# Assembly name: ASM969084v1 # Organism name: Campylobacter portucalensis (e-proteobacteria) # Infraspecific name: strain=FMV-PI01 # Taxid: 2608384 # BioSample: SAMN12708562 # BioProject: PRJNA564293 # Submitter: Faculdade de Medicina Veterinaria, Universidade de Lisboa # Date: 2019-11-22 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: VWSJ01 # Assembly method: CLC Genomics Workbench v. 11.0.1 # Expected final version: yes # Genome coverage: 200.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_009690845.1 # RefSeq assembly accession: GCF_009690845.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_009690875.1 GCF_009690875.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name FMV-PI01_contig_1 unplaced-scaffold na na VWSJ01000001.1 = NZ_VWSJ01000001.1 Primary Assembly 182527 na FMV-PI01_contig_2 unplaced-scaffold na na VWSJ01000002.1 = NZ_VWSJ01000002.1 Primary Assembly 74628 na FMV-PI01_contig_3 unplaced-scaffold na na VWSJ01000003.1 = NZ_VWSJ01000003.1 Primary Assembly 35744 na FMV-PI01_contig_4 unplaced-scaffold na na VWSJ01000004.1 = NZ_VWSJ01000004.1 Primary Assembly 114251 na FMV-PI01_contig_5 unplaced-scaffold na na VWSJ01000005.1 = NZ_VWSJ01000005.1 Primary Assembly 41261 na FMV-PI01_contig_6 unplaced-scaffold na na VWSJ01000006.1 = NZ_VWSJ01000006.1 Primary Assembly 112099 na FMV-PI01_contig_7 unplaced-scaffold na na VWSJ01000007.1 = NZ_VWSJ01000007.1 Primary Assembly 81864 na FMV-PI01_contig_8 unplaced-scaffold na na VWSJ01000008.1 = NZ_VWSJ01000008.1 Primary Assembly 73558 na FMV-PI01_contig_9 unplaced-scaffold na na VWSJ01000009.1 = NZ_VWSJ01000009.1 Primary Assembly 68739 na FMV-PI01_contig_10 unplaced-scaffold na na VWSJ01000010.1 = NZ_VWSJ01000010.1 Primary Assembly 21339 na FMV-PI01_contig_11 unplaced-scaffold na na VWSJ01000011.1 = NZ_VWSJ01000011.1 Primary Assembly 45074 na FMV-PI01_contig_12 unplaced-scaffold na na VWSJ01000012.1 = NZ_VWSJ01000012.1 Primary Assembly 76514 na FMV-PI01_contig_13 unplaced-scaffold na na VWSJ01000013.1 = NZ_VWSJ01000013.1 Primary Assembly 2069 na FMV-PI01_contig_14 unplaced-scaffold na na VWSJ01000014.1 = NZ_VWSJ01000014.1 Primary Assembly 19609 na FMV-PI01_contig_15 unplaced-scaffold na na VWSJ01000015.1 = NZ_VWSJ01000015.1 Primary Assembly 61520 na FMV-PI01_contig_16 unplaced-scaffold na na VWSJ01000016.1 = NZ_VWSJ01000016.1 Primary Assembly 19215 na FMV-PI01_contig_17 unplaced-scaffold na na VWSJ01000017.1 = NZ_VWSJ01000017.1 Primary Assembly 7015 na FMV-PI01_contig_18 unplaced-scaffold na na VWSJ01000018.1 = NZ_VWSJ01000018.1 Primary Assembly 29605 na FMV-PI01_contig_19 unplaced-scaffold na na VWSJ01000019.1 = NZ_VWSJ01000019.1 Primary Assembly 36984 na FMV-PI01_contig_20 