# Assembly name: USDA_OLig_1.0 # Organism name: Osmia lignaria (orchard mason bee) # Isolate: UT-Olig-1 # Taxid: 473952 # BioSample: SAMN14365276 # BioProject: PRJNA553797 # Submitter: United States Department of Agriculture, Agricultural Research Service # Date: 2020-04-13 # Assembly type: haploid # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAAOZW01 # Assembly method: SMRT Link v. 2019-09-25 # Expected final version: yes # Genome coverage: 127.0x # Sequencing technology: PacBio; Illumina NextSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_012274295.1 # RefSeq assembly accession: GCF_012274295.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_012274335.1 GCF_012274335.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Osmia_lignaria_scaffold_000000F unplaced-scaffold na na JAAOZW010000022.1 = NW_023009249.1 Primary Assembly 13078691 na Osmia_lignaria_scaffold_000001F unplaced-scaffold na na JAAOZW010000004.1 = NW_023009250.1 Primary Assembly 11178118 na Osmia_lignaria_scaffold_000002F unplaced-scaffold na na JAAOZW010000126.1 = NW_023009251.1 Primary Assembly 10223016 na Osmia_lignaria_scaffold_000003F unplaced-scaffold na na JAAOZW010000142.1 = NW_023009252.1 Primary Assembly 9027127 na Osmia_lignaria_scaffold_000004F unplaced-scaffold na na JAAOZW010000049.1 = NW_023009253.1 Primary Assembly 8577317 na Osmia_lignaria_scaffold_000005F unplaced-scaffold na na JAAOZW010000084.1 = NW_023009254.1 Primary Assembly 8167139 na Osmia_lignaria_scaffold_000006F unplaced-scaffold na na JAAOZW010000042.1 = NW_023009255.1 Primary Assembly 7574569 na Osmia_lignaria_scaffold_000007F unplaced-scaffold na na JAAOZW010000146.1 = NW_023009256.1 Primary Assembly 7574767 na Osmia_lignaria_scaffold_000008F unplaced-scaffold na na JAAOZW010000075.1 = NW_023009257.1 Primary Assembly 7352596 na Osmia_lignaria_scaffold_000009F unplaced-scaffold na na JAAOZW010000127.1 = NW_023009258.1 Primary Assembly 5619846 na Osmia_lignaria_scaffold_000010F unplaced-scaffold na na JAAOZW010000080.1 = NW_023009259.1 Primary Assembly 5475884 na Osmia_lignaria_scaffold_000011F unplaced-scaffold na na JAAOZW010000064.1 = NW_023009260.1 Primary Assembly 5450798 na Osmia_lignaria_scaffold_000012F unplaced-scaffold na na JAAOZW010000021.1 = NW_023009261.1 Primary Assembly 5361548 na Osmia_lignaria_scaffold_000013F unplaced-scaffold na na JAAOZW010000038.1 = NW_023009262.1 Primary Assembly 4536845 na Osmia_lignaria_scaffold_000014F unplaced-scaffold na na JAAOZW010000017.1 = NW_023009263.1 Primary Assembly 4437063 na Osmia_lignaria_scaffold_000015F unplaced-scaffold na na JAAOZW010000139.1 = NW_023009264.1 Primary Assembly 4247587 na Osmia_lignaria_scaffold_000016F unplaced-scaffold na na JAAOZW010000103.1 = NW_023009265.1 Primary Assembly 4091876 na Osmia_lignaria_scaffold_000017F unplaced-scaffold na na JAAOZW010000145.1 = NW_023009266.1 Primary Assembly 3985193 na Osmia_lignaria_scaffold_000018F unplaced-scaffold na na JAAOZW010000055.1 = NW_023009267.1 Primary Assembly 3337379 