# Assembly name: fAngAng1.pri # Organism name: Anguilla anguilla (European eel) # Isolate: fAngAng1 # Taxid: 7936 # BioSample: SAMN12623627 # BioProject: PRJNA561979 # Submitter: Vertebrate Genomes Project # Date: 2020-06-18 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JABVMG01 # Assembly method: FALCON v. 1.3.0; FALCON-Unzip v. 1.2.0; purge_dups v. github ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b; bionano Solve v. 3.4_06042019a; Salsa2 HiC v. 2.2; Arrow polishing and gap filling v. SMRTLink7.0.1; Longranger Align v. 2.2.2; freebayes v. 1.3.1; gEVAL manual curation v. 2020-02-04; VGP assembly pipeline v. 1.6 # Expected final version: no # Genome coverage: 51.23x # Sequencing technology: PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS # RefSeq category: Representative Genome # GenBank assembly accession: GCA_013347855.1 # RefSeq assembly accession: GCF_013347855.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_013347865.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_013347905.1 GCF_013347905.1 Primary Assembly ## GCF_013377515.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM023565.1 = NC_049201.1 Primary Assembly 88055840 na SUPER_2 assembled-molecule 2 Chromosome CM023566.1 = NC_049202.1 Primary Assembly 76644419 na SUPER_3 assembled-molecule 3 Chromosome CM023567.1 = NC_049203.1 Primary Assembly 71675879 na SUPER_4 assembled-molecule 4 Chromosome CM023568.1 = NC_049204.1 Primary Assembly 68139601 na SUPER_5 assembled-molecule 5 Chromosome CM023569.1 = NC_049205.1 Primary Assembly 66103252 na SUPER_6 assembled-molecule 6 Chromosome CM023570.1 = NC_049206.1 Primary Assembly 62028450 na SUPER_7 assembled-molecule 7 Chromosome CM023571.1 = NC_049207.1 Primary Assembly 57205429 na SUPER_8 assembled-molecule 8 Chromosome CM023572.1 = NC_049208.1 Primary Assembly 56164770 na SUPER_9 assembled-molecule 9 Chromosome CM023573.1 = NC_049209.1 Primary Assembly 55293050 na SUPER_10 assembled-molecule 10 Chromosome CM023574.1 = NC_049210.1 Primary Assembly 48287230 na SUPER_11 assembled-molecule 11 Chromosome CM023575.1 = NC_049211.1 Primary Assembly 44521221 na SUPER_12 assembled-molecule 12 Chromosome CM023576.1 = NC_049212.1 Primary Assembly 43524562 na SUPER_13 assembled-molecule 13 Chromosome CM023577.1 = NC_049213.1 Primary Assembly 41729550 na SUPER_14 assembled-molecule 14 Chromosome CM023578.1 = NC_049214.1 Primary Assembly 41497830 na SUPER_15 assembled-molecule 15 Chromosome CM023579.1 = NC_049215.1 Primary Assembly 37217334 na SUPER_16 assembled-molecule 16 Chromosome CM023580.1 = NC_049216.1 Primary Assembly 37151760 na SUPER_17 assembled-molecule 17 Chromosome CM023581.1 = NC_049217.1 Primary Assembly 32347174 na SUPER_18 assembled-molecule 18 Chromosome CM023582.1 = NC_049218.1 Primary Assembly 31569403 na SUPER_19 assembled-molecule 19 Chromosome CM023583.1 = NC_049219.1 Primary Assembly 18431713 na scaffold_105_arrow_ctg1 unplaced-scaffold na na JABVMG010000020.1 = NW_023312654.1 Primary Assembly 135944 na scaffold_108_arrow_ctg1 unplaced-scaffold na na JABVMG010000021.1 = NW_023312655.1 Primary Assembly 102924 na scaffold_114_arrow_ctg1 unplaced-scaffold na na JABVMG010000022.1 = NW_023312656.1 Primary Assembly 104537 na scaffold_117_arrow_ctg1 unplaced-scaffold na na JABVMG010000023.1 = NW_023312657.1 Primary Assembly 94232 na