# Assembly name: ASM972424v1 # Organism name: Pseudomonas spelaei (g-proteobacteria) # Infraspecific name: strain=CCM 7893 # Taxid: 1055469 # BioSample: SAMN13241946 # BioProject: PRJNA587868 # Submitter: Masaryk University # Date: 2019-12-01 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: WNNK01 # Assembly method: Unicycler v. v0.4.8-beta # Expected final version: yes # Genome coverage: 96.0x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_009724245.1 # RefSeq assembly accession: GCF_009724245.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_009724255.1 GCF_009724255.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Pseudomonas_CCM7893_cont1_459757nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000001.1 = NZ_WNNK01000001.1 Primary Assembly 459757 na Pseudomonas_CCM7893_cont2_445375nt_UniDepth_1.01x unplaced-scaffold na na WNNK01000002.1 = NZ_WNNK01000002.1 Primary Assembly 445375 na Pseudomonas_CCM7893_cont3_397435nt_UniDepth_0.98x unplaced-scaffold na na WNNK01000003.1 = NZ_WNNK01000003.1 Primary Assembly 397435 na Pseudomonas_CCM7893_cont4_341684nt_UniDepth_1.03x unplaced-scaffold na na WNNK01000004.1 = NZ_WNNK01000004.1 Primary Assembly 341684 na Pseudomonas_CCM7893_cont5_331854nt_UniDepth_0.97x unplaced-scaffold na na WNNK01000005.1 = NZ_WNNK01000005.1 Primary Assembly 331854 na Pseudomonas_CCM7893_cont6_280674nt_UniDepth_1.01x unplaced-scaffold na na WNNK01000006.1 = NZ_WNNK01000006.1 Primary Assembly 280674 na Pseudomonas_CCM7893_cont7_280021nt_UniDepth_0.99x unplaced-scaffold na na WNNK01000007.1 = NZ_WNNK01000007.1 Primary Assembly 280021 na Pseudomonas_CCM7893_cont8_231226nt_UniDepth_0.99x unplaced-scaffold na na WNNK01000008.1 = NZ_WNNK01000008.1 Primary Assembly 231226 na Pseudomonas_CCM7893_cont9_228763nt_UniDepth_1.01x unplaced-scaffold na na WNNK01000009.1 = NZ_WNNK01000009.1 Primary Assembly 228763 na Pseudomonas_CCM7893_cont10_216379nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000010.1 = NZ_WNNK01000010.1 Primary Assembly 216379 na Pseudomonas_CCM7893_cont11_200812nt_UniDepth_0.97x unplaced-scaffold na na WNNK01000011.1 = NZ_WNNK01000011.1 Primary Assembly 200812 na Pseudomonas_CCM7893_cont12_195751nt_UniDepth_1.01x unplaced-scaffold na na WNNK01000012.1 = NZ_WNNK01000012.1 Primary Assembly 195751 na Pseudomonas_CCM7893_cont13_195717nt_UniDepth_1.02x unplaced-scaffold na na WNNK01000013.1 = NZ_WNNK01000013.1 Primary Assembly 195717 na Pseudomonas_CCM7893_cont14_181832nt_UniDepth_0.96x unplaced-scaffold na na WNNK01000014.1 = NZ_WNNK01000014.1 Primary Assembly 181832 na Pseudomonas_CCM7893_cont15_173624nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000015.1 = NZ_WNNK01000015.1 Primary Assembly 173624 na Pseudomonas_CCM7893_cont16_160453nt_UniDepth_0.97x