# Assembly name: ASM970751v1 # Organism name: Pseudomonas karstica (g-proteobacteria) # Infraspecific name: strain=CCM 7891 # Taxid: 1055468 # BioSample: SAMN13220235 # BioProject: PRJNA587868 # Submitter: Masaryk University # Date: 2019-11-24 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: WLYI01 # Assembly method: Unicycler v. 0.4.8-beta # Expected final version: yes # Genome coverage: 72.0x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_009707515.1 # RefSeq assembly accession: GCF_009707515.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_009707575.1 GCF_009707575.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Pseudomonas_CCM7891_cont1_321588nt_UniDepth0.99x unplaced-scaffold na na WLYI01000001.1 = NZ_WLYI01000001.1 Primary Assembly 321588 na Pseudomonas_CCM7891_cont2_302891nt_UniDepth0.98x unplaced-scaffold na na WLYI01000002.1 = NZ_WLYI01000002.1 Primary Assembly 302891 na Pseudomonas_CCM7891_cont3_299112nt_UniDepth1.00x unplaced-scaffold na na WLYI01000003.1 = NZ_WLYI01000003.1 Primary Assembly 299112 na Pseudomonas_CCM7891_cont4_235416nt_UniDepth1.00x unplaced-scaffold na na WLYI01000004.1 = NZ_WLYI01000004.1 Primary Assembly 235416 na Pseudomonas_CCM7891_cont5_222265nt_UniDepth1.00x unplaced-scaffold na na WLYI01000005.1 = NZ_WLYI01000005.1 Primary Assembly 222265 na Pseudomonas_CCM7891_cont6_182053nt_UniDepth1.01x unplaced-scaffold na na WLYI01000006.1 = NZ_WLYI01000006.1 Primary Assembly 182053 na Pseudomonas_CCM7891_cont7_157887nt_UniDepth0.99x unplaced-scaffold na na WLYI01000007.1 = NZ_WLYI01000007.1 Primary Assembly 157887 na Pseudomonas_CCM7891_cont8_156144nt_UniDepth1.02x unplaced-scaffold na na WLYI01000008.1 = NZ_WLYI01000008.1 Primary Assembly 156144 na Pseudomonas_CCM7891_cont9_153373nt_UniDepth1.04x unplaced-scaffold na na WLYI01000009.1 = NZ_WLYI01000009.1 Primary Assembly 153373 na Pseudomonas_CCM7891_cont10_144673nt_UniDepth1.01x unplaced-scaffold na na WLYI01000010.1 = NZ_WLYI01000010.1 Primary Assembly 144673 na Pseudomonas_CCM7891_cont11_141321nt_UniDepth0.98x unplaced-scaffold na na WLYI01000011.1 = NZ_WLYI01000011.1 Primary Assembly 141321 na Pseudomonas_CCM7891_cont12_140220nt_UniDepth1.01x unplaced-scaffold na na WLYI01000012.1 = NZ_WLYI01000012.1 Primary Assembly 140220 na Pseudomonas_CCM7891_cont13_139312nt_UniDepth0.97x unplaced-scaffold na na WLYI01000013.1 = NZ_WLYI01000013.1 Primary Assembly 139312 na Pseudomonas_CCM7891_cont14_133557nt_UniDepth1.03x unplaced-scaffold na na WLYI01000014.1 = NZ_WLYI01000014.1 Primary Assembly 133557 na Pseudomonas_CCM7891_cont15_133015nt_UniDepth0.99x unplaced-scaffold na na WLYI01000015.1 = NZ_WLYI01000015.1 Primary Assembly 133015 na Pseudomonas_CCM7891_cont16_126121nt_UniDepth0.98x unplaced-scaffold na na WLYI01000016.1 = NZ_WLYI01000016.1 Primary Assembly 126121 na Pseudomonas_CCM7891_cont17_124659nt_UniDepth0.98x unplaced-scaffold na na WLYI01000017.1 = NZ_WLYI01000017.1 Primary Assembly 124659 na Pseudomonas_CCM7891_cont18_124568nt_UniDepth0.99x unplaced-scaffold na na WLYI01000018.1 = NZ_WLYI01000018.1 Primary Assembly 124568 na Pseudomonas_CCM7891_cont19_123016nt_UniDepth0.97x unplaced-scaffold na na WLYI01000019.1 = NZ_WLYI01000019.1 Primary Assembly 123016 na Pseudomonas_CCM7891_cont20_121568nt_UniDepth0.99x unplaced-scaffold na na WLYI01000020.1 = NZ_WLYI01000020.1 Primary Assembly 121568 na Pseudomonas_CCM7891_cont21_117750nt_UniDepth1.02x unplaced-scaffold na na WLYI01000021.1 = NZ_WLYI01000021.1 Primary Assembly 117750 na Pseudomonas_CCM7891_cont22_111722nt_UniDepth1.00x unplaced-scaffold na na WLYI01000022.1 = NZ_WLYI01000022.1 Primary Assembly 111722 na Pseudomonas_CCM7891_cont23_108643nt_UniDepth1.04x unplaced-scaffold na na WLYI01000023.1 = NZ_WLYI01000023.1 Primary Assembly 108643 na Pseudomonas_CCM7891_cont24_104655nt_UniDepth1.02x unplaced-scaffold na na WLYI01000024.1 = NZ_WLYI01000024.1 Primary Assembly 104655 na Pseudomonas_CCM7891_cont25_99264nt_UniDepth1.05x unplaced-scaffold na na WLYI01000025.1 = NZ_WLYI01000025.1 Primary Assembly 99264 na Pseudomonas_CCM7891_cont26_98415nt_UniDepth1.02x unplaced-scaffold na na WLYI01000026.1 = NZ_WLYI01000026.1 Primary Assembly 98415 na Pseudomonas_CCM7891_cont27_94729nt_UniDepth1.00x unplaced-scaffold na na WLYI01000027.1 = NZ_WLYI01000027.1 Primary Assembly 94729 na Pseudomonas_CCM7891_cont28_91293nt_UniDepth0.98x unplaced-scaffold na na WLYI01000028.1 = NZ_WLYI01000028.1 Primary Assembly 91293 na Pseudomonas_CCM7891_cont29_87577nt_UniDepth0.96x unplaced-scaffold na na WLYI01000029.1 = NZ_WLYI01000029.1 Primary Assembly 87577 na Pseudomonas_CCM7891_cont30_87464nt_UniDepth0.98x unplaced-scaffold na na WLYI01000030.1 = NZ_WLYI01000030.1 Primary Assembly 87464 na Pseudomonas_CCM7891_cont31_87334nt_UniDepth1.01x unplaced-scaffold na na WLYI01000031.1 = NZ_WLYI01000031.1 Primary Assembly 87334 na Pseudomonas_CCM7891_cont32_86705nt_UniDepth0.99x unplaced-scaffold na na WLYI01000032.1 = NZ_WLYI01000032.1 Primary Assembly 86705 na Pseudomonas_CCM7891_cont33_76401nt_UniDepth1.03x unplaced-scaffold na na WLYI01000033.1 = NZ_WLYI01000033.1 Primary Assembly 76401 na Pseudomonas_CCM7891_cont34_61664nt_UniDepth1.00x unplaced-scaffold na na WLYI01000034.1 = NZ_WLYI01000034.1 Primary Assembly 61664 na Pseudomonas_CCM7891_cont35_53977nt_UniDepth1.02x