# Assembly name: ASM1317900v1 # Organism name: Bradyrhizobium denitrificans (a-proteobacteria) # Infraspecific name: strain=LMG 8443 # Taxid: 2734912 # BioSample: SAMN14852690 # BioProject: PRJNA631138 # Submitter: Yantai Institute of Coastal Zone Research # Date: 2020-05-27 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JABFDP01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_013179005.1 # RefSeq assembly accession: GCF_013179005.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_013179025.1 GCF_013179025.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 unplaced-scaffold na na JABFDP010000001.1 = NZ_JABFDP010000001.1 Primary Assembly 491180 na Scaffold2 unplaced-scaffold na na JABFDP010000002.1 = NZ_JABFDP010000002.1 Primary Assembly 315187 na Scaffold3 unplaced-scaffold na na JABFDP010000003.1 = NZ_JABFDP010000003.1 Primary Assembly 296230 na Scaffold4 unplaced-scaffold na na JABFDP010000004.1 = NZ_JABFDP010000004.1 Primary Assembly 296086 na Scaffold5 unplaced-scaffold na na JABFDP010000005.1 = NZ_JABFDP010000005.1 Primary Assembly 290001 na Scaffold6 unplaced-scaffold na na JABFDP010000006.1 = NZ_JABFDP010000006.1 Primary Assembly 284989 na Scaffold7 unplaced-scaffold na na JABFDP010000007.1 = NZ_JABFDP010000007.1 Primary Assembly 264329 na Scaffold8 unplaced-scaffold na na JABFDP010000008.1 = NZ_JABFDP010000008.1 Primary Assembly 257289 na Scaffold9 unplaced-scaffold na na JABFDP010000009.1 = NZ_JABFDP010000009.1 Primary Assembly 253588 na Scaffold10 unplaced-scaffold na na JABFDP010000010.1 = NZ_JABFDP010000010.1 Primary Assembly 249663 na Scaffold11 unplaced-scaffold na na JABFDP010000011.1 = NZ_JABFDP010000011.1 Primary Assembly 249389 na Scaffold12 unplaced-scaffold na na JABFDP010000012.1 = NZ_JABFDP010000012.1 Primary Assembly 247592 na Scaffold13 unplaced-scaffold na na JABFDP010000013.1 = NZ_JABFDP010000013.1 Primary Assembly 237765 na Scaffold14 unplaced-scaffold na na JABFDP010000014.1 = NZ_JABFDP010000014.1 Primary Assembly 234100 na Scaffold15 unplaced-scaffold na na JABFDP010000015.1 = NZ_JABFDP010000015.1 Primary Assembly 200228 na Scaffold16 unplaced-scaffold na na JABFDP010000016.1 = NZ_JABFDP010000016.1 Primary Assembly 199084 na Scaffold17 unplaced-scaffold na na JABFDP010000017.1 = NZ_JABFDP010000017.1 Primary Assembly 196433 na Scaffold18 unplaced-scaffold na na JABFDP010000018.1 = NZ_JABFDP010000018.1 Primary Assembly 188826 na Scaffold19 unplaced-scaffold na na JABFDP010000019.1 = NZ_JABFDP010000019.1 Primary Assembly 188794 na Scaffold20 unplaced-scaffold na na JABFDP010000020.1 = NZ_JABFDP010000020.1 Primary Assembly 176194 na Scaffold21 unplaced-scaffold na na JABFDP010000021.1 = NZ_JABFDP010000021.1 Primary Assembly 174961 na Scaffold22 unplaced-scaffold na na JABFDP010000022.1 = NZ_JABFDP010000022.1 Primary Assembly 172302 na Scaffold23 unplaced-scaffold na na JABFDP010000023.1 = NZ_JABFDP010000023.1 Primary Assembly 172255 na Scaffold24 unplaced-scaffold na na JABFDP010000024.1 = NZ_JABFDP010000024.1 Primary Assembly 157879 na Scaffold25 unplaced-scaffold na na JABFDP010000025.1 = NZ_JABFDP010000025.1 Primary Assembly 127607 na Scaffold26 unplaced-scaffold na na JABFDP010000026.1 = NZ_JABFDP010000026.1 Primary Assembly 126223 na Scaffold27 unplaced-scaffold na na JABFDP010000027.1 = NZ_JABFDP010000027.1 Primary Assembly 122247 na Scaffold28 unplaced-scaffold na na JABFDP010000028.1 = NZ_JABFDP010000028.1 Primary Assembly 119137 na Scaffold29 unplaced-scaffold na na JABFDP010000029.1 = NZ_JABFDP010000029.1 Primary Assembly 112951 na Scaffold30 unplaced-scaffold na na JABFDP010000030.1 = NZ_JABFDP010000030.1 Primary Assembly 110268 