# Assembly name: ASM1603163v1 # Organism name: Bradyrhizobium diversitatis (a-proteobacteria) # Infraspecific name: strain=CNPSo 4019 # Taxid: 2755406 # BioSample: SAMN15581659 # BioProject: PRJNA647297 # Submitter: Empresa Brasileira de Pesquisa Agropecuaria # Date: 2020-12-14 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JACEGD01 # Assembly method: A5-miseq pipeline (de novo) v. 20140604 # Expected final version: yes # Genome coverage: 94.0x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_016031635.1 # RefSeq assembly accession: GCF_016031635.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_016031705.1 GCF_016031705.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_0 unplaced-scaffold na na JACEGD010000001.1 = NZ_JACEGD010000001.1 Primary Assembly 338314 na scaffold_1 unplaced-scaffold na na JACEGD010000002.1 = NZ_JACEGD010000002.1 Primary Assembly 335519 na scaffold_2 unplaced-scaffold na na JACEGD010000003.1 = NZ_JACEGD010000003.1 Primary Assembly 266284 na scaffold_3 unplaced-scaffold na na JACEGD010000004.1 = NZ_JACEGD010000004.1 Primary Assembly 265063 na scaffold_4 unplaced-scaffold na na JACEGD010000005.1 = NZ_JACEGD010000005.1 Primary Assembly 295865 na scaffold_5 unplaced-scaffold na na JACEGD010000006.1 = NZ_JACEGD010000006.1 Primary Assembly 328108 na scaffold_6 unplaced-scaffold na na JACEGD010000007.1 = NZ_JACEGD010000007.1 Primary Assembly 217607 na scaffold_7 unplaced-scaffold na na JACEGD010000008.1 = NZ_JACEGD010000008.1 Primary Assembly 270666 na scaffold_8 unplaced-scaffold na na JACEGD010000009.1 = NZ_JACEGD010000009.1 Primary Assembly 198871 na scaffold_9 unplaced-scaffold na na JACEGD010000010.1 = NZ_JACEGD010000010.1 Primary Assembly 190583 na scaffold_10 unplaced-scaffold na na JACEGD010000011.1 = NZ_JACEGD010000011.1 Primary Assembly 422581 na scaffold_11 unplaced-scaffold na na JACEGD010000012.1 = NZ_JACEGD010000012.1 Primary Assembly 302043 na scaffold_12 unplaced-scaffold na na JACEGD010000013.1 = NZ_JACEGD010000013.1 Primary Assembly 196233 na scaffold_13 unplaced-scaffold na na JACEGD010000014.1 = NZ_JACEGD010000014.1 Primary Assembly 160002 na scaffold_14 unplaced-scaffold na na JACEGD010000015.1 = NZ_JACEGD010000015.1 Primary Assembly 248485 na scaffold_15 unplaced-scaffold na na JACEGD010000016.1 = NZ_JACEGD010000016.1 Primary Assembly 213493 na scaffold_16 unplaced-scaffold na na JACEGD010000017.1 = NZ_JACEGD010000017.1 Primary Assembly 204462 na scaffold_17 unplaced-scaffold na na JACEGD010000018.1 = NZ_JACEGD010000018.1 Primary Assembly 134215 na scaffold_18 unplaced-scaffold na na JACEGD010000019.1 = NZ_JACEGD010000019.1 Primary Assembly 278546 na scaffold_19 unplaced-scaffold na na JACEGD010000020.1 = NZ_JACEGD010000020.1 Primary Assembly 127774 na scaffold_20 unplaced-scaffold na na JACEGD010000021.1 = NZ_JACEGD010000021.1 Primary Assembly 224417 na scaffold_21 