unplaced-scaffold na na WLYI01000035.1 = NZ_WLYI01000035.1 Primary Assembly 53977 na Pseudomonas_CCM7891_cont36_50000nt_UniDepth1.02x unplaced-scaffold na na WLYI01000036.1 = NZ_WLYI01000036.1 Primary Assembly 50000 na Pseudomonas_CCM7891_cont37_47176nt_UniDepth1.01x unplaced-scaffold na na WLYI01000037.1 = NZ_WLYI01000037.1 Primary Assembly 47176 na Pseudomonas_CCM7891_cont38_46620nt_UniDepth1.00x unplaced-scaffold na na WLYI01000038.1 = NZ_WLYI01000038.1 Primary Assembly 46620 na Pseudomonas_CCM7891_cont39_46346nt_UniDepth1.00x unplaced-scaffold na na WLYI01000039.1 = NZ_WLYI01000039.1 Primary Assembly 46346 na Pseudomonas_CCM7891_cont40_43313nt_UniDepth1.04x unplaced-scaffold na na WLYI01000040.1 = NZ_WLYI01000040.1 Primary Assembly 43313 na Pseudomonas_CCM7891_cont41_43064nt_UniDepth1.02x unplaced-scaffold na na WLYI01000041.1 = NZ_WLYI01000041.1 Primary Assembly 43064 na Pseudomonas_CCM7891_cont42_41053nt_UniDepth1.00x unplaced-scaffold na na WLYI01000042.1 = NZ_WLYI01000042.1 Primary Assembly 41053 na Pseudomonas_CCM7891_cont43_38961nt_UniDepth0.99x unplaced-scaffold na na WLYI01000043.1 = NZ_WLYI01000043.1 Primary Assembly 38961 na Pseudomonas_CCM7891_cont44_37967nt_UniDepth1.05x unplaced-scaffold na na WLYI01000044.1 = NZ_WLYI01000044.1 Primary Assembly 37967 na Pseudomonas_CCM7891_cont45_37851nt_UniDepth0.97x unplaced-scaffold na na WLYI01000045.1 = NZ_WLYI01000045.1 Primary Assembly 37851 na Pseudomonas_CCM7891_cont46_36869nt_UniDepth0.96x unplaced-scaffold na na WLYI01000046.1 = NZ_WLYI01000046.1 Primary Assembly 36869 na Pseudomonas_CCM7891_cont47_35836nt_UniDepth0.96x unplaced-scaffold na na WLYI01000047.1 = NZ_WLYI01000047.1 Primary Assembly 35836 na Pseudomonas_CCM7891_cont48_31361nt_UniDepth1.00x unplaced-scaffold na na WLYI01000048.1 = NZ_WLYI01000048.1 Primary Assembly 31361 na Pseudomonas_CCM7891_cont49_31183nt_UniDepth1.00x unplaced-scaffold na na WLYI01000049.1 = NZ_WLYI01000049.1 Primary Assembly 31183 na Pseudomonas_CCM7891_cont50_28066nt_UniDepth0.98x unplaced-scaffold na na WLYI01000050.1 = NZ_WLYI01000050.1 Primary Assembly 28066 na Pseudomonas_CCM7891_cont51_26295nt_UniDepth1.04x unplaced-scaffold na na WLYI01000051.1 = NZ_WLYI01000051.1 Primary Assembly 26295 na Pseudomonas_CCM7891_cont52_25143nt_UniDepth1.03x unplaced-scaffold na na WLYI01000052.1 = NZ_WLYI01000052.1 Primary Assembly 25143 na Pseudomonas_CCM7891_cont53_23822nt_UniDepth0.99x unplaced-scaffold na na WLYI01000053.1 = NZ_WLYI01000053.1 Primary Assembly 23822 na Pseudomonas_CCM7891_cont54_23579nt_UniDepth0.93x unplaced-scaffold na na WLYI01000054.1 = NZ_WLYI01000054.1 Primary