# Assembly name: ASM1414522v1 # Organism name: Thiospirillum jenense (g-proteobacteria) # Infraspecific name: strain=DSM 216 # Taxid: 1653858 # BioSample: SAMN15192446 # BioProject: PRJNA638421 # Submitter: Bellevue University # Date: 2020-08-10 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JABVCQ01 # Assembly method: Unicycler v. Dec-2019 # Expected final version: yes # Genome coverage: 56.0x # Sequencing technology: Illumina MiniSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_014145225.1 # RefSeq assembly accession: GCF_014145225.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_014145285.1 GCF_014145285.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name assembly_contig_1 unplaced-scaffold na na JABVCQ010000001.1 = NZ_JABVCQ010000001.1 Primary Assembly 178986 na assembly_contig_2 unplaced-scaffold na na JABVCQ010000002.1 = NZ_JABVCQ010000002.1 Primary Assembly 161207 na assembly_contig_3 unplaced-scaffold na na JABVCQ010000003.1 = NZ_JABVCQ010000003.1 Primary Assembly 156967 na assembly_contig_4 unplaced-scaffold na na JABVCQ010000004.1 = NZ_JABVCQ010000004.1 Primary Assembly 153493 na assembly_contig_5 unplaced-scaffold na na JABVCQ010000005.1 = NZ_JABVCQ010000005.1 Primary Assembly 143727 na assembly_contig_6 unplaced-scaffold na na JABVCQ010000006.1 = NZ_JABVCQ010000006.1 Primary Assembly 139991 na assembly_contig_7 unplaced-scaffold na na JABVCQ010000007.1 = NZ_JABVCQ010000007.1 Primary Assembly 130157 na assembly_contig_8 unplaced-scaffold na na JABVCQ010000008.1 = NZ_JABVCQ010000008.1 Primary Assembly 123497 na assembly_contig_9 unplaced-scaffold na na JABVCQ010000009.1 = NZ_JABVCQ010000009.1 Primary Assembly 110098 na assembly_contig_10 unplaced-scaffold na na JABVCQ010000010.1 = NZ_JABVCQ010000010.1 Primary Assembly 107836 na assembly_contig_11 unplaced-scaffold na na JABVCQ010000011.1 = NZ_JABVCQ010000011.1 Primary Assembly 102991 na assembly_contig_12 unplaced-scaffold na na JABVCQ010000012.1 = NZ_JABVCQ010000012.1 Primary Assembly 91874 na assembly_contig_13 unplaced-scaffold na na JABVCQ010000013.1 = NZ_JABVCQ010000013.1 Primary Assembly 86232 na assembly_contig_14 unplaced-scaffold na na JABVCQ010000014.1 = NZ_JABVCQ010000014.1 Primary Assembly 75641 na assembly_contig_15 unplaced-scaffold na na JABVCQ010000015.1 = NZ_JABVCQ010000015.1 Primary Assembly 75329 na assembly_contig_16 unplaced-scaffold na na JABVCQ010000016.1 = NZ_JABVCQ010000016.1 Primary Assembly 72447 na assembly_contig_17 unplaced-scaffold na na JABVCQ010000017.1 = NZ_JABVCQ010000017.1 Primary Assembly 68747 na assembly_contig_18 unplaced-scaffold na na JABVCQ010000018.1 = NZ_JABVCQ010000018.1 Primary Assembly 63817 na assembly_contig_19 unplaced-scaffold na na JABVCQ010000019.1 = NZ_JABVCQ010000019.1 Primary Assembly 63784 na assembly_contig_20 unplaced-scaffold na na JABVCQ010000020.1 = NZ_JABVCQ010000020.1 Primary Assembly 60254 na assembly_contig_21 unplaced-scaffold na na