# Assembly name: ASM1175060v1 # Organism name: Drosophila busckii (flies) # Infraspecific name: strain=San Diego stock center, stock number 13000-0081.31 # Sex: pooled male and female # Taxid: 30019 # BioSample: SAMN13899428 # BioProject: PRJNA450810 # Submitter: Max Planck Institute of Immunobiology and Epigenetics # Date: 2020-03-26 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: DULD01 # Assembly method: SparseAssembler v. 20160205; DBG2OLC v. 20160205; HiCAssembler v. 1 # Expected final version: yes # Genome coverage: 156x Illumina; 20x PacBio; 17x Hi-C # Sequencing technology: Illumina; PacBio RSII; Hi-C (Illumina HiSeq) # RefSeq category: Representative Genome # GenBank assembly accession: GCA_011750605.1 # RefSeq assembly accession: GCF_011750605.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_011750615.1 GCF_011750615.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 2L assembled-molecule 2L Chromosome CM022245.1 = NC_046604.1 Primary Assembly 19111714 na 2R assembled-molecule 2R Chromosome CM022246.1 = NC_046605.1 Primary Assembly 24078396 na 3L assembled-molecule 3L Chromosome CM022247.1 = NC_046606.1 Primary Assembly 20459230 na 3R assembled-molecule 3R Chromosome CM022248.1 = NC_046607.1 Primary Assembly 23496986 na X assembled-molecule X Chromosome CM022249.1 = NC_046608.1 Primary Assembly 22692164 na 4 assembled-molecule 4 Chromosome CM022250.1 = NC_046609.1 Primary Assembly 998951 na Backbone_148 unplaced-scaffold na na DULD01000078.1 = NW_022872682.1 Primary Assembly 8335 na Backbone_155 unplaced-scaffold na na DULD01000063.1 = NW_022872683.1 Primary Assembly 9126 na Backbone_159 unplaced-scaffold na na DULD01000061.1 = NW_022872684.1 Primary Assembly 16582 na Backbone_170 unplaced-scaffold na na DULD01000062.1 = NW_022872685.1 Primary Assembly 34530 na Backbone_181 unplaced-scaffold na na DULD01000065.1 = NW_022872686.1 Primary Assembly 10288 na Backbone_182 unplaced-scaffold na na DULD01000092.1 = NW_022872687.1 Primary Assembly 2921 na Backbone_202 unplaced-scaffold na na DULD01000093.1 = NW_022872688.1 Primary Assembly 17414 na Backbone_206 unplaced-scaffold na na DULD01000080.1 = NW_022872689.1 Primary Assembly 13633 na Backbone_209 unplaced-scaffold na na DULD01000087.1 = NW_022872690.1 Primary Assembly 2366 na Backbone_212 unplaced-scaffold na na DULD01000075.1 = NW_022872691.1 Primary Assembly 15669 na Backbone_213 unplaced-scaffold na na DULD01000074.1 = NW_022872692.1 Primary Assembly 1576 na Backbone_214 unplaced-scaffold na na DULD01000073.1 = NW_022872693.1 Primary Assembly 3111 na Backbone_215 unplaced-scaffold na na DULD01000072.1 = NW_022872694.1 Primary Assembly 8099 na Backbone_216 unplaced-scaffold na na DULD01000071.1 = NW_022872695.1 Primary Assembly 2001 na Backbone_217 unplaced-scaffold na na DULD01000070.1 = NW_022872696.1 Primary Assembly 9342 na Backbone_220 unplaced-scaffold na na DULD01000091.1 = NW_022872697.1 Primary Assembly 12629 na Backbone_222 unplaced-scaffold na na DULD01000089.1 = NW_022872698.1 Primary Assembly 10735 na Backbone_223 unplaced-scaffold na na DULD01000090.1 = NW_022872699.1 Primary Assembly 11108 na Backbone_225 unplaced-scaffold na na DULD01000094.1 = NW_022872700.1 Primary Assembly 3117 na Backbone_227 unplaced-scaffold na na DULD01000081.1 = NW_022872701.1 