# Assembly name: ASM1338517v1 # Organism name: Allochromatium humboldtianum (g-proteobacteria) # Infraspecific name: strain=DSM 21881 # Taxid: 504901 # BioSample: SAMN15375879 # BioProject: PRJNA642026 # Submitter: Bellevue University # Date: 2020-07-01 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JABZEO01 # Assembly method: Unicycler v. June 2020 # Expected final version: yes # Genome coverage: 55.0x # Sequencing technology: Illumina MiniSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_013385175.1 # RefSeq assembly accession: GCF_013385175.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_013385195.1 GCF_013385195.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name assembly_contig_1 unplaced-scaffold na na JABZEO010000001.1 = NZ_JABZEO010000001.1 Primary Assembly 528384 na assembly_contig_2 unplaced-scaffold na na JABZEO010000002.1 = NZ_JABZEO010000002.1 Primary Assembly 492684 na assembly_contig_3 unplaced-scaffold na na JABZEO010000003.1 = NZ_JABZEO010000003.1 Primary Assembly 441495 na assembly_contig_4 unplaced-scaffold na na JABZEO010000004.1 = NZ_JABZEO010000004.1 Primary Assembly 383298 na assembly_contig_5 unplaced-scaffold na na JABZEO010000005.1 = NZ_JABZEO010000005.1 Primary Assembly 311697 na assembly_contig_6 unplaced-scaffold na na JABZEO010000006.1 = NZ_JABZEO010000006.1 Primary Assembly 305111 na assembly_contig_7 unplaced-scaffold na na JABZEO010000007.1 = NZ_JABZEO010000007.1 Primary Assembly 252309 na assembly_contig_8 unplaced-scaffold na na JABZEO010000008.1 = NZ_JABZEO010000008.1 Primary Assembly 214237 na assembly_contig_9 unplaced-scaffold na na JABZEO010000009.1 = NZ_JABZEO010000009.1 Primary Assembly 194613 na assembly_contig_10 unplaced-scaffold na na JABZEO010000010.1 = NZ_JABZEO010000010.1 Primary Assembly 149456 na assembly_contig_11 unplaced-scaffold na na JABZEO010000011.1 = NZ_JABZEO010000011.1 Primary Assembly 149036 na assembly_contig_12 unplaced-scaffold na na JABZEO010000012.1 = NZ_JABZEO010000012.1 Primary Assembly 110425 na assembly_contig_13 unplaced-scaffold na na JABZEO010000013.1 = NZ_JABZEO010000013.1 Primary Assembly 110356 na assembly_contig_14 unplaced-scaffold na na JABZEO010000014.1 = NZ_JABZEO010000014.1 Primary Assembly 92888 na assembly_contig_15 unplaced-scaffold na na JABZEO010000015.1 = NZ_JABZEO010000015.1 Primary Assembly 87006 na assembly_contig_16 unplaced-scaffold na na JABZEO010000016.1 = NZ_JABZEO010000016.1 Primary Assembly 75185 na assembly_contig_17 unplaced-scaffold na na JABZEO010000017.1 = NZ_JABZEO010000017.1 Primary Assembly 63388 na assembly_contig_18 unplaced-scaffold na na JABZEO010000018.1 = NZ_JABZEO010000018.1 Primary Assembly 60821 na assembly_contig_19 unplaced-scaffold na na JABZEO010000019.1 = NZ_JABZEO010000019.1 Primary Assembly 48454 na assembly_contig_20 unplaced-scaffold na na JABZEO010000020.1 = NZ_JABZEO010000020.1 Primary Assembly 43973 na assembly_contig_21 unplaced-scaffold na na JABZEO010000021.1 = NZ_JABZEO010000021.1 Primary Assembly 42930 na assembly_contig_22 unplaced-scaffold na na JABZEO010000022.1 = NZ_JABZEO010000022.1 Primary Assembly 42296 na assembly_contig_23 unplaced-scaffold na na JABZEO010000023.1 = NZ_JABZEO010000023.1 Primary Assembly 37819 na assembly_contig_24 unplaced-scaffold na na JABZEO010000024.1 = NZ_JABZEO010000024.1 Primary Assembly 37288 na assembly_contig_25 