# Assembly name: ASM883103v1 # Organism name: Ellagibacter isourolithinifaciens (actinobacteria) # Infraspecific name: strain=DSM 104140 # Taxid: 2137581 # BioSample: SAMN12860422 # BioProject: PRJNA574580 # Submitter: Max Rubner-Institut # Date: 2019-10-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: WAJR01 # Assembly method: SPAdes v. 3.13.1 # Expected final version: yes # Genome coverage: 127.67x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_008831035.1 # RefSeq assembly accession: GCF_008831035.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_008831065.1 GCF_008831065.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name DSM104140T_contig_001 unplaced-scaffold na na WAJR01000001.1 = NZ_WAJR01000001.1 Primary Assembly 266043 na DSM104140T_contig_002 unplaced-scaffold na na WAJR01000002.1 = NZ_WAJR01000002.1 Primary Assembly 206687 na DSM104140T_contig_003 unplaced-scaffold na na WAJR01000003.1 = NZ_WAJR01000003.1 Primary Assembly 139788 na DSM104140T_contig_004 unplaced-scaffold na na WAJR01000004.1 = NZ_WAJR01000004.1 Primary Assembly 116827 na DSM104140T_contig_005 unplaced-scaffold na na WAJR01000005.1 = NZ_WAJR01000005.1 Primary Assembly 114632 na DSM104140T_contig_006 unplaced-scaffold na na WAJR01000006.1 = NZ_WAJR01000006.1 Primary Assembly 106755 na DSM104140T_contig_007 unplaced-scaffold na na WAJR01000007.1 = NZ_WAJR01000007.1 Primary Assembly 105968 na DSM104140T_contig_008 unplaced-scaffold na na WAJR01000008.1 = NZ_WAJR01000008.1 Primary Assembly 105092 na DSM104140T_contig_009 unplaced-scaffold na na WAJR01000009.1 = NZ_WAJR01000009.1 Primary Assembly 100872 na DSM104140T_contig_010 unplaced-scaffold na na WAJR01000010.1 = NZ_WAJR01000010.1 Primary Assembly 91232 na DSM104140T_contig_011 unplaced-scaffold na na WAJR01000011.1 = NZ_WAJR01000011.1 Primary Assembly 66860 na DSM104140T_contig_012 unplaced-scaffold na na WAJR01000012.1 = NZ_WAJR01000012.1 Primary Assembly 55862 na DSM104140T_contig_013 unplaced-scaffold na na WAJR01000013.1 = NZ_WAJR01000013.1 Primary Assembly 54259 na DSM104140T_contig_014 unplaced-scaffold na na WAJR01000014.1 = NZ_WAJR01000014.1 Primary Assembly 53291 na DSM104140T_contig_015 unplaced-scaffold na na WAJR01000015.1 = NZ_WAJR01000015.1 Primary Assembly 52751 na DSM104140T_contig_016 unplaced-scaffold na na WAJR01000016.1 = NZ_WAJR01000016.1 Primary Assembly 49499 na DSM104140T_contig_017 unplaced-scaffold na na WAJR01000017.1 = NZ_WAJR01000017.1 Primary Assembly 48122 na DSM104140T_contig_018 unplaced-scaffold na na WAJR01000018.1 = NZ_WAJR01000018.1 Primary Assembly 42555 na DSM104140T_contig_019 unplaced-scaffold na na WAJR01000019.1 = NZ_WAJR01000019.1 Primary Assembly 42482 na DSM104140T_contig_020 unplaced-scaffold na na WAJR01000020.1 = NZ_WAJR01000020.1 Primary Assembly 40971 na DSM104140T_contig_021 unplaced-scaffold na na WAJR01000021.1 = NZ_WAJR01000021.1 Primary Assembly 40346 na DSM104140T_contig_022 unplaced-scaffold na na WAJR01000022.1 = NZ_WAJR01000022.1 Primary Assembly 37916 na DSM104140T_contig_023 unplaced-scaffold na na WAJR01000023.1 = NZ_WAJR01000023.1 