# Assembly name: ASM1473731v1 # Organism name: Treponema zioleckii (spirochetes) # Infraspecific name: strain=kT3 # Taxid: 331680 # BioSample: SAMN02950951 # BioProject: PRJNA257363 # Submitter: Institute of Animal Physiology, SAS # Date: 2020-09-24 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JPUF01 # Assembly method: Newbler v. NOV-2013 # Expected final version: yes # Genome coverage: 9.0x # Sequencing technology: 454 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_014737315.1 # RefSeq assembly accession: GCF_014737315.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_014737325.1 GCF_014737325.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig00139 unlocalized-scaffold pkT3 Plasmid JPUF01000139.1 = NZ_JPUF01000139.1 Primary Assembly 1555 na contig00001 unplaced-scaffold na na JPUF01000001.1 = NZ_JPUF01000001.1 Primary Assembly 189940 na contig00002 unplaced-scaffold na na JPUF01000002.1 = NZ_JPUF01000002.1 Primary Assembly 148659 na contig00003 unplaced-scaffold na na JPUF01000003.1 = NZ_JPUF01000003.1 Primary Assembly 123979 na contig00004 unplaced-scaffold na na JPUF01000004.1 = NZ_JPUF01000004.1 Primary Assembly 84108 na contig00005 unplaced-scaffold na na JPUF01000005.1 = NZ_JPUF01000005.1 Primary Assembly 76755 na contig00006 unplaced-scaffold na na JPUF01000006.1 = NZ_JPUF01000006.1 Primary Assembly 76588 na contig00007 unplaced-scaffold na na JPUF01000007.1 = NZ_JPUF01000007.1 Primary Assembly 75316 na contig00008 unplaced-scaffold na na JPUF01000008.1 = NZ_JPUF01000008.1 Primary Assembly 74777 na contig00009 unplaced-scaffold na na JPUF01000009.1 = NZ_JPUF01000009.1 Primary Assembly 74638 na contig00010 unplaced-scaffold na na JPUF01000010.1 = NZ_JPUF01000010.1 Primary Assembly 72513 na contig00011 unplaced-scaffold na na JPUF01000011.1 = NZ_JPUF01000011.1 Primary Assembly 63673 na contig00012 unplaced-scaffold na na JPUF01000012.1 = NZ_JPUF01000012.1 Primary Assembly 61925 na contig00013 unplaced-scaffold na na JPUF01000013.1 = NZ_JPUF01000013.1 Primary Assembly 61713 na contig00014 unplaced-scaffold na na JPUF01000014.1 = NZ_JPUF01000014.1 Primary Assembly 61695 na contig00015 unplaced-scaffold na na JPUF01000015.1 = NZ_JPUF01000015.1 Primary Assembly 59652 na contig00016 unplaced-scaffold na na JPUF01000016.1 = NZ_JPUF01000016.1 Primary Assembly 58371 na contig00017 unplaced-scaffold na na JPUF01000017.1 = NZ_JPUF01000017.1 Primary Assembly 58069 na contig00018 unplaced-scaffold na na JPUF01000018.1 = NZ_JPUF01000018.1 Primary Assembly 57997 na contig00019 unplaced-scaffold na na JPUF01000019.1 = NZ_JPUF01000019.1 Primary Assembly 57208 na contig00020 unplaced-scaffold na na JPUF01000020.1 = NZ_JPUF01000020.1 Primary Assembly 55897 na contig00021 unplaced-scaffold na na JPUF01000021.1 = NZ_JPUF01000021.1 Primary Assembly 55539 na contig00022 unplaced-scaffold na na JPUF01000022.1 = NZ_JPUF01000022.1 Primary Assembly 54496 na contig00023 unplaced-scaffold na na JPUF01000023.1 = NZ_JPUF01000023.1 Primary Assembly 51629 na contig00024 unplaced-scaffold na na JPUF01000024.1 = NZ_JPUF01000024.1 Primary Assembly 51481 na contig00025 unplaced-scaffold na na JPUF01000025.1 = NZ_JPUF01000025.1 Primary Assembly 49668 na contig00026 unplaced-scaffold na na JPUF01000026.1 = NZ_JPUF01000026.1 Primary Assembly 49487 na contig00027 unplaced-scaffold na na JPUF01000027.1 = NZ_JPUF01000027.1 Primary Assembly 48452 