unplaced-scaffold na na JABZEO010000025.1 = NZ_JABZEO010000025.1 Primary Assembly 29878 na assembly_contig_26 unplaced-scaffold na na JABZEO010000026.1 = NZ_JABZEO010000026.1 Primary Assembly 23571 na assembly_contig_27 unplaced-scaffold na na JABZEO010000027.1 = NZ_JABZEO010000027.1 Primary Assembly 22523 na assembly_contig_28 unplaced-scaffold na na JABZEO010000028.1 = NZ_JABZEO010000028.1 Primary Assembly 21939 na assembly_contig_29 unplaced-scaffold na na JABZEO010000029.1 = NZ_JABZEO010000029.1 Primary Assembly 21924 na assembly_contig_30 unplaced-scaffold na na JABZEO010000030.1 = NZ_JABZEO010000030.1 Primary Assembly 16216 na assembly_contig_31 unplaced-scaffold na na JABZEO010000031.1 = NZ_JABZEO010000031.1 Primary Assembly 13128 na assembly_contig_32 unplaced-scaffold na na JABZEO010000032.1 = NZ_JABZEO010000032.1 Primary Assembly 13122 na assembly_contig_33 unplaced-scaffold na na JABZEO010000033.1 = NZ_JABZEO010000033.1 Primary Assembly 12788 na assembly_contig_34 unplaced-scaffold na na JABZEO010000034.1 = NZ_JABZEO010000034.1 Primary Assembly 12628 na assembly_contig_35 unplaced-scaffold na na JABZEO010000035.1 = NZ_JABZEO010000035.1 Primary Assembly 12280 na assembly_contig_36 unplaced-scaffold na na JABZEO010000036.1 = NZ_JABZEO010000036.1 Primary Assembly 11458 na assembly_contig_37 unplaced-scaffold na na JABZEO010000037.1 = NZ_JABZEO010000037.1 Primary Assembly 11444 na assembly_contig_38 unplaced-scaffold na na JABZEO010000038.1 = NZ_JABZEO010000038.1 Primary Assembly 9340 na assembly_contig_39 unplaced-scaffold na na JABZEO010000039.1 = NZ_JABZEO010000039.1 Primary Assembly 7437 na assembly_contig_40 unplaced-scaffold na na JABZEO010000040.1 = NZ_JABZEO010000040.1 Primary Assembly 6390 na assembly_contig_41 unplaced-scaffold na na JABZEO010000041.1 = NZ_JABZEO010000041.1 Primary Assembly 5064 na assembly_contig_42 unplaced-scaffold na na JABZEO010000042.1 = NZ_JABZEO010000042.1 Primary Assembly 5025 na assembly_contig_43 unplaced-scaffold na na JABZEO010000043.1 = NZ_JABZEO010000043.1 Primary Assembly 4928 na assembly_contig_44 unplaced-scaffold na na JABZEO010000044.1 = NZ_JABZEO010000044.1 Primary Assembly 4840 na assembly_contig_45 unplaced-scaffold na na JABZEO010000045.1 = NZ_JABZEO010000045.1 Primary Assembly 4803 na assembly_contig_46 unplaced-scaffold na na JABZEO010000046.1 = NZ_JABZEO010000046.1 Primary Assembly 3872 na assembly_contig_47 unplaced-scaffold na na JABZEO010000047.1 = NZ_JABZEO010000047.1 Primary Assembly 3524 na assembly_contig_48 unplaced-scaffold na na JABZEO010000048.1 = NZ_JABZEO010000048.1 Primary Assembly 3106 na assembly_contig_49 unplaced-scaffold na na JABZEO010000049.1 = NZ_JABZEO010000049.1 Primary Assembly 2045 na assembly_contig_50 unplaced-scaffold na na JABZEO010000050.1 = NZ_JABZEO010000050.1 Primary Assembly 1640 na assembly_contig_51 unplaced-scaffold na na JABZEO010000051.1 = NZ_JABZEO010000051.1 Primary Assembly 1575 na assembly_contig_52 unplaced-scaffold na na JABZEO010000052.1 = NZ_JABZEO010000052.1 Primary Assembly 1537 na assembly_contig_53 unplaced-scaffold na na JABZEO010000053.1 = NZ_JABZEO010000053.1 Primary Assembly 1516 na assembly_contig_54 unplaced-scaffold na na JABZEO010000054.1 = NZ_JABZEO010000054.1 Primary Assembly 1438 na assembly_contig_55 unplaced-scaffold na na JABZEO010000055.1 = NZ_JABZEO010000055.1 Primary Assembly 