Primary Assembly 37492 na DSM104140T_contig_024 unplaced-scaffold na na WAJR01000024.1 = NZ_WAJR01000024.1 Primary Assembly 34727 na DSM104140T_contig_025 unplaced-scaffold na na WAJR01000025.1 = NZ_WAJR01000025.1 Primary Assembly 34548 na DSM104140T_contig_026 unplaced-scaffold na na WAJR01000026.1 = NZ_WAJR01000026.1 Primary Assembly 34537 na DSM104140T_contig_027 unplaced-scaffold na na WAJR01000027.1 = NZ_WAJR01000027.1 Primary Assembly 32601 na DSM104140T_contig_028 unplaced-scaffold na na WAJR01000028.1 = NZ_WAJR01000028.1 Primary Assembly 31670 na DSM104140T_contig_029 unplaced-scaffold na na WAJR01000029.1 = NZ_WAJR01000029.1 Primary Assembly 30242 na DSM104140T_contig_030 unplaced-scaffold na na WAJR01000030.1 = NZ_WAJR01000030.1 Primary Assembly 22677 na DSM104140T_contig_031 unplaced-scaffold na na WAJR01000031.1 = NZ_WAJR01000031.1 Primary Assembly 22384 na DSM104140T_contig_032 unplaced-scaffold na na WAJR01000032.1 = NZ_WAJR01000032.1 Primary Assembly 22316 na DSM104140T_contig_033 unplaced-scaffold na na WAJR01000033.1 = NZ_WAJR01000033.1 Primary Assembly 19939 na DSM104140T_contig_034 unplaced-scaffold na na WAJR01000034.1 = NZ_WAJR01000034.1 Primary Assembly 19396 na DSM104140T_contig_035 unplaced-scaffold na na WAJR01000035.1 = NZ_WAJR01000035.1 Primary Assembly 16522 na DSM104140T_contig_036 unplaced-scaffold na na WAJR01000036.1 = NZ_WAJR01000036.1 Primary Assembly 14924 na DSM104140T_contig_037 unplaced-scaffold na na WAJR01000037.1 = NZ_WAJR01000037.1 Primary Assembly 14192 na DSM104140T_contig_038 unplaced-scaffold na na WAJR01000038.1 = NZ_WAJR01000038.1 Primary Assembly 13661 na DSM104140T_contig_039 unplaced-scaffold na na WAJR01000039.1 = NZ_WAJR01000039.1 Primary Assembly 12874 na DSM104140T_contig_040 unplaced-scaffold na na WAJR01000040.1 = NZ_WAJR01000040.1 Primary Assembly 12561 na DSM104140T_contig_041 unplaced-scaffold na na WAJR01000041.1 = NZ_WAJR01000041.1 Primary Assembly 10577 na DSM104140T_contig_042 unplaced-scaffold na na WAJR01000042.1 = NZ_WAJR01000042.1 Primary Assembly 9096 na DSM104140T_contig_043 unplaced-scaffold na na WAJR01000043.1 = NZ_WAJR01000043.1 Primary Assembly 8512 na DSM104140T_contig_044 unplaced-scaffold na na WAJR01000044.1 = NZ_WAJR01000044.1 Primary Assembly 5992 na DSM104140T_contig_045 unplaced-scaffold na na WAJR01000045.1 = NZ_WAJR01000045.1 Primary Assembly 5683 na DSM104140T_contig_046 unplaced-scaffold na na WAJR01000046.1 = NZ_WAJR01000046.1 Primary Assembly 5017 na DSM104140T_contig_047 unplaced-scaffold na na WAJR01000047.1 = NZ_WAJR01000047.1 Primary Assembly 4760 na DSM104140T_contig_048 unplaced-scaffold na na WAJR01000048.1 = NZ_WAJR01000048.1 Primary Assembly 3249 na DSM104140T_contig_049 unplaced-scaffold na na WAJR01000049.1 = NZ_WAJR01000049.1 Primary Assembly 2732 na DSM104140T_contig_050 unplaced-scaffold na na WAJR01000050.1 = NZ_WAJR01000050.1 Primary Assembly 2730 na DSM104140T_contig_051 unplaced-scaffold na na WAJR01000051.1 = NZ_WAJR01000051.1 Primary Assembly 2624 na DSM104140T_contig_052 unplaced-scaffold na na WAJR01000052.1 = NZ_WAJR01000052.1 