# Assembly name: UCSF_Mcou_1 # Organism name: Mastomys coucha (southern multimammate mouse) # Isolate: ucsf_1 # Sex: male # Taxid: 35658 # BioSample: SAMN07635206 # BioProject: PRJNA406979 # Submitter: University of California, San Francisco # Date: 2019-09-24 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: VSBT01 # Assembly method: Meraculous v. 2.0.5; Ragout v. 2.0 # Expected final version: yes # Reference guided assembly: GCA_000001635.2; GCA_000001895.4 # Genome coverage: 73.0x # Sequencing technology: Illumina HiSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_008632895.1 # RefSeq assembly accession: GCF_008632895.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_008632905.1 GCF_008632905.1 Primary Assembly ## GCF_009176205.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chrX assembled-molecule X Chromosome CM018029.1 = NC_045030.1 Primary Assembly 163378487 na chrY assembled-molecule Y Chromosome CM018030.1 = NC_045031.1 Primary Assembly 508531 na pScaffold1 unplaced-scaffold na na VSBT01000001.1 = NW_022196891.1 Primary Assembly 92586314 na pScaffold2 unplaced-scaffold na na VSBT01000002.1 = NW_022196902.1 Primary Assembly 26520347 na pScaffold3 unplaced-scaffold na na VSBT01000003.1 = NW_022196909.1 Primary Assembly 72684575 na pScaffold4 unplaced-scaffold na na VSBT01000004.1 = NW_022196910.1 Primary Assembly 57605464 na pScaffold5 unplaced-scaffold na na VSBT01000005.1 = NW_022196911.1 Primary Assembly 118621203 na pScaffold6 unplaced-scaffold na na VSBT01000006.1 = NW_022196912.1 Primary Assembly 132969947 na pScaffold7 unplaced-scaffold na na VSBT01000007.1 = NW_022196913.1 Primary Assembly 107205117 na pScaffold8 unplaced-scaffold na na VSBT01000008.1 = NW_022196914.1 Primary Assembly 80121174 na pScaffold9 unplaced-scaffold na na VSBT01000009.1 = NW_022196915.1 Primary Assembly 109581661 na pScaffold10 unplaced-scaffold na na VSBT01000010.1 = NW_022196892.1 Primary Assembly 6222891 na pScaffold11 unplaced-scaffold na na VSBT01000011.1 = NW_022196893.1 Primary Assembly 35220015 na pScaffold12 unplaced-scaffold na na VSBT01000012.1 = NW_022196894.1 Primary Assembly 96390841 na pScaffold13 unplaced-scaffold na na VSBT01000013.1 = NW_022196895.1 Primary Assembly 86217402 na pScaffold14 unplaced-scaffold na na VSBT01000014.1 = NW_022196896.1 Primary Assembly 138058970 na pScaffold15 unplaced-scaffold na na VSBT01000015.1 = NW_022196897.1 Primary Assembly 168451034 na pScaffold16 unplaced-scaffold na na VSBT01000016.1 = NW_022196898.1 Primary Assembly 107530097 na pScaffold17 unplaced-scaffold na na VSBT01000017.1 = NW_022196899.1 Primary Assembly 42403592 na pScaffold18 unplaced-scaffold na na VSBT01000018.1 = NW_022196900.1 Primary Assembly 115649199 na pScaffold19 unplaced-scaffold na na VSBT01000019.1 = NW_022196901.1 Primary Assembly 24753510 na pScaffold20 unplaced-scaffold na na VSBT01000020.1 = NW_022196903.1 Primary Assembly 143710747 na pScaffold21 unplaced-scaffold na na VSBT01000021.1 = NW_022196904.1 Primary Assembly 192747633 na pScaffold22 unplaced-scaffold na na VSBT01000022.1 = NW_022196905.1 Primary Assembly 267620125 na pScaffold23 unplaced-scaffold na na VSBT01000023.1 = NW_022196906.1 Primary Assembly 118346219 na pScaffold24 unplaced-scaffold na na VSBT01000024.1 = NW_022196907.1 Primary Assembly 1642656 na pScaffold25 unplaced-scaffold na na VSBT01000026.1 = NW_022196908.1 Primary Assembly 420868 na MT assembled-molecule MT Mitochondrion na <> NC_036018.1 non-nuclear 16216 na