na contig00028 unplaced-scaffold na na JPUF01000028.1 = NZ_JPUF01000028.1 Primary Assembly 47562 na contig00029 unplaced-scaffold na na JPUF01000029.1 = NZ_JPUF01000029.1 Primary Assembly 47246 na contig00030 unplaced-scaffold na na JPUF01000030.1 = NZ_JPUF01000030.1 Primary Assembly 47198 na contig00031 unplaced-scaffold na na JPUF01000031.1 = NZ_JPUF01000031.1 Primary Assembly 46371 na contig00032 unplaced-scaffold na na JPUF01000032.1 = NZ_JPUF01000032.1 Primary Assembly 44987 na contig00033 unplaced-scaffold na na JPUF01000033.1 = NZ_JPUF01000033.1 Primary Assembly 44278 na contig00034 unplaced-scaffold na na JPUF01000034.1 = NZ_JPUF01000034.1 Primary Assembly 43693 na contig00035 unplaced-scaffold na na JPUF01000035.1 = NZ_JPUF01000035.1 Primary Assembly 43494 na contig00036 unplaced-scaffold na na JPUF01000036.1 = NZ_JPUF01000036.1 Primary Assembly 43140 na contig00037 unplaced-scaffold na na JPUF01000037.1 = NZ_JPUF01000037.1 Primary Assembly 42764 na contig00038 unplaced-scaffold na na JPUF01000038.1 = NZ_JPUF01000038.1 Primary Assembly 39280 na contig00039 unplaced-scaffold na na JPUF01000039.1 = NZ_JPUF01000039.1 Primary Assembly 38306 na contig00040 unplaced-scaffold na na JPUF01000040.1 = NZ_JPUF01000040.1 Primary Assembly 36156 na contig00041 unplaced-scaffold na na JPUF01000041.1 = NZ_JPUF01000041.1 Primary Assembly 35385 na contig00042 unplaced-scaffold na na JPUF01000042.1 = NZ_JPUF01000042.1 Primary Assembly 35065 na contig00043 unplaced-scaffold na na JPUF01000043.1 = NZ_JPUF01000043.1 Primary Assembly 34529 na contig00044 unplaced-scaffold na na JPUF01000044.1 = NZ_JPUF01000044.1 Primary Assembly 32999 na contig00045 unplaced-scaffold na na JPUF01000045.1 = NZ_JPUF01000045.1 Primary Assembly 32408 na contig00046 unplaced-scaffold na na JPUF01000046.1 = NZ_JPUF01000046.1 Primary Assembly 32161 na contig00047 unplaced-scaffold na na JPUF01000047.1 = NZ_JPUF01000047.1 Primary Assembly 32057 na contig00048 unplaced-scaffold na na JPUF01000048.1 = NZ_JPUF01000048.1 Primary Assembly 31559 na contig00049 unplaced-scaffold na na JPUF01000049.1 = NZ_JPUF01000049.1 Primary Assembly 30935 na contig00050 unplaced-scaffold na na JPUF01000050.1 = NZ_JPUF01000050.1 Primary Assembly 30666 na contig00051 unplaced-scaffold na na JPUF01000051.1 = NZ_JPUF01000051.1 Primary Assembly 28844 na contig00052 unplaced-scaffold na na JPUF01000052.1 = NZ_JPUF01000052.1 Primary Assembly 28443 na contig00053 unplaced-scaffold na na JPUF01000053.1 = NZ_JPUF01000053.1 Primary Assembly 27080 na contig00054 unplaced-scaffold na na JPUF01000054.1 = NZ_JPUF01000054.1 Primary Assembly 26902 na contig00055 unplaced-scaffold na na JPUF01000055.1 = NZ_JPUF01000055.1 Primary Assembly 26069 na contig00056 unplaced-scaffold na na JPUF01000056.1 = NZ_JPUF01000056.1 Primary Assembly 25895 na contig00057 unplaced-scaffold na na JPUF01000057.1 = NZ_JPUF01000057.1 Primary Assembly 25685 na contig00058 unplaced-scaffold na na JPUF01000058.1 = NZ_JPUF01000058.1 Primary Assembly 25652 na contig00059 unplaced-scaffold na na JPUF01000059.1 = NZ_JPUF01000059.1 Primary Assembly 24489 na contig00060 unplaced-scaffold na na JPUF01000060.1 = NZ_JPUF01000060.1 Primary Assembly 24438 na contig00061 unplaced-scaffold na na JPUF01000061.1 = NZ_JPUF01000061.1 Primary Assembly 24204 na contig00062 unplaced-scaffold na na JPUF01000062.1 = NZ_JPUF01000062.1 Primary Assembly 23407 