Primary Assembly 2601 na DSM104140T_contig_053 unplaced-scaffold na na WAJR01000053.1 = NZ_WAJR01000053.1 Primary Assembly 2566 na DSM104140T_contig_054 unplaced-scaffold na na WAJR01000054.1 = NZ_WAJR01000054.1 Primary Assembly 2283 na DSM104140T_contig_055 unplaced-scaffold na na WAJR01000055.1 = NZ_WAJR01000055.1 Primary Assembly 2237 na DSM104140T_contig_056 unplaced-scaffold na na WAJR01000056.1 = NZ_WAJR01000056.1 Primary Assembly 2186 na DSM104140T_contig_057 unplaced-scaffold na na WAJR01000057.1 = NZ_WAJR01000057.1 Primary Assembly 1859 na DSM104140T_contig_058 unplaced-scaffold na na WAJR01000058.1 = NZ_WAJR01000058.1 Primary Assembly 1598 na DSM104140T_contig_059 unplaced-scaffold na na WAJR01000059.1 = NZ_WAJR01000059.1 Primary Assembly 1566 na DSM104140T_contig_060 unplaced-scaffold na na WAJR01000060.1 = NZ_WAJR01000060.1 Primary Assembly 1502 na DSM104140T_contig_061 unplaced-scaffold na na WAJR01000061.1 = NZ_WAJR01000061.1 Primary Assembly 1449 na DSM104140T_contig_062 unplaced-scaffold na na WAJR01000062.1 = NZ_WAJR01000062.1 Primary Assembly 1420 na DSM104140T_contig_063 unplaced-scaffold na na WAJR01000063.1 = NZ_WAJR01000063.1 Primary Assembly 1247 na DSM104140T_contig_064 unplaced-scaffold na na WAJR01000064.1 = NZ_WAJR01000064.1 Primary Assembly 1210 na DSM104140T_contig_065 unplaced-scaffold na na WAJR01000065.1 = NZ_WAJR01000065.1 Primary Assembly 1119 na DSM104140T_contig_066 unplaced-scaffold na na WAJR01000066.1 = NZ_WAJR01000066.1 Primary Assembly 963 na DSM104140T_contig_067 unplaced-scaffold na na WAJR01000067.1 = NZ_WAJR01000067.1 Primary Assembly 833 na DSM104140T_contig_068 unplaced-scaffold na na WAJR01000068.1 = NZ_WAJR01000068.1 Primary Assembly 730 na DSM104140T_contig_069 unplaced-scaffold na na WAJR01000069.1 = NZ_WAJR01000069.1 Primary Assembly 711 na DSM104140T_contig_070 unplaced-scaffold na na WAJR01000070.1 = NZ_WAJR01000070.1 Primary Assembly 676 na DSM104140T_contig_071 unplaced-scaffold na na WAJR01000071.1 = NZ_WAJR01000071.1 Primary Assembly 647 na DSM104140T_contig_072 unplaced-scaffold na na WAJR01000072.1 = NZ_WAJR01000072.1 Primary Assembly 643 na DSM104140T_contig_073 unplaced-scaffold na na WAJR01000073.1 = NZ_WAJR01000073.1 Primary Assembly 622 na DSM104140T_contig_074 unplaced-scaffold na na WAJR01000074.1 = NZ_WAJR01000074.1 Primary Assembly 603 na DSM104140T_contig_075 unplaced-scaffold na na WAJR01000075.1 = NZ_WAJR01000075.1 Primary Assembly 575 na DSM104140T_contig_076 unplaced-scaffold na na WAJR01000076.1 = NZ_WAJR01000076.1 Primary Assembly 568 na DSM104140T_contig_077 unplaced-scaffold na na WAJR01000077.1 = NZ_WAJR01000077.1 Primary Assembly 565 na DSM104140T_contig_078 unplaced-scaffold na na WAJR01000078.1 = NZ_WAJR01000078.1 Primary Assembly 535 na DSM104140T_contig_079 unplaced-scaffold na na WAJR01000079.1 = NZ_WAJR01000079.1 Primary Assembly 532 na DSM104140T_contig_080 unplaced-scaffold na na WAJR01000080.1 = NZ_WAJR01000080.1 Primary Assembly 513 na DSM104140T_contig_081 unplaced-scaffold na na WAJR01000081.1 = NZ_WAJR01000081.1 Primary Assembly 513 na