na Scaffold31 unplaced-scaffold na na JABFDP010000031.1 = NZ_JABFDP010000031.1 Primary Assembly 103716 na Scaffold32 unplaced-scaffold na na JABFDP010000032.1 = NZ_JABFDP010000032.1 Primary Assembly 103690 na Scaffold33 unplaced-scaffold na na JABFDP010000033.1 = NZ_JABFDP010000033.1 Primary Assembly 96841 na Scaffold34 unplaced-scaffold na na JABFDP010000034.1 = NZ_JABFDP010000034.1 Primary Assembly 95880 na Scaffold35 unplaced-scaffold na na JABFDP010000035.1 = NZ_JABFDP010000035.1 Primary Assembly 87889 na Scaffold36 unplaced-scaffold na na JABFDP010000036.1 = NZ_JABFDP010000036.1 Primary Assembly 87475 na Scaffold37 unplaced-scaffold na na JABFDP010000037.1 = NZ_JABFDP010000037.1 Primary Assembly 87146 na Scaffold38 unplaced-scaffold na na JABFDP010000038.1 = NZ_JABFDP010000038.1 Primary Assembly 72870 na Scaffold39 unplaced-scaffold na na JABFDP010000039.1 = NZ_JABFDP010000039.1 Primary Assembly 71198 na Scaffold40 unplaced-scaffold na na JABFDP010000040.1 = NZ_JABFDP010000040.1 Primary Assembly 64371 na Scaffold41 unplaced-scaffold na na JABFDP010000041.1 = NZ_JABFDP010000041.1 Primary Assembly 63340 na Scaffold42 unplaced-scaffold na na JABFDP010000042.1 = NZ_JABFDP010000042.1 Primary Assembly 55376 na Scaffold43 unplaced-scaffold na na JABFDP010000043.1 = NZ_JABFDP010000043.1 Primary Assembly 52381 na Scaffold44 unplaced-scaffold na na JABFDP010000044.1 = NZ_JABFDP010000044.1 Primary Assembly 50402 na Scaffold45 unplaced-scaffold na na JABFDP010000045.1 = NZ_JABFDP010000045.1 Primary Assembly 48036 na Scaffold46 unplaced-scaffold na na JABFDP010000046.1 = NZ_JABFDP010000046.1 Primary Assembly 45947 na Scaffold47 unplaced-scaffold na na JABFDP010000047.1 = NZ_JABFDP010000047.1 Primary Assembly 45501 na Scaffold48 unplaced-scaffold na na JABFDP010000048.1 = NZ_JABFDP010000048.1 Primary Assembly 42610 na Scaffold49 unplaced-scaffold na na JABFDP010000049.1 = NZ_JABFDP010000049.1 Primary Assembly 41937 na Scaffold50 unplaced-scaffold na na JABFDP010000050.1 = NZ_JABFDP010000050.1 Primary Assembly 41553 na Scaffold51 unplaced-scaffold na na JABFDP010000051.1 = NZ_JABFDP010000051.1 Primary Assembly 39987 na Scaffold52 unplaced-scaffold na na JABFDP010000052.1 = NZ_JABFDP010000052.1 Primary Assembly 38558 na Scaffold53 unplaced-scaffold na na JABFDP010000053.1 = NZ_JABFDP010000053.1 Primary Assembly 36426 na Scaffold54 unplaced-scaffold na na JABFDP010000054.1 = NZ_JABFDP010000054.1 Primary Assembly 34565 na Scaffold55 unplaced-scaffold na na JABFDP010000055.1 = NZ_JABFDP010000055.1 Primary Assembly 32691 na Scaffold56 unplaced-scaffold na na JABFDP010000056.1 = NZ_JABFDP010000056.1 Primary Assembly 27988 na Scaffold57 unplaced-scaffold na na JABFDP010000057.1 = NZ_JABFDP010000057.1 Primary Assembly 27143 na Scaffold58 unplaced-scaffold na na JABFDP010000058.1 = NZ_JABFDP010000058.1 Primary Assembly 25213 na Scaffold59 unplaced-scaffold na na JABFDP010000059.1 = NZ_JABFDP010000059.1 Primary Assembly 24802 na Scaffold60 unplaced-scaffold na na JABFDP010000060.1 = NZ_JABFDP010000060.1 Primary Assembly 24527 na Scaffold61 unplaced-scaffold na na JABFDP010000061.1 = NZ_JABFDP010000061.1 Primary Assembly 18760 na Scaffold62 unplaced-scaffold na na JABFDP010000062.1 = NZ_JABFDP010000062.1 Primary Assembly 18215 na Scaffold63 unplaced-scaffold na na JABFDP010000063.1 = NZ_JABFDP010000063.1 Primary Assembly 14018 na Scaffold64 unplaced-scaffold na na JABFDP010000064.1 = NZ_JABFDP010000064.1 Primary Assembly 11467 na Scaffold65 unplaced-scaffold na na JABFDP010000065.1 = NZ_JABFDP010000065.1 Primary Assembly 10924 na Scaffold66 unplaced-scaffold na na JABFDP010000066.1 = NZ_JABFDP010000066.1 