JABVCQ010000021.1 = NZ_JABVCQ010000021.1 Primary Assembly 59321 na assembly_contig_22 unplaced-scaffold na na JABVCQ010000022.1 = NZ_JABVCQ010000022.1 Primary Assembly 58041 na assembly_contig_23 unplaced-scaffold na na JABVCQ010000023.1 = NZ_JABVCQ010000023.1 Primary Assembly 54118 na assembly_contig_24 unplaced-scaffold na na JABVCQ010000024.1 = NZ_JABVCQ010000024.1 Primary Assembly 53806 na assembly_contig_25 unplaced-scaffold na na JABVCQ010000025.1 = NZ_JABVCQ010000025.1 Primary Assembly 52847 na assembly_contig_26 unplaced-scaffold na na JABVCQ010000026.1 = NZ_JABVCQ010000026.1 Primary Assembly 48667 na assembly_contig_27 unplaced-scaffold na na JABVCQ010000027.1 = NZ_JABVCQ010000027.1 Primary Assembly 47044 na assembly_contig_28 unplaced-scaffold na na JABVCQ010000028.1 = NZ_JABVCQ010000028.1 Primary Assembly 44553 na assembly_contig_29 unplaced-scaffold na na JABVCQ010000029.1 = NZ_JABVCQ010000029.1 Primary Assembly 44025 na assembly_contig_30 unplaced-scaffold na na JABVCQ010000030.1 = NZ_JABVCQ010000030.1 Primary Assembly 42047 na assembly_contig_31 unplaced-scaffold na na JABVCQ010000031.1 = NZ_JABVCQ010000031.1 Primary Assembly 37921 na assembly_contig_32 unplaced-scaffold na na JABVCQ010000032.1 = NZ_JABVCQ010000032.1 Primary Assembly 34961 na assembly_contig_33 unplaced-scaffold na na JABVCQ010000033.1 = NZ_JABVCQ010000033.1 Primary Assembly 34692 na assembly_contig_34 unplaced-scaffold na na JABVCQ010000034.1 = NZ_JABVCQ010000034.1 Primary Assembly 30792 na assembly_contig_35 unplaced-scaffold na na JABVCQ010000035.1 = NZ_JABVCQ010000035.1 Primary Assembly 28581 na assembly_contig_36 unplaced-scaffold na na JABVCQ010000036.1 = NZ_JABVCQ010000036.1 Primary Assembly 23960 na assembly_contig_37 unplaced-scaffold na na JABVCQ010000037.1 = NZ_JABVCQ010000037.1 Primary Assembly 23317 na assembly_contig_38 unplaced-scaffold na na JABVCQ010000038.1 = NZ_JABVCQ010000038.1 Primary Assembly 22625 na assembly_contig_39 unplaced-scaffold na na JABVCQ010000039.1 = NZ_JABVCQ010000039.1 Primary Assembly 21927 na assembly_contig_40 unplaced-scaffold na na JABVCQ010000040.1 = NZ_JABVCQ010000040.1 Primary Assembly 19864 na assembly_contig_41 unplaced-scaffold na na JABVCQ010000041.1 = NZ_JABVCQ010000041.1 Primary Assembly 16004 na assembly_contig_42 unplaced-scaffold na na JABVCQ010000042.1 = NZ_JABVCQ010000042.1 Primary Assembly 15796 na assembly_contig_43 unplaced-scaffold na na JABVCQ010000043.1 = NZ_JABVCQ010000043.1 Primary Assembly 15098 na assembly_contig_44 unplaced-scaffold na na JABVCQ010000044.1 = NZ_JABVCQ010000044.1 Primary Assembly 14523 na assembly_contig_45 unplaced-scaffold na na JABVCQ010000045.1 = NZ_JABVCQ010000045.1 Primary Assembly 13222 na assembly_contig_46 unplaced-scaffold na na JABVCQ010000046.1 = NZ_JABVCQ010000046.1 Primary Assembly 11920 na assembly_contig_47 unplaced-scaffold na na JABVCQ010000047.1 = NZ_JABVCQ010000047.1 Primary Assembly 11480 na