unplaced-scaffold na na JACEGD010000022.1 = NZ_JACEGD010000022.1 Primary Assembly 120279 na scaffold_22 unplaced-scaffold na na JACEGD010000023.1 = NZ_JACEGD010000023.1 Primary Assembly 98625 na scaffold_23 unplaced-scaffold na na JACEGD010000024.1 = NZ_JACEGD010000024.1 Primary Assembly 128892 na scaffold_24 unplaced-scaffold na na JACEGD010000025.1 = NZ_JACEGD010000025.1 Primary Assembly 95385 na scaffold_25 unplaced-scaffold na na JACEGD010000026.1 = NZ_JACEGD010000026.1 Primary Assembly 94611 na scaffold_26 unplaced-scaffold na na JACEGD010000027.1 = NZ_JACEGD010000027.1 Primary Assembly 162817 na scaffold_27 unplaced-scaffold na na JACEGD010000028.1 = NZ_JACEGD010000028.1 Primary Assembly 96728 na scaffold_28 unplaced-scaffold na na JACEGD010000029.1 = NZ_JACEGD010000029.1 Primary Assembly 81478 na scaffold_29 unplaced-scaffold na na JACEGD010000030.1 = NZ_JACEGD010000030.1 Primary Assembly 181504 na scaffold_30 unplaced-scaffold na na JACEGD010000031.1 = NZ_JACEGD010000031.1 Primary Assembly 124587 na scaffold_31 unplaced-scaffold na na JACEGD010000032.1 = NZ_JACEGD010000032.1 Primary Assembly 70737 na scaffold_32 unplaced-scaffold na na JACEGD010000033.1 = NZ_JACEGD010000033.1 Primary Assembly 66654 na scaffold_33 unplaced-scaffold na na JACEGD010000034.1 = NZ_JACEGD010000034.1 Primary Assembly 65721 na scaffold_34 unplaced-scaffold na na JACEGD010000035.1 = NZ_JACEGD010000035.1 Primary Assembly 63998 na scaffold_35 unplaced-scaffold na na JACEGD010000036.1 = NZ_JACEGD010000036.1 Primary Assembly 62254 na scaffold_36 unplaced-scaffold na na JACEGD010000037.1 = NZ_JACEGD010000037.1 Primary Assembly 61715 na scaffold_37 unplaced-scaffold na na JACEGD010000038.1 = NZ_JACEGD010000038.1 Primary Assembly 57367 na scaffold_38 unplaced-scaffold na na JACEGD010000039.1 = NZ_JACEGD010000039.1 Primary Assembly 56445 na scaffold_39 unplaced-scaffold na na JACEGD010000040.1 = NZ_JACEGD010000040.1 Primary Assembly 194765 na scaffold_40 unplaced-scaffold na na JACEGD010000041.1 = NZ_JACEGD010000041.1 Primary Assembly 53300 na scaffold_41 unplaced-scaffold na na JACEGD010000042.1 = NZ_JACEGD010000042.1 Primary Assembly 55265 na scaffold_42 unplaced-scaffold na na JACEGD010000043.1 = NZ_JACEGD010000043.1 Primary Assembly 75738 na scaffold_43 unplaced-scaffold na na JACEGD010000044.1 = NZ_JACEGD010000044.1 Primary Assembly 48981 na scaffold_44 unplaced-scaffold na na JACEGD010000045.1 = NZ_JACEGD010000045.1 Primary Assembly 48653 na scaffold_45 unplaced-scaffold na na JACEGD010000046.1 = NZ_JACEGD010000046.1 Primary Assembly 47927 na scaffold_46 unplaced-scaffold na na JACEGD010000047.1 = NZ_JACEGD010000047.1 Primary Assembly 45817 na scaffold_47 unplaced-scaffold na na JACEGD010000048.1 = NZ_JACEGD010000048.1 Primary Assembly 63107 na scaffold_48 unplaced-scaffold na na JACEGD010000049.1 = NZ_JACEGD010000049.1 Primary Assembly 