Primary Assembly 10278 na Scaffold67 unplaced-scaffold na na JABFDP010000067.1 = NZ_JABFDP010000067.1 Primary Assembly 8936 na Scaffold68 unplaced-scaffold na na JABFDP010000068.1 = NZ_JABFDP010000068.1 Primary Assembly 6342 na Scaffold69 unplaced-scaffold na na JABFDP010000069.1 = NZ_JABFDP010000069.1 Primary Assembly 5975 na Scaffold70 unplaced-scaffold na na JABFDP010000070.1 = NZ_JABFDP010000070.1 Primary Assembly 5722 na Scaffold71 unplaced-scaffold na na JABFDP010000071.1 = NZ_JABFDP010000071.1 Primary Assembly 5594 na Scaffold72 unplaced-scaffold na na JABFDP010000072.1 = NZ_JABFDP010000072.1 Primary Assembly 3653 na Scaffold73 unplaced-scaffold na na JABFDP010000073.1 = NZ_JABFDP010000073.1 Primary Assembly 3284 na Scaffold74 unplaced-scaffold na na JABFDP010000074.1 = NZ_JABFDP010000074.1 Primary Assembly 2790 na Scaffold75 unplaced-scaffold na na JABFDP010000075.1 = NZ_JABFDP010000075.1 Primary Assembly 2713 na Scaffold76 unplaced-scaffold na na JABFDP010000076.1 = NZ_JABFDP010000076.1 Primary Assembly 2556 na Scaffold77 unplaced-scaffold na na JABFDP010000077.1 = NZ_JABFDP010000077.1 Primary Assembly 2267 na Scaffold78 unplaced-scaffold na na JABFDP010000078.1 = NZ_JABFDP010000078.1 Primary Assembly 1986 na Scaffold79 unplaced-scaffold na na JABFDP010000079.1 = NZ_JABFDP010000079.1 Primary Assembly 1395 na Scaffold80 unplaced-scaffold na na JABFDP010000080.1 = NZ_JABFDP010000080.1 Primary Assembly 1204 na Scaffold81 unplaced-scaffold na na JABFDP010000081.1 = NZ_JABFDP010000081.1 Primary Assembly 1047 na Scaffold82 unplaced-scaffold na na JABFDP010000082.1 = NZ_JABFDP010000082.1 Primary Assembly 888 na Scaffold83 unplaced-scaffold na na JABFDP010000083.1 = NZ_JABFDP010000083.1 Primary Assembly 874 na Scaffold84 unplaced-scaffold na na JABFDP010000084.1 = NZ_JABFDP010000084.1 Primary Assembly 802 na Scaffold85 unplaced-scaffold na na JABFDP010000085.1 = NZ_JABFDP010000085.1 Primary Assembly 792 na Scaffold86 unplaced-scaffold na na JABFDP010000086.1 = NZ_JABFDP010000086.1 Primary Assembly 756 na Scaffold87 unplaced-scaffold na na JABFDP010000087.1 = NZ_JABFDP010000087.1 Primary Assembly 653 na Scaffold88 unplaced-scaffold na na JABFDP010000088.1 = NZ_JABFDP010000088.1 Primary Assembly 626 na Scaffold89 unplaced-scaffold na na JABFDP010000089.1 = NZ_JABFDP010000089.1 Primary Assembly 609 na Scaffold90 unplaced-scaffold na na JABFDP010000090.1 = NZ_JABFDP010000090.1 Primary Assembly 545 na Scaffold91 unplaced-scaffold na na JABFDP010000091.1 = NZ_JABFDP010000091.1 Primary Assembly 472 na Scaffold92 unplaced-scaffold na na JABFDP010000092.1 = NZ_JABFDP010000092.1 Primary Assembly 455 na Scaffold93 unplaced-scaffold na na JABFDP010000093.1 = NZ_JABFDP010000093.1 Primary Assembly 449 na Scaffold94 unplaced-scaffold na na JABFDP010000094.1 = NZ_JABFDP010000094.1 Primary Assembly 442 na Scaffold95 unplaced-scaffold na na JABFDP010000095.1 = NZ_JABFDP010000095.1 Primary Assembly 430 na Scaffold96 unplaced-scaffold na na JABFDP010000096.1 = NZ_JABFDP010000096.1 Primary Assembly 423 na Scaffold97 unplaced-scaffold na na JABFDP010000097.1 = NZ_JABFDP010000097.1 Primary Assembly 414 na Scaffold98 unplaced-scaffold na na JABFDP010000098.1 = NZ_JABFDP010000098.1 Primary Assembly 392 na Scaffold99 unplaced-scaffold na na JABFDP010000099.1 = NZ_JABFDP010000099.1 Primary Assembly 361 na Scaffold100 unplaced-scaffold na na JABFDP010000100.1 = NZ_JABFDP010000100.1 Primary Assembly 330 na Scaffold101 unplaced-scaffold na na JABFDP010000101.1 = NZ_JABFDP010000101.1 Primary Assembly 310 na Scaffold102 unplaced-scaffold na na JABFDP010000102.1 = NZ_JABFDP010000102.1 Primary Assembly 305 na