unplaced-scaffold na na VWSJ01000020.1 = NZ_VWSJ01000020.1 Primary Assembly 14663 na FMV-PI01_contig_21 unplaced-scaffold na na VWSJ01000021.1 = NZ_VWSJ01000021.1 Primary Assembly 25861 na FMV-PI01_contig_22 unplaced-scaffold na na VWSJ01000022.1 = NZ_VWSJ01000022.1 Primary Assembly 4339 na FMV-PI01_contig_23 unplaced-scaffold na na VWSJ01000023.1 = NZ_VWSJ01000023.1 Primary Assembly 72132 na FMV-PI01_contig_24 unplaced-scaffold na na VWSJ01000024.1 = NZ_VWSJ01000024.1 Primary Assembly 43959 na FMV-PI01_contig_25 unplaced-scaffold na na VWSJ01000025.1 = NZ_VWSJ01000025.1 Primary Assembly 66527 na FMV-PI01_contig_26 unplaced-scaffold na na VWSJ01000026.1 = NZ_VWSJ01000026.1 Primary Assembly 2323 na FMV-PI01_contig_27 unplaced-scaffold na na VWSJ01000027.1 = NZ_VWSJ01000027.1 Primary Assembly 101402 na FMV-PI01_contig_28 unplaced-scaffold na na VWSJ01000028.1 = NZ_VWSJ01000028.1 Primary Assembly 20058 na FMV-PI01_contig_29 unplaced-scaffold na na VWSJ01000029.1 = NZ_VWSJ01000029.1 Primary Assembly 2075 na FMV-PI01_contig_30 unplaced-scaffold na na VWSJ01000030.1 = NZ_VWSJ01000030.1 Primary Assembly 6716 na FMV-PI01_contig_31 unplaced-scaffold na na VWSJ01000031.1 = NZ_VWSJ01000031.1 Primary Assembly 48959 na FMV-PI01_contig_32 unplaced-scaffold na na VWSJ01000032.1 = NZ_VWSJ01000032.1 Primary Assembly 6211 na FMV-PI01_contig_33 unplaced-scaffold na na VWSJ01000033.1 = NZ_VWSJ01000033.1 Primary Assembly 12397 na FMV-PI01_contig_34 unplaced-scaffold na na VWSJ01000034.1 = NZ_VWSJ01000034.1 Primary Assembly 41157 na FMV-PI01_contig_35 unplaced-scaffold na na VWSJ01000035.1 = NZ_VWSJ01000035.1 Primary Assembly 1948 na FMV-PI01_contig_36 unplaced-scaffold na na VWSJ01000036.1 = NZ_VWSJ01000036.1 Primary Assembly 28427 na FMV-PI01_contig_37 unplaced-scaffold na na VWSJ01000037.1 = NZ_VWSJ01000037.1 Primary Assembly 1974 na FMV-PI01_contig_38 unplaced-scaffold na na VWSJ01000038.1 = NZ_VWSJ01000038.1 Primary Assembly 22558 na FMV-PI01_contig_39 unplaced-scaffold na na VWSJ01000039.1 = NZ_VWSJ01000039.1 Primary Assembly 39703 na FMV-PI01_contig_40 unplaced-scaffold na na VWSJ01000040.1 = NZ_VWSJ01000040.1 Primary Assembly 11789 na FMV-PI01_contig_41 unplaced-scaffold na na VWSJ01000041.1 = NZ_VWSJ01000041.1 Primary Assembly 4920 na FMV-PI01_contig_42 unplaced-scaffold na na VWSJ01000042.1 = NZ_VWSJ01000042.1 Primary Assembly 7939 na FMV-PI01_contig_43 unplaced-scaffold na na VWSJ01000043.1 = NZ_VWSJ01000043.1 Primary Assembly 3632 na FMV-PI01_contig_44 unplaced-scaffold na na VWSJ01000044.1 = NZ_VWSJ01000044.1 Primary Assembly 3792 na FMV-PI01_contig_45 unplaced-scaffold na na VWSJ01000045.1 = NZ_VWSJ01000045.1 Primary Assembly 6163 na FMV-PI01_contig_46 unplaced-scaffold