43940 na scaffold_49 unplaced-scaffold na na JACEGD010000050.1 = NZ_JACEGD010000050.1 Primary Assembly 40426 na scaffold_50 unplaced-scaffold na na JACEGD010000051.1 = NZ_JACEGD010000051.1 Primary Assembly 37304 na scaffold_51 unplaced-scaffold na na JACEGD010000052.1 = NZ_JACEGD010000052.1 Primary Assembly 41291 na scaffold_52 unplaced-scaffold na na JACEGD010000053.1 = NZ_JACEGD010000053.1 Primary Assembly 37075 na scaffold_53 unplaced-scaffold na na JACEGD010000054.1 = NZ_JACEGD010000054.1 Primary Assembly 36816 na scaffold_54 unplaced-scaffold na na JACEGD010000055.1 = NZ_JACEGD010000055.1 Primary Assembly 39095 na scaffold_55 unplaced-scaffold na na JACEGD010000056.1 = NZ_JACEGD010000056.1 Primary Assembly 31687 na scaffold_56 unplaced-scaffold na na JACEGD010000057.1 = NZ_JACEGD010000057.1 Primary Assembly 29819 na scaffold_57 unplaced-scaffold na na JACEGD010000058.1 = NZ_JACEGD010000058.1 Primary Assembly 27077 na scaffold_58 unplaced-scaffold na na JACEGD010000059.1 = NZ_JACEGD010000059.1 Primary Assembly 26468 na scaffold_59 unplaced-scaffold na na JACEGD010000060.1 = NZ_JACEGD010000060.1 Primary Assembly 26241 na scaffold_60 unplaced-scaffold na na JACEGD010000061.1 = NZ_JACEGD010000061.1 Primary Assembly 26059 na scaffold_61 unplaced-scaffold na na JACEGD010000062.1 = NZ_JACEGD010000062.1 Primary Assembly 51659 na scaffold_62 unplaced-scaffold na na JACEGD010000063.1 = NZ_JACEGD010000063.1 Primary Assembly 25108 na scaffold_63 unplaced-scaffold na na JACEGD010000064.1 = NZ_JACEGD010000064.1 Primary Assembly 24913 na scaffold_64 unplaced-scaffold na na JACEGD010000065.1 = NZ_JACEGD010000065.1 Primary Assembly 21203 na scaffold_65 unplaced-scaffold na na JACEGD010000066.1 = NZ_JACEGD010000066.1 Primary Assembly 20337 na scaffold_66 unplaced-scaffold na na JACEGD010000067.1 = NZ_JACEGD010000067.1 Primary Assembly 18142 na scaffold_67 unplaced-scaffold na na JACEGD010000068.1 = NZ_JACEGD010000068.1 Primary Assembly 17445 na scaffold_68 unplaced-scaffold na na JACEGD010000069.1 = NZ_JACEGD010000069.1 Primary Assembly 17227 na scaffold_69 unplaced-scaffold na na JACEGD010000070.1 = NZ_JACEGD010000070.1 Primary Assembly 16879 na scaffold_70 unplaced-scaffold na na JACEGD010000071.1 = NZ_JACEGD010000071.1 Primary Assembly 17578 na scaffold_71 unplaced-scaffold na na JACEGD010000072.1 = NZ_JACEGD010000072.1 Primary Assembly 15343 na scaffold_72 unplaced-scaffold na na JACEGD010000073.1 = NZ_JACEGD010000073.1 Primary Assembly 14822 na scaffold_73 unplaced-scaffold na na JACEGD010000074.1 = NZ_JACEGD010000074.1 Primary Assembly 17653 na scaffold_74 unplaced-scaffold na na JACEGD010000075.1 = NZ_JACEGD010000075.1 Primary Assembly 14554 na scaffold_75 unplaced-scaffold na na JACEGD010000076.1 = NZ_JACEGD010000076.1 Primary Assembly 13275 na scaffold_76 unplaced-scaffold na na JACEGD010000077.1 = NZ_JACEGD010000077.1 