na contig00063 unplaced-scaffold na na JPUF01000063.1 = NZ_JPUF01000063.1 Primary Assembly 23121 na contig00064 unplaced-scaffold na na JPUF01000064.1 = NZ_JPUF01000064.1 Primary Assembly 23072 na contig00065 unplaced-scaffold na na JPUF01000065.1 = NZ_JPUF01000065.1 Primary Assembly 21971 na contig00066 unplaced-scaffold na na JPUF01000066.1 = NZ_JPUF01000066.1 Primary Assembly 21856 na contig00067 unplaced-scaffold na na JPUF01000067.1 = NZ_JPUF01000067.1 Primary Assembly 21617 na contig00068 unplaced-scaffold na na JPUF01000068.1 = NZ_JPUF01000068.1 Primary Assembly 20903 na contig00069 unplaced-scaffold na na JPUF01000069.1 = NZ_JPUF01000069.1 Primary Assembly 20741 na contig00070 unplaced-scaffold na na JPUF01000070.1 = NZ_JPUF01000070.1 Primary Assembly 20492 na contig00071 unplaced-scaffold na na JPUF01000071.1 = NZ_JPUF01000071.1 Primary Assembly 20041 na contig00072 unplaced-scaffold na na JPUF01000072.1 = NZ_JPUF01000072.1 Primary Assembly 19259 na contig00073 unplaced-scaffold na na JPUF01000073.1 = NZ_JPUF01000073.1 Primary Assembly 19147 na contig00074 unplaced-scaffold na na JPUF01000074.1 = NZ_JPUF01000074.1 Primary Assembly 18779 na contig00075 unplaced-scaffold na na JPUF01000075.1 = NZ_JPUF01000075.1 Primary Assembly 16983 na contig00076 unplaced-scaffold na na JPUF01000076.1 = NZ_JPUF01000076.1 Primary Assembly 16485 na contig00077 unplaced-scaffold na na JPUF01000077.1 = NZ_JPUF01000077.1 Primary Assembly 16010 na contig00078 unplaced-scaffold na na JPUF01000078.1 = NZ_JPUF01000078.1 Primary Assembly 15233 na contig00079 unplaced-scaffold na na JPUF01000079.1 = NZ_JPUF01000079.1 Primary Assembly 14881 na contig00080 unplaced-scaffold na na JPUF01000080.1 = NZ_JPUF01000080.1 Primary Assembly 14804 na contig00081 unplaced-scaffold na na JPUF01000081.1 = NZ_JPUF01000081.1 Primary Assembly 14770 na contig00082 unplaced-scaffold na na JPUF01000082.1 = NZ_JPUF01000082.1 Primary Assembly 14613 na contig00083 unplaced-scaffold na na JPUF01000083.1 = NZ_JPUF01000083.1 Primary Assembly 14463 na contig00084 unplaced-scaffold na na JPUF01000084.1 = NZ_JPUF01000084.1 Primary Assembly 13890 na contig00085 unplaced-scaffold na na JPUF01000085.1 = NZ_JPUF01000085.1 Primary Assembly 13415 na contig00086 unplaced-scaffold na na JPUF01000086.1 = NZ_JPUF01000086.1 Primary Assembly 12898 na contig00087 unplaced-scaffold na na JPUF01000087.1 = NZ_JPUF01000087.1 Primary Assembly 12732 na contig00088 unplaced-scaffold na na JPUF01000088.1 = NZ_JPUF01000088.1 Primary Assembly 12345 na contig00089 unplaced-scaffold na na JPUF01000089.1 = NZ_JPUF01000089.1 Primary Assembly 12227 na contig00090 unplaced-scaffold na na JPUF01000090.1 = NZ_JPUF01000090.1 Primary Assembly 10486 na contig00091 unplaced-scaffold na na JPUF01000091.1 = NZ_JPUF01000091.1 Primary Assembly 10458 na contig00092 unplaced-scaffold na na JPUF01000092.1 = NZ_JPUF01000092.1 Primary Assembly 9489 na contig00093 unplaced-scaffold na na JPUF01000093.1 = NZ_JPUF01000093.1 Primary Assembly 8458 na contig00094 unplaced-scaffold na na JPUF01000094.1 = NZ_JPUF01000094.1 Primary Assembly 8329 na contig00095 unplaced-scaffold na na JPUF01000095.1 = NZ_JPUF01000095.1 Primary Assembly 7715 na contig00096 unplaced-scaffold na na JPUF01000096.1 = NZ_JPUF01000096.1 Primary Assembly 7499 na contig00097 unplaced-scaffold na na JPUF01000097.1 = NZ_JPUF01000097.1 Primary Assembly 7367 na