42_length_8631_cov_321.366831 unplaced-scaffold na na SRSH01000036.1 = NZ_SRSH01000036.1 Primary Assembly 8631 na NODE_54_length_6570_cov_279.912983 unplaced-scaffold na na SRSH01000037.1 = NZ_SRSH01000037.1 Primary Assembly 6570 na NODE_132_length_3881_cov_303.727515 unplaced-scaffold na na SRSH01000038.1 = NZ_SRSH01000038.1 Primary Assembly 3881 na NODE_147_length_3716_cov_294.750070 unplaced-scaffold na na SRSH01000039.1 = NZ_SRSH01000039.1 Primary Assembly 3716 na NODE_334_length_2501_cov_275.250210 unplaced-scaffold na na SRSH01000040.1 = NZ_SRSH01000040.1 Primary Assembly 2501 na NODE_595_length_1668_cov_1162.148867 unplaced-scaffold na na SRSH01000041.1 = NZ_SRSH01000041.1 Primary Assembly 1668 na NODE_849_length_1261_cov_2455.811951 unplaced-scaffold na na SRSH01000042.1 = NZ_SRSH01000042.1 Primary Assembly 1261 na