na Osmia_lignaria_scaffold_000019F unplaced-scaffold na na JAAOZW010000118.1 = NW_023009268.1 Primary Assembly 2569914 na Osmia_lignaria_scaffold_000020F unplaced-scaffold na na JAAOZW010000009.1 = NW_023009269.1 Primary Assembly 2542098 na Osmia_lignaria_scaffold_000021F unplaced-scaffold na na JAAOZW010000107.1 = NW_023009270.1 Primary Assembly 2407638 na Osmia_lignaria_scaffold_000022F unplaced-scaffold na na JAAOZW010000014.1 = NW_023009271.1 Primary Assembly 2295725 na Osmia_lignaria_scaffold_000023F unplaced-scaffold na na JAAOZW010000047.1 = NW_023009272.1 Primary Assembly 2057997 na Osmia_lignaria_scaffold_000024F unplaced-scaffold na na JAAOZW010000081.1 = NW_023009273.1 Primary Assembly 2042615 na Osmia_lignaria_scaffold_000025F unplaced-scaffold na na JAAOZW010000101.1 = NW_023009274.1 Primary Assembly 2015934 na Osmia_lignaria_scaffold_000026F unplaced-scaffold na na JAAOZW010000137.1 = NW_023009275.1 Primary Assembly 1960048 na Osmia_lignaria_scaffold_000027F unplaced-scaffold na na JAAOZW010000115.1 = NW_023009276.1 Primary Assembly 1945318 na Osmia_lignaria_scaffold_000028F unplaced-scaffold na na JAAOZW010000033.1 = NW_023009277.1 Primary Assembly 1681001 na Osmia_lignaria_scaffold_000029F unplaced-scaffold na na JAAOZW010000031.1 = NW_023009278.1 Primary Assembly 1552285 na Osmia_lignaria_scaffold_000030F unplaced-scaffold na na JAAOZW010000072.1 = NW_023009279.1 Primary Assembly 1516178 na Osmia_lignaria_scaffold_000031F unplaced-scaffold na na JAAOZW010000073.1 = NW_023009280.1 Primary Assembly 1372102 na Osmia_lignaria_scaffold_000032F unplaced-scaffold na na JAAOZW010000091.1 = NW_023009281.1 Primary Assembly 1218903 na Osmia_lignaria_scaffold_000033F unplaced-scaffold na na JAAOZW010000074.1 = NW_023009282.1 Primary Assembly 982220 na Osmia_lignaria_scaffold_000034F unplaced-scaffold na na JAAOZW010000068.1 = NW_023009283.1 Primary Assembly 845368 na Osmia_lignaria_scaffold_000035F unplaced-scaffold na na JAAOZW010000122.1 = NW_023009284.1 Primary Assembly 801759 na Osmia_lignaria_scaffold_000036F unplaced-scaffold na na JAAOZW010000131.1 = NW_023009285.1 Primary Assembly 820881 na Osmia_lignaria_scaffold_000037F unplaced-scaffold na na JAAOZW010000052.1 = NW_023009286.1 Primary Assembly 719094 na Osmia_lignaria_scaffold_000038F unplaced-scaffold na na JAAOZW010000051.1 = NW_023009287.1 Primary Assembly 600435 na Osmia_lignaria_scaffold_000039F unplaced-scaffold na na JAAOZW010000025.1 = NW_023009288.1 Primary Assembly 587154 na Osmia_lignaria_scaffold_000040F unplaced-scaffold na na JAAOZW010000138.1 = NW_023009289.1 Primary Assembly 539001 na Osmia_lignaria_scaffold_000041F unplaced-scaffold na na JAAOZW010000016.1 = NW_023009290.1 Primary Assembly 536453 na Osmia_lignaria_scaffold_000042F unplaced-scaffold na na JAAOZW010000003.1 = NW_023009291.1 Primary Assembly 503771 na Osmia_lignaria_scaffold_000043F unplaced-scaffold na na JAAOZW010000001.1 = NW_023009292.1 Primary Assembly 454015 na Osmia_lignaria_scaffold_000044F unplaced-scaffold