Primary Assembly 14578 na scaffold_77 unplaced-scaffold na na JACEGD010000078.1 = NZ_JACEGD010000078.1 Primary Assembly 12291 na scaffold_78 unplaced-scaffold na na JACEGD010000079.1 = NZ_JACEGD010000079.1 Primary Assembly 11910 na scaffold_79 unplaced-scaffold na na JACEGD010000080.1 = NZ_JACEGD010000080.1 Primary Assembly 10358 na scaffold_80 unplaced-scaffold na na JACEGD010000081.1 = NZ_JACEGD010000081.1 Primary Assembly 8584 na scaffold_81 unplaced-scaffold na na JACEGD010000082.1 = NZ_JACEGD010000082.1 Primary Assembly 13111 na scaffold_82 unplaced-scaffold na na JACEGD010000083.1 = NZ_JACEGD010000083.1 Primary Assembly 12757 na scaffold_83 unplaced-scaffold na na JACEGD010000084.1 = NZ_JACEGD010000084.1 Primary Assembly 9582 na scaffold_84 unplaced-scaffold na na JACEGD010000085.1 = NZ_JACEGD010000085.1 Primary Assembly 5992 na scaffold_85 unplaced-scaffold na na JACEGD010000086.1 = NZ_JACEGD010000086.1 Primary Assembly 5664 na scaffold_86 unplaced-scaffold na na JACEGD010000087.1 = NZ_JACEGD010000087.1 Primary Assembly 5453 na scaffold_87 unplaced-scaffold na na JACEGD010000088.1 = NZ_JACEGD010000088.1 Primary Assembly 3296 na scaffold_88 unplaced-scaffold na na JACEGD010000089.1 = NZ_JACEGD010000089.1 Primary Assembly 3201 na scaffold_89 unplaced-scaffold na na JACEGD010000090.1 = NZ_JACEGD010000090.1 Primary Assembly 2926 na scaffold_90 unplaced-scaffold na na JACEGD010000091.1 = NZ_JACEGD010000091.1 Primary Assembly 2647 na scaffold_91 unplaced-scaffold na na JACEGD010000092.1 = NZ_JACEGD010000092.1 Primary Assembly 2246 na scaffold_92 unplaced-scaffold na na JACEGD010000093.1 = NZ_JACEGD010000093.1 Primary Assembly 1701 na scaffold_93 unplaced-scaffold na na JACEGD010000094.1 = NZ_JACEGD010000094.1 Primary Assembly 1640 na scaffold_94 unplaced-scaffold na na JACEGD010000095.1 = NZ_JACEGD010000095.1 Primary Assembly 1439 na scaffold_95 unplaced-scaffold na na JACEGD010000096.1 = NZ_JACEGD010000096.1 Primary Assembly 1353 na scaffold_96 unplaced-scaffold na na JACEGD010000097.1 = NZ_JACEGD010000097.1 Primary Assembly 1334 na scaffold_97 unplaced-scaffold na na JACEGD010000098.1 = NZ_JACEGD010000098.1 Primary Assembly 1270 na scaffold_98 unplaced-scaffold na na JACEGD010000099.1 = NZ_JACEGD010000099.1 Primary Assembly 1268 na scaffold_99 unplaced-scaffold na na JACEGD010000100.1 = NZ_JACEGD010000100.1 Primary Assembly 1259 na scaffold_100 unplaced-scaffold na na JACEGD010000101.1 = NZ_JACEGD010000101.1 Primary Assembly 1123 na scaffold_101 unplaced-scaffold na na JACEGD010000102.1 = NZ_JACEGD010000102.1 Primary Assembly 846 na scaffold_102 unplaced-scaffold na na JACEGD010000103.1 = NZ_JACEGD010000103.1 Primary Assembly 796 na scaffold_103 unplaced-scaffold na na JACEGD010000104.1 = NZ_JACEGD010000104.1 Primary Assembly 763 na scaffold_104 unplaced-scaffold na na JACEGD010000105.1 = NZ_JACEGD010000105.1 Primary