contig00098 unplaced-scaffold na na JPUF01000098.1 = NZ_JPUF01000098.1 Primary Assembly 7278 na contig00099 unplaced-scaffold na na JPUF01000099.1 = NZ_JPUF01000099.1 Primary Assembly 6365 na contig00100 unplaced-scaffold na na JPUF01000100.1 = NZ_JPUF01000100.1 Primary Assembly 6221 na contig00101 unplaced-scaffold na na JPUF01000101.1 = NZ_JPUF01000101.1 Primary Assembly 5489 na contig00102 unplaced-scaffold na na JPUF01000102.1 = NZ_JPUF01000102.1 Primary Assembly 5482 na contig00103 unplaced-scaffold na na JPUF01000103.1 = NZ_JPUF01000103.1 Primary Assembly 5425 na contig00104 unplaced-scaffold na na JPUF01000104.1 = NZ_JPUF01000104.1 Primary Assembly 5225 na contig00105 unplaced-scaffold na na JPUF01000105.1 = NZ_JPUF01000105.1 Primary Assembly 5205 na contig00106 unplaced-scaffold na na JPUF01000106.1 = NZ_JPUF01000106.1 Primary Assembly 5191 na contig00107 unplaced-scaffold na na JPUF01000107.1 = NZ_JPUF01000107.1 Primary Assembly 4983 na contig00108 unplaced-scaffold na na JPUF01000108.1 = NZ_JPUF01000108.1 Primary Assembly 4948 na contig00109 unplaced-scaffold na na JPUF01000109.1 = NZ_JPUF01000109.1 Primary Assembly 4777 na contig00110 unplaced-scaffold na na JPUF01000110.1 = NZ_JPUF01000110.1 Primary Assembly 4663 na contig00111 unplaced-scaffold na na JPUF01000111.1 = NZ_JPUF01000111.1 Primary Assembly 4571 na contig00112 unplaced-scaffold na na JPUF01000112.1 = NZ_JPUF01000112.1 Primary Assembly 4390 na contig00113 unplaced-scaffold na na JPUF01000113.1 = NZ_JPUF01000113.1 Primary Assembly 4293 na contig00114 unplaced-scaffold na na JPUF01000114.1 = NZ_JPUF01000114.1 Primary Assembly 4246 na contig00115 unplaced-scaffold na na JPUF01000115.1 = NZ_JPUF01000115.1 Primary Assembly 4095 na contig00116 unplaced-scaffold na na JPUF01000116.1 = NZ_JPUF01000116.1 Primary Assembly 3784 na contig00117 unplaced-scaffold na na JPUF01000117.1 = NZ_JPUF01000117.1 Primary Assembly 3656 na contig00118 unplaced-scaffold na na JPUF01000118.1 = NZ_JPUF01000118.1 Primary Assembly 3600 na contig00119 unplaced-scaffold na na JPUF01000119.1 = NZ_JPUF01000119.1 Primary Assembly 3586 na contig00120 unplaced-scaffold na na JPUF01000120.1 = NZ_JPUF01000120.1 Primary Assembly 3592 na contig00121 unplaced-scaffold na na JPUF01000121.1 = NZ_JPUF01000121.1 Primary Assembly 3569 na contig00122 unplaced-scaffold na na JPUF01000122.1 = NZ_JPUF01000122.1 Primary Assembly 3241 na contig00123 unplaced-scaffold na na JPUF01000123.1 = NZ_JPUF01000123.1 Primary Assembly 3203 na contig00124 unplaced-scaffold na na JPUF01000124.1 = NZ_JPUF01000124.1 Primary Assembly 3186 na contig00125 unplaced-scaffold na na JPUF01000125.1 = NZ_JPUF01000125.1 Primary Assembly 3184 na contig00126 unplaced-scaffold na na JPUF01000126.1 = NZ_JPUF01000126.1 Primary Assembly 2974 na contig00127 unplaced-scaffold na na JPUF01000127.1 = NZ_JPUF01000127.1 Primary Assembly 2410 na contig00128 unplaced-scaffold na na JPUF01000128.1 = NZ_JPUF01000128.1 Primary Assembly 2395 na contig00129 unplaced-scaffold na na JPUF01000129.1 = NZ_JPUF01000129.1 Primary Assembly 2296 na contig00130 unplaced-scaffold na na JPUF01000130.1 = NZ_JPUF01000130.1 Primary Assembly 2213 na contig00131 unplaced-scaffold na na JPUF01000131.1 = NZ_JPUF01000131.1 Primary Assembly 2160 na contig00132 unplaced-scaffold na na JPUF01000132.1 = NZ_JPUF01000132.1 Primary Assembly 2117 na contig00133 unplaced-scaffold na na