unplaced-scaffold na na WNNK01000016.1 = NZ_WNNK01000016.1 Primary Assembly 160453 na Pseudomonas_CCM7893_cont17_148998nt_UniDepth_1.02x unplaced-scaffold na na WNNK01000017.1 = NZ_WNNK01000017.1 Primary Assembly 148998 na Pseudomonas_CCM7893_cont18_138328nt_UniDepth_0.99x unplaced-scaffold na na WNNK01000018.1 = NZ_WNNK01000018.1 Primary Assembly 138328 na Pseudomonas_CCM7893_cont19_136933nt_UniDepth_0.96x unplaced-scaffold na na WNNK01000019.1 = NZ_WNNK01000019.1 Primary Assembly 136933 na Pseudomonas_CCM7893_cont20_133098nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000020.1 = NZ_WNNK01000020.1 Primary Assembly 133098 na Pseudomonas_CCM7893_cont21_131808nt_UniDepth_0.95x unplaced-scaffold na na WNNK01000021.1 = NZ_WNNK01000021.1 Primary Assembly 131808 na Pseudomonas_CCM7893_cont22_124798nt_UniDepth_0.98x unplaced-scaffold na na WNNK01000022.1 = NZ_WNNK01000022.1 Primary Assembly 124798 na Pseudomonas_CCM7893_cont23_112440nt_UniDepth_0.97x unplaced-scaffold na na WNNK01000023.1 = NZ_WNNK01000023.1 Primary Assembly 112440 na Pseudomonas_CCM7893_cont24_90622nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000024.1 = NZ_WNNK01000024.1 Primary Assembly 90622 na Pseudomonas_CCM7893_cont25_87060nt_UniDepth_1.04x unplaced-scaffold na na WNNK01000025.1 = NZ_WNNK01000025.1 Primary Assembly 87060 na Pseudomonas_CCM7893_cont26_81443nt_UniDepth_0.99x unplaced-scaffold na na WNNK01000026.1 = NZ_WNNK01000026.1 Primary Assembly 81443 na Pseudomonas_CCM7893_cont27_75763nt_UniDepth_1.02x unplaced-scaffold na na WNNK01000027.1 = NZ_WNNK01000027.1 Primary Assembly 75763 na Pseudomonas_CCM7893_cont28_66955nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000028.1 = NZ_WNNK01000028.1 Primary Assembly 66955 na Pseudomonas_CCM7893_cont29_65331nt_UniDepth_0.99x unplaced-scaffold na na WNNK01000029.1 = NZ_WNNK01000029.1 Primary Assembly 65331 na Pseudomonas_CCM7893_cont30_61652nt_UniDepth_0.96x unplaced-scaffold na na WNNK01000030.1 = NZ_WNNK01000030.1 Primary Assembly 61652 na Pseudomonas_CCM7893_cont31_48411nt_UniDepth_0.93x unplaced-scaffold na na WNNK01000031.1 = NZ_WNNK01000031.1 Primary Assembly 48411 na Pseudomonas_CCM7893_cont32_48183nt_UniDepth_1.04x unplaced-scaffold na na WNNK01000032.1 = NZ_WNNK01000032.1 Primary Assembly 48183 na Pseudomonas_CCM7893_cont33_46927nt_UniDepth_0.99x unplaced-scaffold na na WNNK01000033.1 = NZ_WNNK01000033.1 Primary Assembly 46927 na Pseudomonas_CCM7893_cont34_44943nt_UniDepth_1.03x unplaced-scaffold na na WNNK01000034.1 = NZ_WNNK01000034.1 Primary Assembly 44943 na Pseudomonas_CCM7893_cont35_44919nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000035.1 = NZ_WNNK01000035.1 Primary Assembly 44919 na Pseudomonas_CCM7893_cont36_43194nt_UniDepth_0.97x