Assembly 23579 na Pseudomonas_CCM7891_cont55_22255nt_UniDepth1.10x unplaced-scaffold na na WLYI01000055.1 = NZ_WLYI01000055.1 Primary Assembly 22255 na Pseudomonas_CCM7891_cont56_20359nt_UniDepth0.93x unplaced-scaffold na na WLYI01000056.1 = NZ_WLYI01000056.1 Primary Assembly 20359 na Pseudomonas_CCM7891_cont57_19215nt_UniDepth1.03x unplaced-scaffold na na WLYI01000057.1 = NZ_WLYI01000057.1 Primary Assembly 19215 na Pseudomonas_CCM7891_cont58_17740nt_UniDepth1.01x unplaced-scaffold na na WLYI01000058.1 = NZ_WLYI01000058.1 Primary Assembly 17740 na Pseudomonas_CCM7891_cont59_16933nt_UniDepth1.09x unplaced-scaffold na na WLYI01000059.1 = NZ_WLYI01000059.1 Primary Assembly 16933 na Pseudomonas_CCM7891_cont60_14506nt_UniDepth0.95x unplaced-scaffold na na WLYI01000060.1 = NZ_WLYI01000060.1 Primary Assembly 14506 na Pseudomonas_CCM7891_cont61_14259nt_UniDepth0.94x unplaced-scaffold na na WLYI01000061.1 = NZ_WLYI01000061.1 Primary Assembly 14259 na Pseudomonas_CCM7891_cont62_10378nt_UniDepth1.02x unplaced-scaffold na na WLYI01000062.1 = NZ_WLYI01000062.1 Primary Assembly 10378 na Pseudomonas_CCM7891_cont63_9570nt_UniDepth0.98x unplaced-scaffold na na WLYI01000063.1 = NZ_WLYI01000063.1 Primary Assembly 9570 na Pseudomonas_CCM7891_cont64_9323nt_UniDepth0.95x unplaced-scaffold na na WLYI01000064.1 = NZ_WLYI01000064.1 Primary Assembly 9323 na Pseudomonas_CCM7891_cont65_8357nt_UniDepth0.84x unplaced-scaffold na na WLYI01000065.1 = NZ_WLYI01000065.1 Primary Assembly 8357 na Pseudomonas_CCM7891_cont66_7359nt_UniDepth1.05x unplaced-scaffold na na WLYI01000066.1 = NZ_WLYI01000066.1 Primary Assembly 7359 na Pseudomonas_CCM7891_cont67_6545nt_UniDepth1.03x unplaced-scaffold na na WLYI01000067.1 = NZ_WLYI01000067.1 Primary Assembly 6545 na Pseudomonas_CCM7891_cont68_5469nt_UniDepth6.76x unplaced-scaffold na na WLYI01000068.1 = NZ_WLYI01000068.1 Primary Assembly 5469 na Pseudomonas_CCM7891_cont69_3309nt_UniDepth1.02x unplaced-scaffold na na WLYI01000069.1 = NZ_WLYI01000069.1 Primary Assembly 3309 na Pseudomonas_CCM7891_cont70_2583nt_UniDepth2.22x unplaced-scaffold na na WLYI01000070.1 = NZ_WLYI01000070.1 Primary Assembly 2583 na Pseudomonas_CCM7891_cont71_1941nt_UniDepth1.02x unplaced-scaffold na na WLYI01000071.1 = NZ_WLYI01000071.1 Primary Assembly 1941 na Pseudomonas_CCM7891_cont72_1808nt_UniDepth1.79x unplaced-scaffold na na WLYI01000072.1 = NZ_WLYI01000072.1 Primary Assembly 1808 na Pseudomonas_CCM7891_cont73_1759nt_UniDepth1.97x unplaced-scaffold na na WLYI01000073.1 = NZ_WLYI01000073.1 Primary Assembly 1759 na Pseudomonas_CCM7891_cont74_1466nt_UniDepth1.06x unplaced-scaffold na na WLYI01000074.1 = NZ_WLYI01000074.1 