Primary Assembly 13552 na Backbone_228 unplaced-scaffold na na DULD01000084.1 = NW_022872702.1 Primary Assembly 19377 na Backbone_229 unplaced-scaffold na na DULD01000085.1 = NW_022872703.1 Primary Assembly 13498 na Backbone_232 unplaced-scaffold na na DULD01000069.1 = NW_022872704.1 Primary Assembly 10511 na Backbone_233 unplaced-scaffold na na DULD01000068.1 = NW_022872705.1 Primary Assembly 8612 na Backbone_235 unplaced-scaffold na na DULD01000064.1 = NW_022872706.1 Primary Assembly 4218 na Backbone_236 unplaced-scaffold na na DULD01000067.1 = NW_022872707.1 Primary Assembly 5352 na Backbone_240 unplaced-scaffold na na DULD01000082.1 = NW_022872708.1 Primary Assembly 651 na Backbone_241 unplaced-scaffold na na DULD01000083.1 = NW_022872709.1 Primary Assembly 7293 na Backbone_242 unplaced-scaffold na na DULD01000079.1 = NW_022872710.1 Primary Assembly 313 na Backbone_243 unplaced-scaffold na na DULD01000060.1 = NW_022872711.1 Primary Assembly 2665 na Backbone_244 unplaced-scaffold na na DULD01000086.1 = NW_022872712.1 Primary Assembly 9739 na Backbone_245 unplaced-scaffold na na DULD01000076.1 = NW_022872713.1 Primary Assembly 16140 na Backbone_247 unplaced-scaffold na na DULD01000088.1 = NW_022872714.1 Primary Assembly 13563 na Backbone_83 unplaced-scaffold na na DULD01000077.1 = NW_022872715.1 Primary Assembly 394 na Backbone_85 unplaced-scaffold na na DULD01000066.1 = NW_022872716.1 Primary Assembly 12494 na chrUn_01 unplaced-scaffold na na DULD01000005.1 = NW_022872717.1 Primary Assembly 961428 na chrUn_02 unplaced-scaffold na na DULD01000007.1 = NW_022872718.1 Primary Assembly 76321 na chrUn_03 unplaced-scaffold na na DULD01000008.1 = NW_022872719.1 Primary Assembly 66710 na chrUn_04 unplaced-scaffold na na DULD01000009.1 = NW_022872720.1 Primary Assembly 174623 na chrUn_05 unplaced-scaffold na na DULD01000010.1 = NW_022872721.1 Primary Assembly 58152 na chrUn_06 unplaced-scaffold na na DULD01000012.1 = NW_022872722.1 Primary Assembly 110796 na chrUn_07 unplaced-scaffold na na DULD01000013.1 = NW_022872723.1 Primary Assembly 2347542 na chrUn_08 unplaced-scaffold na na DULD01000014.1 = NW_022872724.1 Primary Assembly 29564 na hic_scaffold_15 unplaced-scaffold na na DULD01000015.1 = NW_022872725.1 Primary Assembly 64259 na hic_scaffold_16 unplaced-scaffold na na DULD01000016.1 = NW_022872726.1 Primary Assembly 132815 na hic_scaffold_17 unplaced-scaffold na na DULD01000017.1 = NW_022872727.1 Primary Assembly 37264 na hic_scaffold_18 unplaced-scaffold na na DULD01000018.1 = NW_022872728.1 Primary Assembly 11279 na hic_scaffold_19 unplaced-scaffold na na DULD01000019.1 = NW_022872729.1 Primary Assembly 9037 na hic_scaffold_20 unplaced-scaffold na na DULD01000020.1 = NW_022872730.1 Primary Assembly 11117 na hic_scaffold_21 unplaced-scaffold na na DULD01000021.1 = NW_022872731.1 Primary Assembly 15025 na hic_scaffold_22 unplaced-scaffold na na DULD01000022.1 = NW_022872732.1 Primary Assembly 15426 na hic_scaffold_23 unplaced-scaffold na na DULD01000023.1 = NW_022872733.1 Primary Assembly 44362 na hic_scaffold_24 unplaced-scaffold na na DULD01000024.1 = NW_022872734.1 Primary Assembly 36015 na hic_scaffold_25 unplaced-scaffold na na DULD01000025.1 = NW_022872735.1 Primary Assembly 142711 na hic_scaffold_26 unplaced-scaffold na na