unplaced-scaffold na na WNNK01000036.1 = NZ_WNNK01000036.1 Primary Assembly 43194 na Pseudomonas_CCM7893_cont37_41936nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000037.1 = NZ_WNNK01000037.1 Primary Assembly 41936 na Pseudomonas_CCM7893_cont38_41223nt_UniDepth_0.94x unplaced-scaffold na na WNNK01000038.1 = NZ_WNNK01000038.1 Primary Assembly 41223 na Pseudomonas_CCM7893_cont39_41043nt_UniDepth_0.93x unplaced-scaffold na na WNNK01000039.1 = NZ_WNNK01000039.1 Primary Assembly 41043 na Pseudomonas_CCM7893_cont40_38373nt_UniDepth_0.96x unplaced-scaffold na na WNNK01000040.1 = NZ_WNNK01000040.1 Primary Assembly 38373 na Pseudomonas_CCM7893_cont41_36444nt_UniDepth_0.97x unplaced-scaffold na na WNNK01000041.1 = NZ_WNNK01000041.1 Primary Assembly 36444 na Pseudomonas_CCM7893_cont42_33463nt_UniDepth_0.99x unplaced-scaffold na na WNNK01000042.1 = NZ_WNNK01000042.1 Primary Assembly 33463 na Pseudomonas_CCM7893_cont43_32367nt_UniDepth_0.93x unplaced-scaffold na na WNNK01000043.1 = NZ_WNNK01000043.1 Primary Assembly 32367 na Pseudomonas_CCM7893_cont44_24645nt_UniDepth_1.04x unplaced-scaffold na na WNNK01000044.1 = NZ_WNNK01000044.1 Primary Assembly 24645 na Pseudomonas_CCM7893_cont45_21725nt_UniDepth_1.03x unplaced-scaffold na na WNNK01000045.1 = NZ_WNNK01000045.1 Primary Assembly 21725 na Pseudomonas_CCM7893_cont46_21486nt_UniDepth_0.97x unplaced-scaffold na na WNNK01000046.1 = NZ_WNNK01000046.1 Primary Assembly 21486 na Pseudomonas_CCM7893_cont47_19000nt_UniDepth_1.07x unplaced-scaffold na na WNNK01000047.1 = NZ_WNNK01000047.1 Primary Assembly 19000 na Pseudomonas_CCM7893_cont48_17158nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000048.1 = NZ_WNNK01000048.1 Primary Assembly 17158 na Pseudomonas_CCM7893_cont49_15886nt_UniDepth_0.99x unplaced-scaffold na na WNNK01000049.1 = NZ_WNNK01000049.1 Primary Assembly 15886 na Pseudomonas_CCM7893_cont50_14986nt_UniDepth_0.89x unplaced-scaffold na na WNNK01000050.1 = NZ_WNNK01000050.1 Primary Assembly 14986 na Pseudomonas_CCM7893_cont51_14141nt_UniDepth_1.01x unplaced-scaffold na na WNNK01000051.1 = NZ_WNNK01000051.1 Primary Assembly 14141 na Pseudomonas_CCM7893_cont52_13746nt_UniDepth_0.90x unplaced-scaffold na na WNNK01000052.1 = NZ_WNNK01000052.1 Primary Assembly 13746 na Pseudomonas_CCM7893_cont53_12891nt_UniDepth_0.91x unplaced-scaffold na na WNNK01000053.1 = NZ_WNNK01000053.1 Primary Assembly 12891 na Pseudomonas_CCM7893_cont54_10241nt_UniDepth_0.96x unplaced-scaffold na na WNNK01000054.1 = NZ_WNNK01000054.1 Primary Assembly 10241 na Pseudomonas_CCM7893_cont55_9736nt_UniDepth_1.08x unplaced-scaffold na na WNNK01000055.1 = NZ_WNNK01000055.1 Primary Assembly 9736 na Pseudomonas_CCM7893_cont56_9661nt_UniDepth_0.88x unplaced-scaffold