Primary Assembly 1466 na Pseudomonas_CCM7891_cont75_1448nt_UniDepth1.78x unplaced-scaffold na na WLYI01000075.1 = NZ_WLYI01000075.1 Primary Assembly 1448 na Pseudomonas_CCM7891_cont76_1444nt_UniDepth0.87x unplaced-scaffold na na WLYI01000076.1 = NZ_WLYI01000076.1 Primary Assembly 1444 na Pseudomonas_CCM7891_cont77_1441nt_UniDepth0.82x unplaced-scaffold na na WLYI01000077.1 = NZ_WLYI01000077.1 Primary Assembly 1441 na Pseudomonas_CCM7891_cont78_1242nt_UniDepth1.10x unplaced-scaffold na na WLYI01000078.1 = NZ_WLYI01000078.1 Primary Assembly 1242 na Pseudomonas_CCM7891_cont79_1226nt_UniDepth2.39x unplaced-scaffold na na WLYI01000079.1 = NZ_WLYI01000079.1 Primary Assembly 1226 na Pseudomonas_CCM7891_cont80_1219nt_UniDepth2.21x unplaced-scaffold na na WLYI01000080.1 = NZ_WLYI01000080.1 Primary Assembly 1219 na Pseudomonas_CCM7891_cont81_1197nt_UniDepth4.84x unplaced-scaffold na na WLYI01000081.1 = NZ_WLYI01000081.1 Primary Assembly 1197 na Pseudomonas_CCM7891_cont82_1173nt_UniDepth1.78x unplaced-scaffold na na WLYI01000082.1 = NZ_WLYI01000082.1 Primary Assembly 1173 na Pseudomonas_CCM7891_cont83_1049nt_UniDepth0.85x unplaced-scaffold na na WLYI01000083.1 = NZ_WLYI01000083.1 Primary Assembly 1049 na Pseudomonas_CCM7891_cont84_1040nt_UniDepth1.92x unplaced-scaffold na na WLYI01000084.1 = NZ_WLYI01000084.1 Primary Assembly 1040 na Pseudomonas_CCM7891_cont85_1033nt_UniDepth0.90x unplaced-scaffold na na WLYI01000085.1 = NZ_WLYI01000085.1 Primary Assembly 1033 na Pseudomonas_CCM7891_cont86_856nt_UniDepth0.58x unplaced-scaffold na na WLYI01000086.1 = NZ_WLYI01000086.1 Primary Assembly 856 na Pseudomonas_CCM7891_cont87_828nt_UniDepth0.88x unplaced-scaffold na na WLYI01000087.1 = NZ_WLYI01000087.1 Primary Assembly 828 na Pseudomonas_CCM7891_cont88_828nt_UniDepth3.18x unplaced-scaffold na na WLYI01000088.1 = NZ_WLYI01000088.1 Primary Assembly 828 na Pseudomonas_CCM7891_cont89_749nt_UniDepth0.95x unplaced-scaffold na na WLYI01000089.1 = NZ_WLYI01000089.1 Primary Assembly 749 na Pseudomonas_CCM7891_cont90_508nt_UniDepth1.10x unplaced-scaffold na na WLYI01000090.1 = NZ_WLYI01000090.1 Primary Assembly 508 na Pseudomonas_CCM7891_cont91_505nt_UniDepth0.87x unplaced-scaffold na na WLYI01000091.1 = NZ_WLYI01000091.1 Primary Assembly 505 na Pseudomonas_CCM7891_cont92_477nt_UniDepth0.73x unplaced-scaffold na na WLYI01000092.1 = NZ_WLYI01000092.1 Primary Assembly 477 na Pseudomonas_CCM7891_cont93_476nt_UniDepth0.41x unplaced-scaffold na na WLYI01000093.1 = NZ_WLYI01000093.1 Primary Assembly 476 na Pseudomonas_CCM7891_cont94_449nt_UniDepth2.94x unplaced-scaffold na na WLYI01000094.1 = NZ_WLYI01000094.1 