na na JAAOZW010000007.1 = NW_023009293.1 Primary Assembly 453029 na Osmia_lignaria_scaffold_000045F unplaced-scaffold na na JAAOZW010000048.1 = NW_023009294.1 Primary Assembly 445350 na Osmia_lignaria_scaffold_000046F unplaced-scaffold na na JAAOZW010000095.1 = NW_023009295.1 Primary Assembly 405333 na Osmia_lignaria_scaffold_000047F unplaced-scaffold na na JAAOZW010000037.1 = NW_023009296.1 Primary Assembly 408879 na Osmia_lignaria_scaffold_000048F unplaced-scaffold na na JAAOZW010000109.1 = NW_023009297.1 Primary Assembly 401007 na Osmia_lignaria_scaffold_000049F unplaced-scaffold na na JAAOZW010000012.1 = NW_023009298.1 Primary Assembly 379646 na Osmia_lignaria_scaffold_000050F unplaced-scaffold na na JAAOZW010000089.1 = NW_023009299.1 Primary Assembly 381769 na Osmia_lignaria_scaffold_000051F unplaced-scaffold na na JAAOZW010000125.1 = NW_023009300.1 Primary Assembly 379598 na Osmia_lignaria_scaffold_000052F unplaced-scaffold na na JAAOZW010000030.1 = NW_023009301.1 Primary Assembly 332515 na Osmia_lignaria_scaffold_000053F unplaced-scaffold na na JAAOZW010000077.1 = NW_023009302.1 Primary Assembly 313057 na Osmia_lignaria_scaffold_000054F unplaced-scaffold na na JAAOZW010000054.1 = NW_023009303.1 Primary Assembly 283835 na Osmia_lignaria_scaffold_000055F unplaced-scaffold na na JAAOZW010000039.1 = NW_023009304.1 Primary Assembly 265954 na Osmia_lignaria_scaffold_000056F unplaced-scaffold na na JAAOZW010000066.1 = NW_023009305.1 Primary Assembly 257250 na Osmia_lignaria_scaffold_000057F unplaced-scaffold na na JAAOZW010000023.1 = NW_023009306.1 Primary Assembly 239418 na Osmia_lignaria_scaffold_000058F unplaced-scaffold na na JAAOZW010000097.1 = NW_023009307.1 Primary Assembly 238054 na Osmia_lignaria_scaffold_000059F unplaced-scaffold na na JAAOZW010000085.1 = NW_023009308.1 Primary Assembly 215234 na Osmia_lignaria_scaffold_000060F unplaced-scaffold na na JAAOZW010000087.1 = NW_023009309.1 Primary Assembly 214307 na Osmia_lignaria_scaffold_000061F unplaced-scaffold na na JAAOZW010000106.1 = NW_023009310.1 Primary Assembly 216102 na Osmia_lignaria_scaffold_000062F unplaced-scaffold na na JAAOZW010000024.1 = NW_023009311.1 Primary Assembly 232184 na Osmia_lignaria_scaffold_000063F unplaced-scaffold na na JAAOZW010000121.1 = NW_023009312.1 Primary Assembly 215845 na Osmia_lignaria_scaffold_000064F unplaced-scaffold na na JAAOZW010000083.1 = NW_023009313.1 Primary Assembly 227808 na Osmia_lignaria_scaffold_000065F unplaced-scaffold na na JAAOZW010000035.1 = NW_023009314.1 Primary Assembly 209075 na Osmia_lignaria_scaffold_000066F unplaced-scaffold na na JAAOZW010000111.1 = NW_023009315.1 Primary Assembly 211375 na Osmia_lignaria_scaffold_000067F unplaced-scaffold na na JAAOZW010000071.1 = NW_023009316.1 Primary Assembly 203291 na Osmia_lignaria_scaffold_000068F unplaced-scaffold na na JAAOZW010000026.1 = NW_023009317.1 Primary Assembly 186470 na Osmia_lignaria_scaffold_000069F unplaced-scaffold na na JAAOZW010000078.1 = NW_023009318.1 Primary Assembly 