na na WNNK01000056.1 = NZ_WNNK01000056.1 Primary Assembly 9661 na Pseudomonas_CCM7893_cont57_5646nt_UniDepth_6.58x unplaced-scaffold na na WNNK01000057.1 = NZ_WNNK01000057.1 Primary Assembly 5646 na Pseudomonas_CCM7893_cont58_3031nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000058.1 = NZ_WNNK01000058.1 Primary Assembly 3031 na Pseudomonas_CCM7893_cont59_2485nt_UniDepth_0.98x unplaced-scaffold na na WNNK01000059.1 = NZ_WNNK01000059.1 Primary Assembly 2485 na Pseudomonas_CCM7893_cont60_2116nt_UniDepth_1.27x unplaced-scaffold na na WNNK01000060.1 = NZ_WNNK01000060.1 Primary Assembly 2116 na Pseudomonas_CCM7893_cont61_2110nt_UniDepth_2.30x unplaced-scaffold na na WNNK01000061.1 = NZ_WNNK01000061.1 Primary Assembly 2110 na Pseudomonas_CCM7893_cont62_1922nt_UniDepth_2.20x unplaced-scaffold na na WNNK01000062.1 = NZ_WNNK01000062.1 Primary Assembly 1922 na Pseudomonas_CCM7893_cont63_1609nt_UniDepth_1.09x unplaced-scaffold na na WNNK01000063.1 = NZ_WNNK01000063.1 Primary Assembly 1609 na Pseudomonas_CCM7893_cont64_1601nt_UniDepth_1.14x unplaced-scaffold na na WNNK01000064.1 = NZ_WNNK01000064.1 Primary Assembly 1601 na Pseudomonas_CCM7893_cont65_1512nt_UniDepth_7.40x unplaced-scaffold na na WNNK01000065.1 = NZ_WNNK01000065.1 Primary Assembly 1512 na Pseudomonas_CCM7893_cont66_1350nt_UniDepth_1.11x unplaced-scaffold na na WNNK01000066.1 = NZ_WNNK01000066.1 Primary Assembly 1350 na Pseudomonas_CCM7893_cont67_1310nt_UniDepth_7.95x unplaced-scaffold na na WNNK01000067.1 = NZ_WNNK01000067.1 Primary Assembly 1310 na Pseudomonas_CCM7893_cont68_1234nt_UniDepth_1.64x unplaced-scaffold na na WNNK01000068.1 = NZ_WNNK01000068.1 Primary Assembly 1234 na Pseudomonas_CCM7893_cont69_1210nt_UniDepth_0.77x unplaced-scaffold na na WNNK01000069.1 = NZ_WNNK01000069.1 Primary Assembly 1210 na Pseudomonas_CCM7893_cont70_1210nt_UniDepth_0.79x unplaced-scaffold na na WNNK01000070.1 = NZ_WNNK01000070.1 Primary Assembly 1210 na Pseudomonas_CCM7893_cont71_1102nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000071.1 = NZ_WNNK01000071.1 Primary Assembly 1102 na Pseudomonas_CCM7893_cont72_915nt_UniDepth_1.86x unplaced-scaffold na na WNNK01000072.1 = NZ_WNNK01000072.1 Primary Assembly 915 na Pseudomonas_CCM7893_cont73_845nt_UniDepth_1.12x unplaced-scaffold na na WNNK01000073.1 = NZ_WNNK01000073.1 Primary Assembly 845 na Pseudomonas_CCM7893_cont74_710nt_UniDepth_1.78x unplaced-scaffold na na WNNK01000074.1 = NZ_WNNK01000074.1 Primary Assembly 710 na Pseudomonas_CCM7893_cont75_639nt_UniDepth_1.07x unplaced-scaffold na na WNNK01000075.1 = NZ_WNNK01000075.1 Primary Assembly 639 na Pseudomonas_CCM7893_cont76_639nt_UniDepth_1.18x unplaced-scaffold na na WNNK01000076.1 = NZ_WNNK01000076.1 Primary Assembly 639 na