assembly_contig_48 unplaced-scaffold na na JABVCQ010000048.1 = NZ_JABVCQ010000048.1 Primary Assembly 11093 na assembly_contig_49 unplaced-scaffold na na JABVCQ010000049.1 = NZ_JABVCQ010000049.1 Primary Assembly 10686 na assembly_contig_50 unplaced-scaffold na na JABVCQ010000050.1 = NZ_JABVCQ010000050.1 Primary Assembly 9967 na assembly_contig_51 unplaced-scaffold na na JABVCQ010000051.1 = NZ_JABVCQ010000051.1 Primary Assembly 9899 na assembly_contig_52 unplaced-scaffold na na JABVCQ010000052.1 = NZ_JABVCQ010000052.1 Primary Assembly 7699 na assembly_contig_53 unplaced-scaffold na na JABVCQ010000053.1 = NZ_JABVCQ010000053.1 Primary Assembly 6666 na assembly_contig_54 unplaced-scaffold na na JABVCQ010000054.1 = NZ_JABVCQ010000054.1 Primary Assembly 6022 na assembly_contig_55 unplaced-scaffold na na JABVCQ010000055.1 = NZ_JABVCQ010000055.1 Primary Assembly 5849 na assembly_contig_56 unplaced-scaffold na na JABVCQ010000056.1 = NZ_JABVCQ010000056.1 Primary Assembly 5677 na assembly_contig_57 unplaced-scaffold na na JABVCQ010000057.1 = NZ_JABVCQ010000057.1 Primary Assembly 5368 na assembly_contig_58 unplaced-scaffold na na JABVCQ010000058.1 = NZ_JABVCQ010000058.1 Primary Assembly 5190 na assembly_contig_59 unplaced-scaffold na na JABVCQ010000059.1 = NZ_JABVCQ010000059.1 Primary Assembly 4871 na assembly_contig_60 unplaced-scaffold na na JABVCQ010000060.1 = NZ_JABVCQ010000060.1 Primary Assembly 4248 na assembly_contig_61 unplaced-scaffold na na JABVCQ010000061.1 = NZ_JABVCQ010000061.1 Primary Assembly 3863 na assembly_contig_62 unplaced-scaffold na na JABVCQ010000062.1 = NZ_JABVCQ010000062.1 Primary Assembly 3732 na assembly_contig_63 unplaced-scaffold na na JABVCQ010000063.1 = NZ_JABVCQ010000063.1 Primary Assembly 3450 na assembly_contig_64 unplaced-scaffold na na JABVCQ010000064.1 = NZ_JABVCQ010000064.1 Primary Assembly 3006 na assembly_contig_65 unplaced-scaffold na na JABVCQ010000065.1 = NZ_JABVCQ010000065.1 Primary Assembly 2986 na assembly_contig_66 unplaced-scaffold na na JABVCQ010000066.1 = NZ_JABVCQ010000066.1 Primary Assembly 2833 na assembly_contig_67 unplaced-scaffold na na JABVCQ010000067.1 = NZ_JABVCQ010000067.1 Primary Assembly 2829 na assembly_contig_68 unplaced-scaffold na na JABVCQ010000068.1 = NZ_JABVCQ010000068.1 Primary Assembly 2696 na assembly_contig_69 unplaced-scaffold na na JABVCQ010000069.1 = NZ_JABVCQ010000069.1 Primary Assembly 2518 na assembly_contig_70 unplaced-scaffold na na JABVCQ010000070.1 = NZ_JABVCQ010000070.1 Primary Assembly 2241 na assembly_contig_71 unplaced-scaffold na na JABVCQ010000071.1 = NZ_JABVCQ010000071.1 Primary Assembly 2091 na assembly_contig_72 unplaced-scaffold na na JABVCQ010000072.1 = NZ_JABVCQ010000072.1 Primary Assembly 1993 na assembly_contig_73 unplaced-scaffold na na JABVCQ010000073.1 = NZ_JABVCQ010000073.1 Primary Assembly 1794 na assembly_contig_74 unplaced-scaffold na na JABVCQ010000074.1 = NZ_JABVCQ010000074.1 Primary Assembly 1534 na