Assembly 740 na scaffold_105 unplaced-scaffold na na JACEGD010000106.1 = NZ_JACEGD010000106.1 Primary Assembly 731 na scaffold_106 unplaced-scaffold na na JACEGD010000107.1 = NZ_JACEGD010000107.1 Primary Assembly 727 na scaffold_107 unplaced-scaffold na na JACEGD010000108.1 = NZ_JACEGD010000108.1 Primary Assembly 721 na scaffold_108 unplaced-scaffold na na JACEGD010000109.1 = NZ_JACEGD010000109.1 Primary Assembly 694 na scaffold_109 unplaced-scaffold na na JACEGD010000110.1 = NZ_JACEGD010000110.1 Primary Assembly 692 na scaffold_110 unplaced-scaffold na na JACEGD010000111.1 = NZ_JACEGD010000111.1 Primary Assembly 692 na scaffold_111 unplaced-scaffold na na JACEGD010000112.1 = NZ_JACEGD010000112.1 Primary Assembly 681 na scaffold_112 unplaced-scaffold na na JACEGD010000113.1 = NZ_JACEGD010000113.1 Primary Assembly 681 na scaffold_113 unplaced-scaffold na na JACEGD010000114.1 = NZ_JACEGD010000114.1 Primary Assembly 676 na scaffold_114 unplaced-scaffold na na JACEGD010000115.1 = NZ_JACEGD010000115.1 Primary Assembly 676 na scaffold_115 unplaced-scaffold na na JACEGD010000116.1 = NZ_JACEGD010000116.1 Primary Assembly 671 na scaffold_116 unplaced-scaffold na na JACEGD010000117.1 = NZ_JACEGD010000117.1 Primary Assembly 657 na scaffold_117 unplaced-scaffold na na JACEGD010000118.1 = NZ_JACEGD010000118.1 Primary Assembly 650 na scaffold_118 unplaced-scaffold na na JACEGD010000119.1 = NZ_JACEGD010000119.1 Primary Assembly 650 na scaffold_119 unplaced-scaffold na na JACEGD010000120.1 = NZ_JACEGD010000120.1 Primary Assembly 648 na scaffold_120 unplaced-scaffold na na JACEGD010000121.1 = NZ_JACEGD010000121.1 Primary Assembly 648 na scaffold_121 unplaced-scaffold na na JACEGD010000122.1 = NZ_JACEGD010000122.1 Primary Assembly 648 na scaffold_122 unplaced-scaffold na na JACEGD010000123.1 = NZ_JACEGD010000123.1 Primary Assembly 645 na scaffold_123 unplaced-scaffold na na JACEGD010000124.1 = NZ_JACEGD010000124.1 Primary Assembly 641 na scaffold_124 unplaced-scaffold na na JACEGD010000125.1 = NZ_JACEGD010000125.1 Primary Assembly 630 na scaffold_125 unplaced-scaffold na na JACEGD010000126.1 = NZ_JACEGD010000126.1 Primary Assembly 617 na scaffold_126 unplaced-scaffold na na JACEGD010000127.1 = NZ_JACEGD010000127.1 Primary Assembly 614 na scaffold_127 unplaced-scaffold na na JACEGD010000128.1 = NZ_JACEGD010000128.1 Primary Assembly 613 na scaffold_128 unplaced-scaffold na na JACEGD010000129.1 = NZ_JACEGD010000129.1 Primary Assembly 612 na scaffold_129 unplaced-scaffold na na JACEGD010000130.1 = NZ_JACEGD010000130.1 Primary Assembly 609 na scaffold_130 unplaced-scaffold na na JACEGD010000131.1 = NZ_JACEGD010000131.1 Primary Assembly 600 na scaffold_131 unplaced-scaffold na na JACEGD010000132.1 = NZ_JACEGD010000132.1 Primary Assembly 600 na scaffold_132 unplaced-scaffold na na JACEGD010000133.1 = NZ_JACEGD010000133.1 Primary Assembly 599 na