Pseudomonas_CCM7893_cont77_625nt_UniDepth_0.97x unplaced-scaffold na na WNNK01000077.1 = NZ_WNNK01000077.1 Primary Assembly 625 na Pseudomonas_CCM7893_cont78_625nt_UniDepth_1.21x unplaced-scaffold na na WNNK01000078.1 = NZ_WNNK01000078.1 Primary Assembly 625 na Pseudomonas_CCM7893_cont79_540nt_UniDepth_1.72x unplaced-scaffold na na WNNK01000079.1 = NZ_WNNK01000079.1 Primary Assembly 540 na Pseudomonas_CCM7893_cont80_538nt_UniDepth_1.51x unplaced-scaffold na na WNNK01000080.1 = NZ_WNNK01000080.1 Primary Assembly 538 na Pseudomonas_CCM7893_cont81_523nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000081.1 = NZ_WNNK01000081.1 Primary Assembly 523 na Pseudomonas_CCM7893_cont82_517nt_UniDepth_1.09x unplaced-scaffold na na WNNK01000082.1 = NZ_WNNK01000082.1 Primary Assembly 517 na Pseudomonas_CCM7893_cont83_508nt_UniDepth_2.19x unplaced-scaffold na na WNNK01000083.1 = NZ_WNNK01000083.1 Primary Assembly 508 na Pseudomonas_CCM7893_cont84_460nt_UniDepth_1.04x unplaced-scaffold na na WNNK01000084.1 = NZ_WNNK01000084.1 Primary Assembly 460 na Pseudomonas_CCM7893_cont85_447nt_UniDepth_1.07x unplaced-scaffold na na WNNK01000085.1 = NZ_WNNK01000085.1 Primary Assembly 447 na Pseudomonas_CCM7893_cont86_447nt_UniDepth_0.96x unplaced-scaffold na na WNNK01000086.1 = NZ_WNNK01000086.1 Primary Assembly 447 na Pseudomonas_CCM7893_cont87_431nt_UniDepth_1.92x unplaced-scaffold na na WNNK01000087.1 = NZ_WNNK01000087.1 Primary Assembly 431 na Pseudomonas_CCM7893_cont88_429nt_UniDepth_0.87x unplaced-scaffold na na WNNK01000088.1 = NZ_WNNK01000088.1 Primary Assembly 429 na Pseudomonas_CCM7893_cont89_425nt_UniDepth_2.62x unplaced-scaffold na na WNNK01000089.1 = NZ_WNNK01000089.1 Primary Assembly 425 na Pseudomonas_CCM7893_cont90_370nt_UniDepth_1.09x unplaced-scaffold na na WNNK01000090.1 = NZ_WNNK01000090.1 Primary Assembly 370 na Pseudomonas_CCM7893_cont91_368nt_UniDepth_1.00x unplaced-scaffold na na WNNK01000091.1 = NZ_WNNK01000091.1 Primary Assembly 368 na Pseudomonas_CCM7893_cont92_356nt_UniDepth_0.58x unplaced-scaffold na na WNNK01000092.1 = NZ_WNNK01000092.1 Primary Assembly 356 na Pseudomonas_CCM7893_cont93_342nt_UniDepth_0.94x unplaced-scaffold na na WNNK01000093.1 = NZ_WNNK01000093.1 Primary Assembly 342 na Pseudomonas_CCM7893_cont94_332nt_UniDepth_1.12x unplaced-scaffold na na WNNK01000094.1 = NZ_WNNK01000094.1 Primary Assembly 332 na Pseudomonas_CCM7893_cont95_332nt_UniDepth_1.28x unplaced-scaffold na na WNNK01000095.1 = NZ_WNNK01000095.1 Primary Assembly 332 na Pseudomonas_CCM7893_cont96_304nt_UniDepth_2.30x unplaced-scaffold na na WNNK01000096.1 = NZ_WNNK01000096.1 Primary Assembly 304 na Pseudomonas_CCM7893_cont97_293nt_UniDepth_0.82x unplaced-scaffold na na WNNK01000097.1 = NZ_WNNK01000097.1 Primary Assembly 293 na