scaffold_127_arrow_ctg1 unplaced-scaffold na na JABVMG010000024.1 = NW_023312658.1 Primary Assembly 65285 na scaffold_129_arrow_ctg1 unplaced-scaffold na na JABVMG010000025.1 = NW_023312659.1 Primary Assembly 61169 na scaffold_136_arrow_ctg1 unplaced-scaffold na na JABVMG010000026.1 = NW_023312660.1 Primary Assembly 55675 na scaffold_145_arrow_ctg1 unplaced-scaffold na na JABVMG010000027.1 = NW_023312661.1 Primary Assembly 49587 na scaffold_146_arrow_ctg1 unplaced-scaffold na na JABVMG010000028.1 = NW_023312662.1 Primary Assembly 49466 na scaffold_147_arrow_ctg1 unplaced-scaffold na na JABVMG010000029.1 = NW_023312663.1 Primary Assembly 49628 na scaffold_151_arrow_ctg1 unplaced-scaffold na na JABVMG010000030.1 = NW_023312664.1 Primary Assembly 47442 na scaffold_157_arrow_ctg1 unplaced-scaffold na na JABVMG010000031.1 = NW_023312665.1 Primary Assembly 43634 na scaffold_171_arrow_ctg1 unplaced-scaffold na na JABVMG010000032.1 = NW_023312666.1 Primary Assembly 38352 na scaffold_173_arrow_ctg1 unplaced-scaffold na na JABVMG010000033.1 = NW_023312667.1 Primary Assembly 37935 na scaffold_174_arrow_ctg1 unplaced-scaffold na na JABVMG010000034.1 = NW_023312668.1 Primary Assembly 37705 na scaffold_177_arrow_ctg1 unplaced-scaffold na na JABVMG010000035.1 = NW_023312669.1 Primary Assembly 36128 na scaffold_180_arrow_ctg1 unplaced-scaffold na na JABVMG010000036.1 = NW_023312670.1 Primary Assembly 33875 na scaffold_190_arrow_ctg1 unplaced-scaffold na na JABVMG010000037.1 = NW_023312671.1 Primary Assembly 31498 na scaffold_192_arrow_ctg1 unplaced-scaffold na na JABVMG010000038.1 = NW_023312672.1 Primary Assembly 31211 na scaffold_194_arrow_ctg1 unplaced-scaffold na na JABVMG010000039.1 = NW_023312673.1 Primary Assembly 30776 na scaffold_196_arrow_ctg1 unplaced-scaffold na na JABVMG010000040.1 = NW_023312674.1 Primary Assembly 30407 na scaffold_198_arrow_ctg1 unplaced-scaffold na na JABVMG010000041.1 = NW_023312675.1 Primary Assembly 29542 na scaffold_201_arrow_ctg1 unplaced-scaffold na na JABVMG010000042.1 = NW_023312676.1 Primary Assembly 28565 na scaffold_208_arrow_ctg1 unplaced-scaffold na na JABVMG010000043.1 = NW_023312677.1 Primary Assembly 26064 na scaffold_209_arrow_ctg1 unplaced-scaffold na na JABVMG010000044.1 = NW_023312678.1 Primary Assembly 25098 na scaffold_212_arrow_ctg1 unplaced-scaffold na na JABVMG010000045.1 = NW_023312679.1 Primary Assembly 25531 na scaffold_214_arrow_ctg1 unplaced-scaffold na na JABVMG010000046.1 = NW_023312680.1 Primary Assembly 24160 na scaffold_218_arrow_ctg1 unplaced-scaffold na na JABVMG010000047.1 = NW_023312681.1 Primary Assembly 21370 na scaffold_220_arrow_ctg1 unplaced-scaffold na na JABVMG010000048.1 = NW_023312682.1 Primary Assembly 20421 na scaffold_221_arrow_ctg1 unplaced-scaffold na na JABVMG010000049.1 = NW_023312683.1 Primary Assembly 20299 na scaffold_222_arrow_ctg1 unplaced-scaffold na na JABVMG010000050.1 = NW_023312684.1 Primary Assembly 19817 na scaffold_226_arrow_ctg1 unplaced-scaffold na na JABVMG010000051.1 = NW_023312685.1 Primary Assembly 13132 na scaffold_227_arrow_ctg1 unplaced-scaffold na na JABVMG010000052.1 = NW_023312686.1 Primary Assembly 12088 na scaffold_229_arrow_ctg1 unplaced-scaffold na na JABVMG010000053.1 = NW_023312687.1 Primary Assembly 7279 na MT assembled-molecule MT Mitochondrion na <> NC_006531.1 non-nuclear 16683 na