1299 na assembly_contig_56 unplaced-scaffold na na JABZEO010000056.1 = NZ_JABZEO010000056.1 Primary Assembly 1193 na assembly_contig_57 unplaced-scaffold na na JABZEO010000057.1 = NZ_JABZEO010000057.1 Primary Assembly 1112 na assembly_contig_58 unplaced-scaffold na na JABZEO010000058.1 = NZ_JABZEO010000058.1 Primary Assembly 1068 na assembly_contig_59 unplaced-scaffold na na JABZEO010000059.1 = NZ_JABZEO010000059.1 Primary Assembly 857 na assembly_contig_60 unplaced-scaffold na na JABZEO010000060.1 = NZ_JABZEO010000060.1 Primary Assembly 835 na assembly_contig_61 unplaced-scaffold na na JABZEO010000061.1 = NZ_JABZEO010000061.1 Primary Assembly 817 na assembly_contig_62 unplaced-scaffold na na JABZEO010000062.1 = NZ_JABZEO010000062.1 Primary Assembly 750 na assembly_contig_63 unplaced-scaffold na na JABZEO010000063.1 = NZ_JABZEO010000063.1 Primary Assembly 695 na assembly_contig_64 unplaced-scaffold na na JABZEO010000064.1 = NZ_JABZEO010000064.1 Primary Assembly 662 na assembly_contig_65 unplaced-scaffold na na JABZEO010000065.1 = NZ_JABZEO010000065.1 Primary Assembly 632 na assembly_contig_66 unplaced-scaffold na na JABZEO010000066.1 = NZ_JABZEO010000066.1 Primary Assembly 628 na assembly_contig_67 unplaced-scaffold na na JABZEO010000067.1 = NZ_JABZEO010000067.1 Primary Assembly 610 na assembly_contig_68 unplaced-scaffold na na JABZEO010000068.1 = NZ_JABZEO010000068.1 Primary Assembly 607 na assembly_contig_69 unplaced-scaffold na na JABZEO010000069.1 = NZ_JABZEO010000069.1 Primary Assembly 522 na assembly_contig_70 unplaced-scaffold na na JABZEO010000070.1 = NZ_JABZEO010000070.1 Primary Assembly 498 na assembly_contig_71 unplaced-scaffold na na JABZEO010000071.1 = NZ_JABZEO010000071.1 Primary Assembly 492 na assembly_contig_72 unplaced-scaffold na na JABZEO010000072.1 = NZ_JABZEO010000072.1 Primary Assembly 444 na assembly_contig_73 unplaced-scaffold na na JABZEO010000073.1 = NZ_JABZEO010000073.1 Primary Assembly 434 na assembly_contig_74 unplaced-scaffold na na JABZEO010000074.1 = NZ_JABZEO010000074.1 Primary Assembly 431 na assembly_contig_75 unplaced-scaffold na na JABZEO010000075.1 = NZ_JABZEO010000075.1 Primary Assembly 427 na assembly_contig_76 unplaced-scaffold na na JABZEO010000076.1 = NZ_JABZEO010000076.1 Primary Assembly 397 na assembly_contig_77 unplaced-scaffold na na JABZEO010000077.1 = NZ_JABZEO010000077.1 Primary Assembly 348 na assembly_contig_78 unplaced-scaffold na na JABZEO010000078.1 = NZ_JABZEO010000078.1 Primary Assembly 348 na assembly_contig_79 unplaced-scaffold na na JABZEO010000079.1 = NZ_JABZEO010000079.1 Primary Assembly 345 na assembly_contig_80 unplaced-scaffold na na JABZEO010000080.1 = NZ_JABZEO010000080.1 Primary Assembly 335 na assembly_contig_81 unplaced-scaffold na na JABZEO010000081.1 = NZ_JABZEO010000081.1 Primary Assembly 327 na assembly_contig_82 unplaced-scaffold na na JABZEO010000082.1 = NZ_JABZEO010000082.1 Primary Assembly 336 na assembly_contig_83 unplaced-scaffold na na JABZEO010000083.1 = NZ_JABZEO010000083.1 Primary Assembly 315 na assembly_contig_84 unplaced-scaffold na na JABZEO010000084.1 = NZ_JABZEO010000084.1 Primary Assembly 310 na assembly_contig_85 unplaced-scaffold na na JABZEO010000085.1 = NZ_JABZEO010000085.1 Primary Assembly 310 na assembly_contig_86 unplaced-scaffold na na JABZEO010000086.1 = NZ_JABZEO010000086.1 Primary Assembly 308 na