186669 na Osmia_lignaria_scaffold_000070F unplaced-scaffold na na JAAOZW010000088.1 = NW_023009319.1 Primary Assembly 171859 na Osmia_lignaria_scaffold_000071F unplaced-scaffold na na JAAOZW010000133.1 = NW_023009320.1 Primary Assembly 181515 na Osmia_lignaria_scaffold_000072F unplaced-scaffold na na JAAOZW010000053.1 = NW_023009321.1 Primary Assembly 163091 na Osmia_lignaria_scaffold_000073F unplaced-scaffold na na JAAOZW010000102.1 = NW_023009322.1 Primary Assembly 174173 na Osmia_lignaria_scaffold_000074F unplaced-scaffold na na JAAOZW010000059.1 = NW_023009323.1 Primary Assembly 39194 na Osmia_lignaria_scaffold_000075F unplaced-scaffold na na JAAOZW010000124.1 = NW_023009324.1 Primary Assembly 169505 na Osmia_lignaria_scaffold_000076F unplaced-scaffold na na JAAOZW010000050.1 = NW_023009325.1 Primary Assembly 173870 na Osmia_lignaria_scaffold_000077F unplaced-scaffold na na JAAOZW010000108.1 = NW_023009326.1 Primary Assembly 148777 na Osmia_lignaria_scaffold_000078F unplaced-scaffold na na JAAOZW010000020.1 = NW_023009327.1 Primary Assembly 134296 na Osmia_lignaria_scaffold_000079F unplaced-scaffold na na JAAOZW010000082.1 = NW_023009328.1 Primary Assembly 140352 na Osmia_lignaria_scaffold_000080F unplaced-scaffold na na JAAOZW010000044.1 = NW_023009329.1 Primary Assembly 135552 na Osmia_lignaria_scaffold_000081F unplaced-scaffold na na JAAOZW010000132.1 = NW_023009330.1 Primary Assembly 124085 na Osmia_lignaria_scaffold_000082F unplaced-scaffold na na JAAOZW010000141.1 = NW_023009331.1 Primary Assembly 143711 na Osmia_lignaria_scaffold_000083F unplaced-scaffold na na JAAOZW010000041.1 = NW_023009332.1 Primary Assembly 148963 na Osmia_lignaria_scaffold_000084F unplaced-scaffold na na JAAOZW010000028.1 = NW_023009333.1 Primary Assembly 124549 na Osmia_lignaria_scaffold_000085F unplaced-scaffold na na JAAOZW010000034.1 = NW_023009334.1 Primary Assembly 118384 na Osmia_lignaria_scaffold_000086F unplaced-scaffold na na JAAOZW010000096.1 = NW_023009335.1 Primary Assembly 127172 na Osmia_lignaria_scaffold_000087F unplaced-scaffold na na JAAOZW010000094.1 = NW_023009336.1 Primary Assembly 132963 na Osmia_lignaria_scaffold_000088F unplaced-scaffold na na JAAOZW010000140.1 = NW_023009337.1 Primary Assembly 119341 na Osmia_lignaria_scaffold_000089F unplaced-scaffold na na JAAOZW010000076.1 = NW_023009338.1 Primary Assembly 106101 na Osmia_lignaria_scaffold_000090F unplaced-scaffold na na JAAOZW010000060.1 = NW_023009339.1 Primary Assembly 125404 na Osmia_lignaria_scaffold_000091F unplaced-scaffold na na JAAOZW010000079.1 = NW_023009340.1 Primary Assembly 106744 na Osmia_lignaria_scaffold_000092F unplaced-scaffold na na JAAOZW010000002.1 = NW_023009341.1 Primary Assembly 93969 na Osmia_lignaria_scaffold_000093F unplaced-scaffold na na JAAOZW010000063.1 = NW_023009342.1 Primary Assembly 93997 na Osmia_lignaria_scaffold_000094F unplaced-scaffold na na JAAOZW010000117.1 = NW_023009343.1 Primary Assembly 109412 na Osmia_lignaria_scaffold_000095F unplaced-scaffold