assembly_contig_75 unplaced-scaffold na na JABVCQ010000075.1 = NZ_JABVCQ010000075.1 Primary Assembly 1397 na assembly_contig_76 unplaced-scaffold na na JABVCQ010000076.1 = NZ_JABVCQ010000076.1 Primary Assembly 1383 na assembly_contig_77 unplaced-scaffold na na JABVCQ010000077.1 = NZ_JABVCQ010000077.1 Primary Assembly 1334 na assembly_contig_78 unplaced-scaffold na na JABVCQ010000078.1 = NZ_JABVCQ010000078.1 Primary Assembly 1261 na assembly_contig_79 unplaced-scaffold na na JABVCQ010000079.1 = NZ_JABVCQ010000079.1 Primary Assembly 1144 na assembly_contig_80 unplaced-scaffold na na JABVCQ010000080.1 = NZ_JABVCQ010000080.1 Primary Assembly 1128 na assembly_contig_81 unplaced-scaffold na na JABVCQ010000081.1 = NZ_JABVCQ010000081.1 Primary Assembly 1113 na assembly_contig_82 unplaced-scaffold na na JABVCQ010000082.1 = NZ_JABVCQ010000082.1 Primary Assembly 1104 na assembly_contig_83 unplaced-scaffold na na JABVCQ010000083.1 = NZ_JABVCQ010000083.1 Primary Assembly 1086 na assembly_contig_84 unplaced-scaffold na na JABVCQ010000084.1 = NZ_JABVCQ010000084.1 Primary Assembly 1035 na assembly_contig_85 unplaced-scaffold na na JABVCQ010000085.1 = NZ_JABVCQ010000085.1 Primary Assembly 980 na assembly_contig_86 unplaced-scaffold na na JABVCQ010000086.1 = NZ_JABVCQ010000086.1 Primary Assembly 962 na assembly_contig_87 unplaced-scaffold na na JABVCQ010000087.1 = NZ_JABVCQ010000087.1 Primary Assembly 937 na assembly_contig_88 unplaced-scaffold na na JABVCQ010000088.1 = NZ_JABVCQ010000088.1 Primary Assembly 934 na assembly_contig_89 unplaced-scaffold na na JABVCQ010000089.1 = NZ_JABVCQ010000089.1 Primary Assembly 863 na assembly_contig_90 unplaced-scaffold na na JABVCQ010000090.1 = NZ_JABVCQ010000090.1 Primary Assembly 806 na assembly_contig_91 unplaced-scaffold na na JABVCQ010000091.1 = NZ_JABVCQ010000091.1 Primary Assembly 781 na assembly_contig_92 unplaced-scaffold na na JABVCQ010000092.1 = NZ_JABVCQ010000092.1 Primary Assembly 768 na assembly_contig_93 unplaced-scaffold na na JABVCQ010000093.1 = NZ_JABVCQ010000093.1 Primary Assembly 754 na assembly_contig_94 unplaced-scaffold na na JABVCQ010000094.1 = NZ_JABVCQ010000094.1 Primary Assembly 745 na assembly_contig_95 unplaced-scaffold na na JABVCQ010000095.1 = NZ_JABVCQ010000095.1 Primary Assembly 702 na assembly_contig_96 unplaced-scaffold na na JABVCQ010000096.1 = NZ_JABVCQ010000096.1 Primary Assembly 685 na assembly_contig_97 unplaced-scaffold na na JABVCQ010000097.1 = NZ_JABVCQ010000097.1 Primary Assembly 676 na assembly_contig_98 unplaced-scaffold na na JABVCQ010000098.1 = NZ_JABVCQ010000098.1 Primary Assembly 671 na assembly_contig_99 unplaced-scaffold na na JABVCQ010000099.1 = NZ_JABVCQ010000099.1 Primary Assembly 661 na assembly_contig_100 unplaced-scaffold na na JABVCQ010000100.1 = NZ_JABVCQ010000100.1 Primary Assembly 661 na assembly_contig_101 unplaced-scaffold na na JABVCQ010000101.1 = NZ_JABVCQ010000101.1 Primary Assembly 656 na