# Assembly name: LjGifu_v1.2 # Organism name: Lotus japonicus (eudicots) # Infraspecific name: ecotype=B-129 # Taxid: 34305 # BioSample: SAMN10284201 # BioProject: PRJNA498060 # Submitter: Aarhus University # Date: 2022-11-15 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # Assembly method: Canu v1.3 # Genome coverage: 100x # Sequencing technology: PacBio RSII # RefSeq category: Representative Genome # GenBank assembly accession: GCA_012489685.2 # RefSeq assembly accession: GCF_012489685.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_012489765.2 GCF_012489765.1 Primary Assembly ## GCA_012489815.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 1 assembled-molecule 1 Chromosome AP022629.1 = NC_080041.1 Primary Assembly 137250648 na 2 assembled-molecule 2 Chromosome AP022630.1 = NC_080042.1 Primary Assembly 95628465 na 3 assembled-molecule 3 Chromosome AP022631.1 = NC_080043.1 Primary Assembly 97635135 na 4 assembled-molecule 4 Chromosome AP022632.1 = NC_080044.1 Primary Assembly 83711341 na 5 assembled-molecule 5 Chromosome AP022633.1 = NC_080045.1 Primary Assembly 68161469 na 6 assembled-molecule 6 Chromosome AP022634.1 = NC_080046.1 Primary Assembly 67910847 na AP022635.2 unplaced-scaffold na na AP022635.2 = NW_026645418.1 Primary Assembly 384782 na AP026980.1 unplaced-scaffold na na AP026980.1 = NW_026645417.1 Primary Assembly 210764 na AP026981.1 unplaced-scaffold na na AP026981.1 = NW_026645416.1 Primary Assembly 109119 na AP026982.1 unplaced-scaffold na na AP026982.1 = NW_026645415.1 Primary Assembly 142803 na AP026983.1 unplaced-scaffold na na AP026983.1 = NW_026645414.1 Primary Assembly 771617 na AP026984.1 unplaced-scaffold na na AP026984.1 = NW_026645413.1 Primary Assembly 122770 na AP026985.1 unplaced-scaffold na na AP026985.1 = NW_026645412.1 Primary Assembly 287111 na AP026986.1 unplaced-scaffold na na AP026986.1 = NW_026645411.1 Primary Assembly 65388 na AP026987.1 unplaced-scaffold na na AP026987.1 = NW_026645410.1 Primary Assembly 19987 na AP026988.1 unplaced-scaffold na na AP026988.1 = NW_026645409.1 Primary Assembly 22392 na AP026989.1 unplaced-scaffold na na AP026989.1 = NW_026645408.1 Primary Assembly 39620 na AP026990.1 unplaced-scaffold na na AP026990.1 = NW_026645407.1 Primary Assembly 12655 na AP026991.1 unplaced-scaffold na na AP026991.1 = NW_026645406.1 Primary Assembly 16372 na AP026992.1 unplaced-scaffold na na AP026992.1 = NW_026645405.1 Primary Assembly 18345 na AP026993.1 unplaced-scaffold na na AP026993.1 = NW_026645404.1 Primary Assembly 14706 na AP026994.1 unplaced-scaffold na na AP026994.1 = NW_026645403.1 Primary Assembly 20902 na AP026995.1 unplaced-scaffold na na AP026995.1 = NW_026645402.1 Primary Assembly 21671 na AP026996.1 unplaced-scaffold na na AP026996.1 = NW_026645401.1 Primary Assembly 34966 na AP026997.1 unplaced-scaffold na na AP026997.1 = NW_026645400.1 Primary Assembly 50169 na AP026998.1 unplaced-scaffold na na AP026998.1 = NW_026645399.1 Primary Assembly 14512 na AP026999.1 unplaced-scaffold na na AP026999.1 = NW_026645398.1 Primary Assembly 23566 na AP027000.1 unplaced-scaffold na na AP027000.1 = NW_026645397.1 Primary Assembly 34010 na AP027001.1 unplaced-scaffold na na AP027001.1 = NW_026645396.1 Primary Assembly 20410 na AP027002.1 unplaced-scaffold na na AP027002.1 = NW_026645395.1 Primary Assembly 26735 na AP027003.1 unplaced-scaffold na na AP027003.1 = NW_026645394.1 Primary Assembly 23568 na AP027004.1 unplaced-scaffold na na AP027004.1 = NW_026645393.1 Primary Assembly 67065 na AP027005.1 unplaced-scaffold na na AP027005.1 = NW_026645392.1 Primary Assembly 20367 na AP027006.1 unplaced-scaffold na na AP027006.1 = NW_026645391.1 Primary Assembly 20471 na AP027007.1 unplaced-scaffold na na AP027007.1 = NW_026645390.1 Primary Assembly 15229 na AP027008.1 unplaced-scaffold na na AP027008.1 = NW_026645389.1 Primary Assembly 18019 na AP027009.1 unplaced-scaffold na na AP027009.1 = NW_026645388.1 Primary Assembly 15693 na AP027010.1 unplaced-scaffold na na AP027010.1 = NW_026645387.1 Primary Assembly 85709 na AP027011.1 unplaced-scaffold na na AP027011.1 = NW_026645386.1 Primary Assembly 36803 na AP027012.1 unplaced-scaffold na na AP027012.1 = NW_026645385.1 Primary Assembly 13090 na AP027013.1 unplaced-scaffold na na AP027013.1 = NW_026645384.1 Primary Assembly 34843 na AP027014.1 unplaced-scaffold na na AP027014.1 = NW_026645383.1 Primary Assembly 15606 na AP027015.1 unplaced-scaffold na na AP027015.1 = NW_026645382.1 Primary Assembly 106936 na AP027016.1 unplaced-scaffold na na AP027016.1 = NW_026645381.1 Primary Assembly 19493 na AP027017.1 unplaced-scaffold na na AP027017.1 = NW_026645380.1 Primary Assembly 23037 na AP027018.1 unplaced-scaffold na na AP027018.1 = NW_026645379.1 Primary Assembly 29541 na AP027019.1 unplaced-scaffold na na AP027019.1 = NW_026645378.1 Primary Assembly 16605 na AP027020.1 unplaced-scaffold na na AP027020.1 = NW_026645377.1 Primary Assembly 32905 na AP027021.1 unplaced-scaffold na na AP027021.1 = NW_026645376.1 Primary Assembly 17814 na AP027022.1 unplaced-scaffold na na AP027022.1 = NW_026645375.1 Primary Assembly 2000 na AP027023.1 unplaced-scaffold na na AP027023.1 = NW_026645374.1 Primary Assembly 2081 na AP027024.1 unplaced-scaffold na na AP027024.1 = NW_026645373.1 Primary Assembly 3768 na AP027025.1 unplaced-scaffold na na AP027025.1 = NW_026645372.1 Primary Assembly 11086 na AP027026.1 unplaced-scaffold na na AP027026.1 = NW_026645371.1 Primary Assembly 1533 na AP027027.1 unplaced-scaffold na na AP027027.1 = NW_026645370.1 Primary Assembly 2166 na AP027028.1 unplaced-scaffold na na AP027028.1 = NW_026645369.1 Primary Assembly 4452 na AP027029.1 unplaced-scaffold na na AP027029.1 = NW_026645368.1 Primary Assembly 18550 na AP027030.1 unplaced-scaffold na na AP027030.1 = NW_026645367.1 Primary Assembly 2755 na AP027031.1 unplaced-scaffold na na AP027031.1 = NW_026645366.1 Primary Assembly 19948 na AP027032.1 unplaced-scaffold na na AP027032.1 = NW_026645365.1 Primary Assembly 5084 na AP027033.1 unplaced-scaffold na na AP027033.1 = NW_026645364.1 Primary Assembly 12888 na AP027034.1 unplaced-scaffold na na AP027034.1 = NW_026645363.1 Primary Assembly 11106 na AP027035.1 unplaced-scaffold na na AP027035.1 = NW_026645362.1 Primary Assembly 20155 na AP027036.1 unplaced-scaffold na na AP027036.1 = NW_026645361.1 Primary Assembly 133965 na AP027037.1 unplaced-scaffold na na AP027037.1 = NW_026645360.1 Primary Assembly 58779 na MT assembled-molecule MT Mitochondrion AP022637.1 <> na non-nuclear 360143 na Pltd assembled-molecule Pltd Chloroplast AP022636.1 <> na non-nuclear 150518 na