# Assembly name: ASM1646179v1 # Organism name: Rhodomicrobium udaipurense (a-proteobacteria) # Infraspecific name: strain=JA643 # Taxid: 1202716 # BioSample: SAMN17079315 # BioProject: PRJNA685190 # Submitter: Washington University in St. Louis # Date: 2021-01-03 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAEMUK01 # Assembly method: CLC Genomics Workbench v. 10.1.2 # Expected final version: no # Genome coverage: 500.0x # Sequencing technology: Illumina NovaSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_016461795.1 # RefSeq assembly accession: GCF_016461795.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_016461815.1 GCF_016461815.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name AB60_fwd_paired_contig_1 unplaced-scaffold na na JAEMUK010000001.1 = NZ_JAEMUK010000001.1 Primary Assembly 43271 na AB60_fwd_paired_contig_3 unplaced-scaffold na na JAEMUK010000002.1 = NZ_JAEMUK010000002.1 Primary Assembly 304473 na AB60_fwd_paired_contig_4 unplaced-scaffold na na JAEMUK010000003.1 = NZ_JAEMUK010000003.1 Primary Assembly 34893 na AB60_fwd_paired_contig_5 unplaced-scaffold na na JAEMUK010000004.1 = NZ_JAEMUK010000004.1 Primary Assembly 90230 na AB60_fwd_paired_contig_6 unplaced-scaffold na na JAEMUK010000005.1 = NZ_JAEMUK010000005.1 Primary Assembly 82315 na AB60_fwd_paired_contig_7 unplaced-scaffold na na JAEMUK010000006.1 = NZ_JAEMUK010000006.1 Primary Assembly 104881 na AB60_fwd_paired_contig_8 unplaced-scaffold na na JAEMUK010000007.1 = NZ_JAEMUK010000007.1 Primary Assembly 91850 na AB60_fwd_paired_contig_11 unplaced-scaffold na na JAEMUK010000008.1 = NZ_JAEMUK010000008.1 Primary Assembly 334776 na AB60_fwd_paired_contig_13 unplaced-scaffold na na JAEMUK010000009.1 = NZ_JAEMUK010000009.1 Primary Assembly 67289 na AB60_fwd_paired_contig_14 unplaced-scaffold na na JAEMUK010000010.1 = NZ_JAEMUK010000010.1 Primary Assembly 103855 na AB60_fwd_paired_contig_15 unplaced-scaffold na na JAEMUK010000011.1 = NZ_JAEMUK010000011.1 Primary Assembly 169414 na AB60_fwd_paired_contig_16 unplaced-scaffold na na JAEMUK010000012.1 = NZ_JAEMUK010000012.1 Primary Assembly 90225 na AB60_fwd_paired_contig_19 unplaced-scaffold na na JAEMUK010000013.1 = NZ_JAEMUK010000013.1 Primary Assembly 62128 na AB60_fwd_paired_contig_20 unplaced-scaffold na na JAEMUK010000014.1 = NZ_JAEMUK010000014.1 Primary Assembly 209366 na AB60_fwd_paired_contig_23 unplaced-scaffold na na JAEMUK010000015.1 = NZ_JAEMUK010000015.1 Primary Assembly 120828 na AB60_fwd_paired_contig_24 unplaced-scaffold na na JAEMUK010000016.1 = NZ_JAEMUK010000016.1 Primary Assembly 92482 na AB60_fwd_paired_contig_26 unplaced-scaffold na na JAEMUK010000017.1 = NZ_JAEMUK010000017.1 Primary Assembly 75310 na AB60_fwd_paired_contig_29 unplaced-scaffold na na JAEMUK010000018.1 = NZ_JAEMUK010000018.1 Primary Assembly 53315 na AB60_fwd_paired_contig_30 unplaced-scaffold na na JAEMUK010000019.1 = NZ_JAEMUK010000019.1 Primary Assembly 40490 na AB60_fwd_paired_contig_31 unplaced-scaffold na na JAEMUK010000020.1 = NZ_JAEMUK010000020.1 Primary Assembly 45966 na AB60_fwd_paired_contig_36 unplaced-scaffold na na JAEMUK010000021.1 = NZ_JAEMUK010000021.1 Primary Assembly 769 na AB60_fwd_paired_contig_40 unplaced-scaffold na na JAEMUK010000022.1 = NZ_JAEMUK010000022.1 Primary Assembly 27977 na AB60_fwd_paired_contig_41 unplaced-scaffold na na JAEMUK010000023.1 = NZ_JAEMUK010000023.1 Primary Assembly 23867 na AB60_fwd_paired_contig_42 unplaced-scaffold na na JAEMUK010000024.1 = NZ_JAEMUK010000024.1 Primary Assembly 24535 na AB60_fwd_paired_contig_43 unplaced-scaffold na na JAEMUK010000025.1 = NZ_JAEMUK010000025.1 Primary Assembly 8571 na AB60_fwd_paired_contig_46 unplaced-scaffold na na JAEMUK010000026.1 = NZ_JAEMUK010000026.1 