assembly_contig_102 unplaced-scaffold na na JABVCQ010000102.1 = NZ_JABVCQ010000102.1 Primary Assembly 653 na assembly_contig_103 unplaced-scaffold na na JABVCQ010000103.1 = NZ_JABVCQ010000103.1 Primary Assembly 632 na assembly_contig_104 unplaced-scaffold na na JABVCQ010000104.1 = NZ_JABVCQ010000104.1 Primary Assembly 611 na assembly_contig_105 unplaced-scaffold na na JABVCQ010000105.1 = NZ_JABVCQ010000105.1 Primary Assembly 604 na assembly_contig_106 unplaced-scaffold na na JABVCQ010000106.1 = NZ_JABVCQ010000106.1 Primary Assembly 567 na assembly_contig_107 unplaced-scaffold na na JABVCQ010000107.1 = NZ_JABVCQ010000107.1 Primary Assembly 549 na assembly_contig_108 unplaced-scaffold na na JABVCQ010000108.1 = NZ_JABVCQ010000108.1 Primary Assembly 549 na assembly_contig_109 unplaced-scaffold na na JABVCQ010000109.1 = NZ_JABVCQ010000109.1 Primary Assembly 540 na assembly_contig_110 unplaced-scaffold na na JABVCQ010000110.1 = NZ_JABVCQ010000110.1 Primary Assembly 524 na assembly_contig_111 unplaced-scaffold na na JABVCQ010000111.1 = NZ_JABVCQ010000111.1 Primary Assembly 515 na assembly_contig_112 unplaced-scaffold na na JABVCQ010000112.1 = NZ_JABVCQ010000112.1 Primary Assembly 515 na assembly_contig_113 unplaced-scaffold na na JABVCQ010000113.1 = NZ_JABVCQ010000113.1 Primary Assembly 513 na assembly_contig_114 unplaced-scaffold na na JABVCQ010000114.1 = NZ_JABVCQ010000114.1 Primary Assembly 481 na assembly_contig_115 unplaced-scaffold na na JABVCQ010000115.1 = NZ_JABVCQ010000115.1 Primary Assembly 481 na assembly_contig_116 unplaced-scaffold na na JABVCQ010000116.1 = NZ_JABVCQ010000116.1 Primary Assembly 497 na assembly_contig_117 unplaced-scaffold na na JABVCQ010000117.1 = NZ_JABVCQ010000117.1 Primary Assembly 459 na assembly_contig_118 unplaced-scaffold na na JABVCQ010000118.1 = NZ_JABVCQ010000118.1 Primary Assembly 457 na assembly_contig_119 unplaced-scaffold na na JABVCQ010000119.1 = NZ_JABVCQ010000119.1 Primary Assembly 438 na assembly_contig_120 unplaced-scaffold na na JABVCQ010000120.1 = NZ_JABVCQ010000120.1 Primary Assembly 418 na assembly_contig_121 unplaced-scaffold na na JABVCQ010000121.1 = NZ_JABVCQ010000121.1 Primary Assembly 376 na assembly_contig_122 unplaced-scaffold na na JABVCQ010000122.1 = NZ_JABVCQ010000122.1 Primary Assembly 371 na assembly_contig_123 unplaced-scaffold na na JABVCQ010000123.1 = NZ_JABVCQ010000123.1 Primary Assembly 369 na assembly_contig_124 unplaced-scaffold na na JABVCQ010000124.1 = NZ_JABVCQ010000124.1 Primary Assembly 369 na assembly_contig_125 unplaced-scaffold na na JABVCQ010000125.1 = NZ_JABVCQ010000125.1 Primary Assembly 368 na assembly_contig_126 unplaced-scaffold na na JABVCQ010000126.1 = NZ_JABVCQ010000126.1 Primary Assembly 362 na assembly_contig_127 unplaced-scaffold na na JABVCQ010000127.1 = NZ_JABVCQ010000127.1 Primary Assembly 333 na assembly_contig_128 unplaced-scaffold na na JABVCQ010000128.1 = NZ_JABVCQ010000128.1 Primary Assembly 305 na