JPUF01000133.1 = NZ_JPUF01000133.1 Primary Assembly 2079 na contig00134 unplaced-scaffold na na JPUF01000134.1 = NZ_JPUF01000134.1 Primary Assembly 1949 na contig00135 unplaced-scaffold na na JPUF01000135.1 = NZ_JPUF01000135.1 Primary Assembly 1849 na contig00136 unplaced-scaffold na na JPUF01000136.1 = NZ_JPUF01000136.1 Primary Assembly 1805 na contig00137 unplaced-scaffold na na JPUF01000137.1 = NZ_JPUF01000137.1 Primary Assembly 1718 na contig00138 unplaced-scaffold na na JPUF01000138.1 = NZ_JPUF01000138.1 Primary Assembly 1597 na contig00140 unplaced-scaffold na na JPUF01000140.1 = NZ_JPUF01000140.1 Primary Assembly 1479 na contig00141 unplaced-scaffold na na JPUF01000141.1 = NZ_JPUF01000141.1 Primary Assembly 1404 na contig00142 unplaced-scaffold na na JPUF01000142.1 = NZ_JPUF01000142.1 Primary Assembly 1406 na contig00143 unplaced-scaffold na na JPUF01000143.1 = NZ_JPUF01000143.1 Primary Assembly 1371 na contig00144 unplaced-scaffold na na JPUF01000144.1 = NZ_JPUF01000144.1 Primary Assembly 1358 na contig00145 unplaced-scaffold na na JPUF01000145.1 = NZ_JPUF01000145.1 Primary Assembly 1302 na contig00146 unplaced-scaffold na na JPUF01000146.1 = NZ_JPUF01000146.1 Primary Assembly 1281 na contig00147 unplaced-scaffold na na JPUF01000147.1 = NZ_JPUF01000147.1 Primary Assembly 1205 na contig00148 unplaced-scaffold na na JPUF01000148.1 = NZ_JPUF01000148.1 Primary Assembly 1167 na contig00149 unplaced-scaffold na na JPUF01000149.1 = NZ_JPUF01000149.1 Primary Assembly 917 na contig00150 unplaced-scaffold na na JPUF01000150.1 = NZ_JPUF01000150.1 Primary Assembly 890 na contig00151 unplaced-scaffold na na JPUF01000151.1 = NZ_JPUF01000151.1 Primary Assembly 869 na contig00152 unplaced-scaffold na na JPUF01000152.1 = NZ_JPUF01000152.1 Primary Assembly 857 na contig00153 unplaced-scaffold na na JPUF01000153.1 = NZ_JPUF01000153.1 Primary Assembly 821 na contig00154 unplaced-scaffold na na JPUF01000154.1 = NZ_JPUF01000154.1 Primary Assembly 820 na contig00155 unplaced-scaffold na na JPUF01000155.1 = NZ_JPUF01000155.1 Primary Assembly 807 na contig00156 unplaced-scaffold na na JPUF01000156.1 = NZ_JPUF01000156.1 Primary Assembly 755 na contig00157 unplaced-scaffold na na JPUF01000157.1 = NZ_JPUF01000157.1 Primary Assembly 725 na contig00158 unplaced-scaffold na na JPUF01000158.1 = NZ_JPUF01000158.1 Primary Assembly 677 na contig00159 unplaced-scaffold na na JPUF01000159.1 = NZ_JPUF01000159.1 Primary Assembly 665 na contig00160 unplaced-scaffold na na JPUF01000160.1 = NZ_JPUF01000160.1 Primary Assembly 626 na contig00161 unplaced-scaffold na na JPUF01000161.1 = NZ_JPUF01000161.1 Primary Assembly 611 na contig00162 unplaced-scaffold na na JPUF01000162.1 = NZ_JPUF01000162.1 Primary Assembly 609 na contig00163 unplaced-scaffold na na JPUF01000163.1 = NZ_JPUF01000163.1 Primary Assembly 564 na contig00164 unplaced-scaffold na na JPUF01000164.1 = NZ_JPUF01000164.1 Primary Assembly 541 na contig00165 unplaced-scaffold na na JPUF01000165.1 = NZ_JPUF01000165.1 Primary Assembly 514 na contig00166 unplaced-scaffold na na JPUF01000166.1 = NZ_JPUF01000166.1 Primary Assembly 512 na contig00167 unplaced-scaffold na na JPUF01000167.1 = NZ_JPUF01000167.1 Primary Assembly 511 na contig00168 unplaced-scaffold na na JPUF01000168.1 = NZ_JPUF01000168.1 Primary Assembly 504 na contig00169 unplaced-scaffold na na JPUF01000169.1 = NZ_JPUF01000169.1 Primary Assembly 503 na