na na VWSJ01000046.1 = NZ_VWSJ01000046.1 Primary Assembly 786 na FMV-PI01_contig_47 unplaced-scaffold na na VWSJ01000047.1 = NZ_VWSJ01000047.1 Primary Assembly 339 na FMV-PI01_contig_48 unplaced-scaffold na na VWSJ01000048.1 = NZ_VWSJ01000048.1 Primary Assembly 318 na FMV-PI01_contig_49 unplaced-scaffold na na VWSJ01000049.1 = NZ_VWSJ01000049.1 Primary Assembly 466 na FMV-PI01_contig_50 unplaced-scaffold na na VWSJ01000050.1 = NZ_VWSJ01000050.1 Primary Assembly 1174 na FMV-PI01_contig_51 unplaced-scaffold na na VWSJ01000051.1 = NZ_VWSJ01000051.1 Primary Assembly 2846 na FMV-PI01_contig_52 unplaced-scaffold na na VWSJ01000052.1 = NZ_VWSJ01000052.1 Primary Assembly 297 na FMV-PI01_contig_53 unplaced-scaffold na na VWSJ01000053.1 = NZ_VWSJ01000053.1 Primary Assembly 417 na FMV-PI01_contig_54 unplaced-scaffold na na VWSJ01000054.1 = NZ_VWSJ01000054.1 Primary Assembly 1726 na FMV-PI01_contig_55 unplaced-scaffold na na VWSJ01000055.1 = NZ_VWSJ01000055.1 Primary Assembly 1972 na FMV-PI01_contig_56 unplaced-scaffold na na VWSJ01000056.1 = NZ_VWSJ01000056.1 Primary Assembly 1133 na FMV-PI01_contig_57 unplaced-scaffold na na VWSJ01000057.1 = NZ_VWSJ01000057.1 Primary Assembly 652 na FMV-PI01_contig_58 unplaced-scaffold na na VWSJ01000058.1 = NZ_VWSJ01000058.1 Primary Assembly 796 na FMV-PI01_contig_59 unplaced-scaffold na na VWSJ01000059.1 = NZ_VWSJ01000059.1 Primary Assembly 1290 na FMV-PI01_contig_60 unplaced-scaffold na na VWSJ01000060.1 = NZ_VWSJ01000060.1 Primary Assembly 1688 na FMV-PI01_contig_61 unplaced-scaffold na na VWSJ01000061.1 = NZ_VWSJ01000061.1 Primary Assembly 1445 na FMV-PI01_contig_62 unplaced-scaffold na na VWSJ01000062.1 = NZ_VWSJ01000062.1 Primary Assembly 3433 na FMV-PI01_contig_63 unplaced-scaffold na na VWSJ01000063.1 = NZ_VWSJ01000063.1 Primary Assembly 420 na FMV-PI01_contig_64 unplaced-scaffold na na VWSJ01000064.1 = NZ_VWSJ01000064.1 Primary Assembly 1526 na FMV-PI01_contig_65 unplaced-scaffold na na VWSJ01000065.1 = NZ_VWSJ01000065.1 Primary Assembly 2883 na FMV-PI01_contig_66 unplaced-scaffold na na VWSJ01000066.1 = NZ_VWSJ01000066.1 Primary Assembly 384 na FMV-PI01_contig_67 unplaced-scaffold na na VWSJ01000067.1 = NZ_VWSJ01000067.1 Primary Assembly 970 na FMV-PI01_contig_68 unplaced-scaffold na na VWSJ01000068.1 = NZ_VWSJ01000068.1 Primary Assembly 2750 na FMV-PI01_contig_69 unplaced-scaffold na na VWSJ01000069.1 = NZ_VWSJ01000069.1 Primary Assembly 7506 na FMV-PI01_contig_70 unplaced-scaffold na na VWSJ01000070.1 = NZ_VWSJ01000070.1 Primary Assembly 423 na FMV-PI01_contig_71 unplaced-scaffold na na VWSJ01000071.1 = NZ_VWSJ01000071.1 Primary Assembly 4076 na FMV-PI01_contig_72 unplaced-scaffold na na VWSJ01000072.1 = NZ_VWSJ01000072.1 Primary Assembly 618 na FMV-PI01_contig_73 unplaced-scaffold na na VWSJ01000073.1 = NZ_VWSJ01000073.1 Primary Assembly 1171 na FMV-PI01_contig_74 unplaced-scaffold na na VWSJ01000074.1 = NZ_VWSJ01000074.1 Primary Assembly 525 na FMV-PI01_contig_75 unplaced-scaffold na na VWSJ01000075.1 = NZ_VWSJ01000075.1 Primary Assembly 876 na FMV-PI01_contig_76 unplaced-scaffold na na VWSJ01000076.1 = NZ_VWSJ01000076.1 Primary Assembly 245 na FMV-PI01_contig_77 unplaced-scaffold na na VWSJ01000077.1 = NZ_VWSJ01000077.1 Primary Assembly 1075 na FMV-PI01_contig_78 unplaced-scaffold na na VWSJ01000078.1 = NZ_VWSJ01000078.1 Primary Assembly 496 na FMV-PI01_contig_79 unplaced-scaffold na na VWSJ01000079.1 = NZ_VWSJ01000079.1 Primary Assembly 550 na FMV-PI01_contig_80 unplaced-scaffold na na VWSJ01000080.1 = NZ_VWSJ01000080.1 Primary Assembly 493 na FMV-PI01_contig_81 unplaced-scaffold na na VWSJ01000081.1 = NZ_VWSJ01000081.1 Primary Assembly 4323 na FMV-PI01_contig_82 unplaced-scaffold na na VWSJ01000082.1 = NZ_VWSJ01000082.1 Primary Assembly 497 na FMV-PI01_contig_83 unplaced-scaffold na na VWSJ01000083.1 = NZ_VWSJ01000083.1 Primary Assembly 355 na FMV-PI01_contig_84 unplaced-scaffold na na VWSJ01000084.1 = NZ_VWSJ01000084.1 Primary Assembly 1842 na FMV-PI01_contig_85 unplaced-scaffold na na VWSJ01000085.1 = NZ_VWSJ01000085.1 Primary Assembly 480 na FMV-PI01_contig_86 unplaced-scaffold na na VWSJ01000086.1 = NZ_VWSJ01000086.1 Primary Assembly 268 na FMV-PI01_contig_87 unplaced-scaffold na na VWSJ01000087.1 = NZ_VWSJ01000087.1 Primary Assembly 329 na FMV-PI01_contig_88 unplaced-scaffold na na VWSJ01000088.1 = NZ_VWSJ01000088.1 Primary Assembly 477 na FMV-PI01_contig_89 unplaced-scaffold na na VWSJ01000089.1 = NZ_VWSJ01000089.1 Primary Assembly 436 na FMV-PI01_contig_90 unplaced-scaffold na na VWSJ01000090.1 = NZ_VWSJ01000090.1 Primary Assembly 366 na FMV-PI01_contig_91 unplaced-scaffold na na VWSJ01000091.1 = NZ_VWSJ01000091.1 Primary Assembly 283 na FMV-PI01_contig_92 unplaced-scaffold na na VWSJ01000092.1 = NZ_VWSJ01000092.1 Primary Assembly 783 na FMV-PI01_contig_93 unplaced-scaffold na na VWSJ01000093.1 = NZ_VWSJ01000093.1 Primary Assembly 764 na FMV-PI01_contig_94 unplaced-scaffold na na VWSJ01000094.1 = NZ_VWSJ01000094.1 Primary Assembly 1130 na FMV-PI01_contig_95 unplaced-scaffold na na VWSJ01000095.1 = NZ_VWSJ01000095.1 Primary Assembly 254 na FMV-PI01_contig_96 unplaced-scaffold na na VWSJ01000096.1 = NZ_VWSJ01000096.1 Primary Assembly 1629 na FMV-PI01_contig_97 unplaced-scaffold na na VWSJ01000097.1 = NZ_VWSJ01000097.1 Primary Assembly 485 na FMV-PI01_contig_98 unplaced-scaffold na na VWSJ01000098.1 = NZ_VWSJ01000098.1 Primary Assembly 228 na