Primary Assembly 449 na Pseudomonas_CCM7891_cont95_432nt_UniDepth2.25x unplaced-scaffold na na WLYI01000095.1 = NZ_WLYI01000095.1 Primary Assembly 432 na Pseudomonas_CCM7891_cont96_424nt_UniDepth1.15x unplaced-scaffold na na WLYI01000096.1 = NZ_WLYI01000096.1 Primary Assembly 424 na Pseudomonas_CCM7891_cont97_415nt_UniDepth0.88x unplaced-scaffold na na WLYI01000097.1 = NZ_WLYI01000097.1 Primary Assembly 415 na Pseudomonas_CCM7891_cont98_371nt_UniDepth1.21x unplaced-scaffold na na WLYI01000098.1 = NZ_WLYI01000098.1 Primary Assembly 371 na Pseudomonas_CCM7891_cont99_369nt_UniDepth0.68x unplaced-scaffold na na WLYI01000099.1 = NZ_WLYI01000099.1 Primary Assembly 369 na Pseudomonas_CCM7891_cont100_369nt_UniDepth1.25x unplaced-scaffold na na WLYI01000100.1 = NZ_WLYI01000100.1 Primary Assembly 369 na Pseudomonas_CCM7891_cont101_334nt_UniDepth1.07x unplaced-scaffold na na WLYI01000101.1 = NZ_WLYI01000101.1 Primary Assembly 334 na Pseudomonas_CCM7891_cont102_304nt_UniDepth1.93x unplaced-scaffold na na WLYI01000102.1 = NZ_WLYI01000102.1 Primary Assembly 304 na Pseudomonas_CCM7891_cont103_297nt_UniDepth0.76x unplaced-scaffold na na WLYI01000103.1 = NZ_WLYI01000103.1 Primary Assembly 297 na Pseudomonas_CCM7891_cont104_288nt_UniDepth0.62x unplaced-scaffold na na WLYI01000104.1 = NZ_WLYI01000104.1 Primary Assembly 288 na Pseudomonas_CCM7891_cont105_271nt_UniDepth0.96x unplaced-scaffold na na WLYI01000105.1 = NZ_WLYI01000105.1 Primary Assembly 271 na Pseudomonas_CCM7891_cont106_267nt_UniDepth1.71x unplaced-scaffold na na WLYI01000106.1 = NZ_WLYI01000106.1 Primary Assembly 267 na Pseudomonas_CCM7891_cont107_255nt_UniDepth2.27x unplaced-scaffold na na WLYI01000107.1 = NZ_WLYI01000107.1 Primary Assembly 255 na Pseudomonas_CCM7891_cont108_255nt_UniDepth0.50x unplaced-scaffold na na WLYI01000108.1 = NZ_WLYI01000108.1 Primary Assembly 255 na Pseudomonas_CCM7891_cont109_252nt_UniDepth2.28x unplaced-scaffold na na WLYI01000109.1 = NZ_WLYI01000109.1 Primary Assembly 252 na Pseudomonas_CCM7891_cont110_247nt_UniDepth1.01x unplaced-scaffold na na WLYI01000110.1 = NZ_WLYI01000110.1 Primary Assembly 247 na Pseudomonas_CCM7891_cont111_229nt_UniDepth1.78x unplaced-scaffold na na WLYI01000111.1 = NZ_WLYI01000111.1 Primary Assembly 229 na Pseudomonas_CCM7891_cont112_223nt_UniDepth0.86x unplaced-scaffold na na WLYI01000112.1 = NZ_WLYI01000112.1 Primary Assembly 223 na Pseudomonas_CCM7891_cont113_221nt_UniDepth3.20x unplaced-scaffold na na WLYI01000113.1 = NZ_WLYI01000113.1 Primary Assembly 221 na Pseudomonas_CCM7891_cont114_205nt_UniDepth0.82x unplaced-scaffold na na WLYI01000114.1 = NZ_WLYI01000114.1 Primary Assembly 205 na