na na JAAOZW010000119.1 = NW_023009344.1 Primary Assembly 90656 na Osmia_lignaria_scaffold_000096F unplaced-scaffold na na JAAOZW010000134.1 = NW_023009345.1 Primary Assembly 86356 na Osmia_lignaria_scaffold_000097F unplaced-scaffold na na JAAOZW010000046.1 = NW_023009346.1 Primary Assembly 94422 na Osmia_lignaria_scaffold_000098F unplaced-scaffold na na JAAOZW010000015.1 = NW_023009347.1 Primary Assembly 103275 na Osmia_lignaria_scaffold_000099F unplaced-scaffold na na JAAOZW010000070.1 = NW_023009348.1 Primary Assembly 109721 na Osmia_lignaria_scaffold_000100F unplaced-scaffold na na JAAOZW010000013.1 = NW_023009349.1 Primary Assembly 75494 na Osmia_lignaria_scaffold_000101F unplaced-scaffold na na JAAOZW010000120.1 = NW_023009350.1 Primary Assembly 101837 na Osmia_lignaria_scaffold_000102F unplaced-scaffold na na JAAOZW010000005.1 = NW_023009351.1 Primary Assembly 98487 na Osmia_lignaria_scaffold_000103F unplaced-scaffold na na JAAOZW010000057.1 = NW_023009352.1 Primary Assembly 90849 na Osmia_lignaria_scaffold_000104F unplaced-scaffold na na JAAOZW010000129.1 = NW_023009353.1 Primary Assembly 70507 na Osmia_lignaria_scaffold_000105F unplaced-scaffold na na JAAOZW010000098.1 = NW_023009354.1 Primary Assembly 74831 na Osmia_lignaria_scaffold_000106F unplaced-scaffold na na JAAOZW010000110.1 = NW_023009355.1 Primary Assembly 76483 na Osmia_lignaria_scaffold_000107F unplaced-scaffold na na JAAOZW010000112.1 = NW_023009356.1 Primary Assembly 65421 na Osmia_lignaria_scaffold_000108F unplaced-scaffold na na JAAOZW010000036.1 = NW_023009357.1 Primary Assembly 85350 na Osmia_lignaria_scaffold_000109F unplaced-scaffold na na JAAOZW010000056.1 = NW_023009358.1 Primary Assembly 51811 na Osmia_lignaria_scaffold_000110F unplaced-scaffold na na JAAOZW010000061.1 = NW_023009359.1 Primary Assembly 63513 na Osmia_lignaria_scaffold_000111F unplaced-scaffold na na JAAOZW010000086.1 = NW_023009360.1 Primary Assembly 55916 na Osmia_lignaria_scaffold_000112F unplaced-scaffold na na JAAOZW010000067.1 = NW_023009361.1 Primary Assembly 63791 na Osmia_lignaria_scaffold_000113F unplaced-scaffold na na JAAOZW010000029.1 = NW_023009362.1 Primary Assembly 71931 na Osmia_lignaria_scaffold_000114F unplaced-scaffold na na JAAOZW010000143.1 = NW_023009363.1 Primary Assembly 74068 na Osmia_lignaria_scaffold_000115F unplaced-scaffold na na JAAOZW010000010.1 = NW_023009364.1 Primary Assembly 49999 na Osmia_lignaria_scaffold_000116F unplaced-scaffold na na JAAOZW010000116.1 = NW_023009365.1 Primary Assembly 44977 na Osmia_lignaria_scaffold_000117F unplaced-scaffold na na JAAOZW010000090.1 = NW_023009366.1 Primary Assembly 46967 na Osmia_lignaria_scaffold_000118F unplaced-scaffold na na JAAOZW010000019.1 = NW_023009367.1 Primary Assembly 37804 na Osmia_lignaria_scaffold_000119F unplaced-scaffold na na JAAOZW010000113.1 = NW_023009368.1 Primary Assembly 68130 na Osmia_lignaria_scaffold_000120F unplaced-scaffold na na JAAOZW010000062.1 = NW_023009369.1 Primary Assembly 37232 na Osmia_lignaria_scaffold_000121F