# Assembly name: UCI_Dpse_MV25 # Organism name: Drosophila pseudoobscura (flies) # Infraspecific name: strain=MV2-25 # Sex: female # Taxid: 7237 # BioSample: SAMN13616452 # BioProject: PRJNA596268 # Submitter: University of California, Irvine # Date: 2020-03-03 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: WVEN01 # Assembly method: Canu v. 1.7 # Expected final version: yes # Genome coverage: 280.0x # Sequencing technology: PacBio Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_009870125.2 # RefSeq assembly accession: GCF_009870125.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_009870275.1 GCF_009870275.1 Primary Assembly ## GCA_009870305.2 GCF_009870305.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chr2 assembled-molecule 2 Chromosome CM020868.1 = NC_046679.1 Primary Assembly 32422566 na Chr3 assembled-molecule 3 Chromosome CM020869.1 = NC_046680.1 Primary Assembly 23510042 na Chr4 assembled-molecule 4 Chromosome CM020870.1 = NC_046681.1 Primary Assembly 30706867 na Chr5 assembled-molecule 5 Chromosome CM020871.1 = NC_046682.1 Primary Assembly 1881070 na X assembled-molecule X Chromosome CM020872.1 = NC_046683.1 Primary Assembly 68158638 na Unplacedtig00000002 unplaced-scaffold na na WVEN01000007.1 = NW_022881696.1 Primary Assembly 82927 na Unplacedtig00000007 unplaced-scaffold na na WVEN01000008.1 = NW_022881697.1 Primary Assembly 460729 na Unplacedtig00000018 unplaced-scaffold na na WVEN01000009.1 = NW_022881698.1 Primary Assembly 114244 na Unplacedtig00000044 unplaced-scaffold na na WVEN01000010.1 = NW_022881699.1 Primary Assembly 40347 na Unplacedtig00000050 unplaced-scaffold na na WVEN01000011.1 = NW_022881700.1 Primary Assembly 46457 na Unplacedtig00000051 unplaced-scaffold na na WVEN01000012.1 = NW_022881701.1 Primary Assembly 87335 na Unplacedtig00000052 unplaced-scaffold na na WVEN01000013.1 = NW_022881702.1 Primary Assembly 81596 na Unplacedtig00000055 unplaced-scaffold na na WVEN01000014.1 = NW_022881703.1 Primary Assembly 112890 na Unplacedtig00000057 unplaced-scaffold na na WVEN01000015.1 = NW_022881704.1 Primary Assembly 79628 na Unplacedtig00000058 unplaced-scaffold na na WVEN01000016.1 = NW_022881705.1 Primary Assembly 130757 na Unplacedtig00000064 unplaced-scaffold na na WVEN01000017.1 = NW_022881706.1 Primary Assembly 16863 na Unplacedtig00000071 unplaced-scaffold na na WVEN01000018.1 = NW_022881707.1 Primary Assembly 319238 na Unplacedtig00000072 unplaced-scaffold na na WVEN01000019.1 = NW_022881708.1 Primary Assembly 806708 na Unplacedtig00000076 unplaced-scaffold na na WVEN01000020.1 = NW_022881709.1 Primary Assembly 118085 na Unplacedtig00000077 unplaced-scaffold na na WVEN01000021.1 = NW_022881710.1 Primary Assembly 401457 na Unplacedtig00000081 unplaced-scaffold na na WVEN01000022.1 = NW_022881711.1 Primary Assembly 61596 na Unplacedtig00000085 unplaced-scaffold na na WVEN01000023.1 = NW_022881712.1 Primary Assembly 264556 na Unplacedtig00000089 unplaced-scaffold na na WVEN01000024.1 = NW_022881713.1 Primary Assembly 101004 na Unplacedtig00000090 unplaced-scaffold na na WVEN01000025.1 = NW_022881714.1 Primary Assembly 85906 na Unplacedtig00000092 unplaced-scaffold na na WVEN01000026.1 = NW_022881715.1 Primary Assembly 241509 na Unplacedtig00000097 unplaced-scaffold na na WVEN01000027.1 = NW_022881716.1 Primary Assembly 55907 na Unplacedtig00000102 unplaced-scaffold na na WVEN01000028.1 = NW_022881717.1 Primary Assembly 57275 na Unplacedtig00000122 unplaced-scaffold na na WVEN01000029.1 = NW_022881718.1 Primary Assembly 94035 na Unplacedtig00000125 unplaced-scaffold na na WVEN01000030.1 = NW_022881719.1 Primary Assembly 3964 na Unplacedtig00000127 unplaced-scaffold na na WVEN01000031.1 = NW_022881720.1 Primary Assembly 6095 na Unplacedtig00000129 unplaced-scaffold na na WVEN01000032.1 = NW_022881721.1 Primary Assembly 4649 na Unplacedtig00000131 unplaced-scaffold na na WVEN01000033.1 = NW_022881722.1 Primary Assembly 2864 na Unplacedtig00000133 unplaced-scaffold na na WVEN01000034.1 = NW_022881723.1 Primary Assembly 7162 na Unplacedtig00000135 unplaced-scaffold na na WVEN01000035.1 = NW_022881724.1 Primary Assembly 3211 na Unplacedtig00000138 unplaced-scaffold na na WVEN01000036.1 = NW_022881725.1 Primary Assembly 3891 na Unplacedtig00000151 unplaced-scaffold na na WVEN01000037.1 = NW_022881726.1 Primary Assembly 3404 na Unplacedtig00000153 unplaced-scaffold na na WVEN01000038.1 = NW_022881727.1 Primary Assembly 1979 na Unplacedtig00000158 unplaced-scaffold na na WVEN01000039.1 = NW_022881728.1 Primary Assembly 3958 na Unplacedtig00000848 unplaced-scaffold na na WVEN01000040.1 = NW_022881729.1 Primary Assembly 204008 na Unplacedtig00000851 unplaced-scaffold na na WVEN01000041.1 = NW_022881730.1 Primary Assembly 139783 na Unplacedtig00000852 unplaced-scaffold na na WVEN01000042.1 = NW_022881731.1 Primary Assembly 122710 na Unplacedtig00000853 unplaced-scaffold na na WVEN01000043.1 = NW_022881732.1 Primary Assembly 103992 na Unplacedtig00000854 unplaced-scaffold na na WVEN01000044.1 = NW_022881733.1 Primary Assembly 354467 na Unplacedtig00000855 unplaced-scaffold na na WVEN01000045.1 = NW_022881734.1 Primary Assembly 428893 na Unplacedtig00000857 unplaced-scaffold na na WVEN01000046.1 = NW_022881735.1 Primary Assembly 104203 na Unplacedtig00000858 unplaced-scaffold na na WVEN01000047.1 = NW_022881736.1 Primary Assembly 134729 na Unplacedtig00000860 unplaced-scaffold na na WVEN01000048.1 = NW_022881737.1 Primary Assembly 93842 na Unplacedtig00000861 unplaced-scaffold na na WVEN01000049.1 = NW_022881738.1 Primary Assembly 279765 na Unplacedtig00000863 unplaced-scaffold na na WVEN01000050.1 = NW_022881739.1 Primary Assembly 38819 na Unplacedtig00000864 unplaced-scaffold na na WVEN01000051.1 = NW_022881740.1 Primary Assembly 47904 na Unplacedtig00000865 unplaced-scaffold na na WVEN01000052.1 = NW_022881741.1 Primary Assembly 25075 na Unplacedtig00000866 unplaced-scaffold na na WVEN01000053.1 = NW_022881742.1 Primary Assembly 1533 na Unplacedtig00000867 unplaced-scaffold na na WVEN01000054.1 = NW_022881743.1 Primary Assembly 39719 na Unplacedtig00000868 unplaced-scaffold na na WVEN01000055.1 = NW_022881744.1 Primary Assembly 2908 na Unplacedtig00000869 unplaced-scaffold na na WVEN01000056.1 = NW_022881745.1 Primary Assembly 90301 na Unplacedtig00139555 unplaced-scaffold na na WVEN01000057.1 = NW_022881746.1 Primary Assembly 58799 na Unplacedtig00139557 unplaced-scaffold na na WVEN01000058.1 = NW_022881747.1 Primary Assembly 48128 na Unplacedtig00139558 unplaced-scaffold na na WVEN01000059.1 = NW_022881748.1 Primary Assembly 40881 na Unplacedtig00139559 unplaced-scaffold na na WVEN01000060.1 = NW_022881749.1 Primary Assembly 30447 na Unplacedtig00139560 unplaced-scaffold na na WVEN01000061.1 = NW_022881750.1 Primary Assembly 172412 na Unplacedtig00139561 unplaced-scaffold na na WVEN01000062.1 = NW_022881751.1 Primary Assembly 3778 na Unplacedtig00139562 unplaced-scaffold na na WVEN01000063.1 = NW_022881752.1 Primary Assembly 3752 na Unplacedtig00139564 unplaced-scaffold na na WVEN01000064.1 = NW_022881753.1 Primary Assembly 6054 na Unplacedtig00139565 unplaced-scaffold na na WVEN01000065.1 = NW_022881754.1 Primary Assembly 45809 na Unplacedtig00139566 unplaced-scaffold na na WVEN01000066.1 = NW_022881755.1 Primary Assembly 50475 na Unplacedtig00139567 unplaced-scaffold na na WVEN01000067.1 = NW_022881756.1 Primary Assembly 6037 na Unplacedtig00139569 unplaced-scaffold na na WVEN01000068.1 = NW_022881757.1 Primary Assembly 1117 na Unplacedtig00139570 unplaced-scaffold na na WVEN01000069.1 = NW_022881758.1 Primary Assembly 1987 na Unplacedtig00139571 unplaced-scaffold na na WVEN01000070.1 = NW_022881759.1 Primary Assembly 3115 na mitochondrion_genome assembled-molecule MT Mitochondrion CM020873.2 = NC_046603.1 non-nuclear 16118 na