DULD01000026.1 = NW_022872736.1 Primary Assembly 4954 na hic_scaffold_27 unplaced-scaffold na na DULD01000027.1 = NW_022872737.1 Primary Assembly 46691 na hic_scaffold_28 unplaced-scaffold na na DULD01000028.1 = NW_022872738.1 Primary Assembly 163846 na hic_scaffold_29 unplaced-scaffold na na DULD01000029.1 = NW_022872739.1 Primary Assembly 32032 na hic_scaffold_30 unplaced-scaffold na na DULD01000030.1 = NW_022872740.1 Primary Assembly 26372 na hic_scaffold_31 unplaced-scaffold na na DULD01000031.1 = NW_022872741.1 Primary Assembly 11962 na hic_scaffold_32 unplaced-scaffold na na DULD01000032.1 = NW_022872742.1 Primary Assembly 57029 na hic_scaffold_33 unplaced-scaffold na na DULD01000033.1 = NW_022872743.1 Primary Assembly 81912 na hic_scaffold_34 unplaced-scaffold na na DULD01000034.1 = NW_022872744.1 Primary Assembly 134832 na hic_scaffold_35 unplaced-scaffold na na DULD01000035.1 = NW_022872745.1 Primary Assembly 337361 na hic_scaffold_36 unplaced-scaffold na na DULD01000036.1 = NW_022872746.1 Primary Assembly 74710 na hic_scaffold_37 unplaced-scaffold na na DULD01000037.1 = NW_022872747.1 Primary Assembly 12261 na hic_scaffold_38 unplaced-scaffold na na DULD01000038.1 = NW_022872748.1 Primary Assembly 136878 na hic_scaffold_39 unplaced-scaffold na na DULD01000039.1 = NW_022872749.1 Primary Assembly 6046 na hic_scaffold_40 unplaced-scaffold na na DULD01000040.1 = NW_022872750.1 Primary Assembly 104664 na hic_scaffold_41 unplaced-scaffold na na DULD01000041.1 = NW_022872751.1 Primary Assembly 115153 na hic_scaffold_42 unplaced-scaffold na na DULD01000042.1 = NW_022872752.1 Primary Assembly 16119 na hic_scaffold_43 unplaced-scaffold na na DULD01000043.1 = NW_022872753.1 Primary Assembly 15702 na hic_scaffold_44 unplaced-scaffold na na DULD01000044.1 = NW_022872754.1 Primary Assembly 121979 na hic_scaffold_45 unplaced-scaffold na na DULD01000045.1 = NW_022872755.1 Primary Assembly 119367 na hic_scaffold_46 unplaced-scaffold na na DULD01000046.1 = NW_022872756.1 Primary Assembly 173559 na hic_scaffold_47 unplaced-scaffold na na DULD01000047.1 = NW_022872757.1 Primary Assembly 127196 na hic_scaffold_48 unplaced-scaffold na na DULD01000048.1 = NW_022872758.1 Primary Assembly 64670 na hic_scaffold_49 unplaced-scaffold na na DULD01000049.1 = NW_022872759.1 Primary Assembly 11857 na hic_scaffold_50 unplaced-scaffold na na DULD01000050.1 = NW_022872760.1 Primary Assembly 33613 na hic_scaffold_51 unplaced-scaffold na na DULD01000051.1 = NW_022872761.1 Primary Assembly 199143 na hic_scaffold_52 unplaced-scaffold na na DULD01000052.1 = NW_022872762.1 Primary Assembly 198288 na hic_scaffold_53 unplaced-scaffold na na DULD01000053.1 = NW_022872763.1 Primary Assembly 120526 na hic_scaffold_54 unplaced-scaffold na na DULD01000054.1 = NW_022872764.1 Primary Assembly 42920 na hic_scaffold_55 unplaced-scaffold na na DULD01000055.1 = NW_022872765.1 Primary Assembly 91024 na hic_scaffold_56 unplaced-scaffold na na DULD01000056.1 = NW_022872766.1 Primary Assembly 107208 na hic_scaffold_57 unplaced-scaffold na na DULD01000057.1 = NW_022872767.1 Primary Assembly 176840 na hic_scaffold_58 unplaced-scaffold na na DULD01000058.1 = NW_022872768.1 Primary Assembly 4892 na hic_scaffold_59 unplaced-scaffold na na DULD01000059.1 = NW_022872769.1 Primary Assembly 7915 na