unplaced-scaffold na na JAAOZW010000045.1 = NW_023009370.1 Primary Assembly 56931 na Osmia_lignaria_scaffold_000122F unplaced-scaffold na na JAAOZW010000018.1 = NW_023009371.1 Primary Assembly 44723 na Osmia_lignaria_scaffold_000123F unplaced-scaffold na na JAAOZW010000093.1 = NW_023009372.1 Primary Assembly 41110 na Osmia_lignaria_scaffold_000124F unplaced-scaffold na na JAAOZW010000069.1 = NW_023009373.1 Primary Assembly 42656 na Osmia_lignaria_scaffold_000125F unplaced-scaffold na na JAAOZW010000123.1 = NW_023009374.1 Primary Assembly 20466 na Osmia_lignaria_scaffold_000126F unplaced-scaffold na na JAAOZW010000008.1 = NW_023009375.1 Primary Assembly 15440 na Osmia_lignaria_scaffold_000127F unplaced-scaffold na na JAAOZW010000128.1 = NW_023009376.1 Primary Assembly 37989 na Osmia_lignaria_scaffold_000128F unplaced-scaffold na na JAAOZW010000092.1 = NW_023009377.1 Primary Assembly 17450 na Osmia_lignaria_scaffold_000129F unplaced-scaffold na na JAAOZW010000144.1 = NW_023009378.1 Primary Assembly 13194 na Osmia_lignaria_scaffold_000130F unplaced-scaffold na na JAAOZW010000006.1 = NW_023009379.1 Primary Assembly 17777 na Osmia_lignaria_scaffold_000131F unplaced-scaffold na na JAAOZW010000135.1 = NW_023009380.1 Primary Assembly 38738 na Osmia_lignaria_scaffold_000132F unplaced-scaffold na na JAAOZW010000027.1 = NW_023009381.1 Primary Assembly 11405 na Osmia_lignaria_scaffold_000133F unplaced-scaffold na na JAAOZW010000043.1 = NW_023009382.1 Primary Assembly 10963 na Osmia_lignaria_scaffold_000134F unplaced-scaffold na na JAAOZW010000105.1 = NW_023009383.1 Primary Assembly 10933 na Osmia_lignaria_scaffold_000135F unplaced-scaffold na na JAAOZW010000065.1 = NW_023009384.1 Primary Assembly 14475 na Osmia_lignaria_scaffold_000136F unplaced-scaffold na na JAAOZW010000099.1 = NW_023009385.1 Primary Assembly 9259 na Osmia_lignaria_scaffold_000137F unplaced-scaffold na na JAAOZW010000130.1 = NW_023009386.1 Primary Assembly 8617 na Osmia_lignaria_scaffold_000138F unplaced-scaffold na na JAAOZW010000058.1 = NW_023009387.1 Primary Assembly 11850 na Osmia_lignaria_scaffold_000139F unplaced-scaffold na na JAAOZW010000104.1 = NW_023009388.1 Primary Assembly 5398 na Osmia_lignaria_scaffold_000140F unplaced-scaffold na na JAAOZW010000147.1 = NW_023009389.1 Primary Assembly 4821 na Osmia_lignaria_scaffold_000141F unplaced-scaffold na na JAAOZW010000032.1 = NW_023009390.1 Primary Assembly 6125 na Osmia_lignaria_scaffold_000142F unplaced-scaffold na na JAAOZW010000114.1 = NW_023009391.1 Primary Assembly 5345 na Osmia_lignaria_scaffold_000143F unplaced-scaffold na na JAAOZW010000011.1 = NW_023009392.1 Primary Assembly 4804 na Osmia_lignaria_scaffold_000144F unplaced-scaffold na na JAAOZW010000040.1 = NW_023009393.1 Primary Assembly 4269 na Osmia_lignaria_scaffold_000145F unplaced-scaffold na na JAAOZW010000100.1 = NW_023009394.1 Primary Assembly 3135 na Osmia_lignaria_scaffold_146 unplaced-scaffold na na JAAOZW010000136.1 = NW_023009395.1 Primary Assembly 48571 na