Primary Assembly 33255 na AB60_fwd_paired_contig_47 unplaced-scaffold na na JAEMUK010000027.1 = NZ_JAEMUK010000027.1 Primary Assembly 1228 na AB60_fwd_paired_contig_49 unplaced-scaffold na na JAEMUK010000028.1 = NZ_JAEMUK010000028.1 Primary Assembly 3463 na AB60_fwd_paired_contig_50 unplaced-scaffold na na JAEMUK010000029.1 = NZ_JAEMUK010000029.1 Primary Assembly 33764 na AB60_fwd_paired_contig_51 unplaced-scaffold na na JAEMUK010000030.1 = NZ_JAEMUK010000030.1 Primary Assembly 1010 na AB60_fwd_paired_contig_52 unplaced-scaffold na na JAEMUK010000031.1 = NZ_JAEMUK010000031.1 Primary Assembly 677 na AB60_fwd_paired_contig_53 unplaced-scaffold na na JAEMUK010000032.1 = NZ_JAEMUK010000032.1 Primary Assembly 1820 na AB60_fwd_paired_contig_54 unplaced-scaffold na na JAEMUK010000033.1 = NZ_JAEMUK010000033.1 Primary Assembly 1553 na AB60_fwd_paired_contig_55 unplaced-scaffold na na JAEMUK010000034.1 = NZ_JAEMUK010000034.1 Primary Assembly 905 na AB60_fwd_paired_contig_56 unplaced-scaffold na na JAEMUK010000035.1 = NZ_JAEMUK010000035.1 Primary Assembly 8463 na AB60_fwd_paired_contig_57 unplaced-scaffold na na JAEMUK010000036.1 = NZ_JAEMUK010000036.1 Primary Assembly 538 na AB60_fwd_paired_contig_58 unplaced-scaffold na na JAEMUK010000037.1 = NZ_JAEMUK010000037.1 Primary Assembly 1107 na AB60_fwd_paired_contig_59 unplaced-scaffold na na JAEMUK010000038.1 = NZ_JAEMUK010000038.1 Primary Assembly 530 na AB60_fwd_paired_contig_60 unplaced-scaffold na na JAEMUK010000039.1 = NZ_JAEMUK010000039.1 Primary Assembly 1547 na AB60_fwd_paired_contig_62 unplaced-scaffold na na JAEMUK010000040.1 = NZ_JAEMUK010000040.1 Primary Assembly 8724 na AB60_fwd_paired_contig_63 unplaced-scaffold na na JAEMUK010000041.1 = NZ_JAEMUK010000041.1 Primary Assembly 9193 na AB60_fwd_paired_contig_64 unplaced-scaffold na na JAEMUK010000042.1 = NZ_JAEMUK010000042.1 Primary Assembly 3940 na AB60_fwd_paired_contig_66 unplaced-scaffold na na JAEMUK010000043.1 = NZ_JAEMUK010000043.1 Primary Assembly 1864 na AB60_fwd_paired_contig_67 unplaced-scaffold na na JAEMUK010000044.1 = NZ_JAEMUK010000044.1 Primary Assembly 2125 na AB60_fwd_paired_contig_68 unplaced-scaffold na na JAEMUK010000045.1 = NZ_JAEMUK010000045.1 Primary Assembly 15182 na AB60_fwd_paired_contig_70 unplaced-scaffold na na JAEMUK010000046.1 = NZ_JAEMUK010000046.1 Primary Assembly 420 na AB60_fwd_paired_contig_72 unplaced-scaffold na na JAEMUK010000047.1 = NZ_JAEMUK010000047.1 Primary Assembly 8625 na AB60_fwd_paired_contig_73 unplaced-scaffold na na JAEMUK010000048.1 = NZ_JAEMUK010000048.1 Primary Assembly 244 na AB60_fwd_paired_contig_74 unplaced-scaffold na na JAEMUK010000049.1 = NZ_JAEMUK010000049.1 Primary Assembly 224 na AB60_fwd_paired_contig_76 unplaced-scaffold na na JAEMUK010000050.1 = NZ_JAEMUK010000050.1 Primary Assembly 3781 na AB60_fwd_paired_contig_77 unplaced-scaffold na na JAEMUK010000051.1 = NZ_JAEMUK010000051.1 Primary Assembly 6285 na AB60_fwd_paired_contig_78 unplaced-scaffold na na JAEMUK010000052.1 = NZ_JAEMUK010000052.1 Primary Assembly 346 na AB60_fwd_paired_contig_79 unplaced-scaffold na na JAEMUK010000053.1 = NZ_JAEMUK010000053.1 Primary Assembly 263 na AB60_fwd_paired_contig_81 unplaced-scaffold na na JAEMUK010000054.1 = NZ_JAEMUK010000054.1 Primary Assembly 539 na AB60_fwd_paired_contig_82 unplaced-scaffold na na JAEMUK010000055.1 = NZ_JAEMUK010000055.1 Primary Assembly 212 na AB60_fwd_paired_contig_83 unplaced-scaffold na na JAEMUK010000056.1 = NZ_JAEMUK010000056.1 Primary Assembly 303 na AB60_fwd_paired_contig_84 unplaced-scaffold na na JAEMUK010000057.1 = NZ_JAEMUK010000057.1 Primary Assembly 298 na AB60_fwd_paired_contig_85 unplaced-scaffold na na JAEMUK010000058.1 = NZ_JAEMUK010000058.1 Primary Assembly 655 na AB60_fwd_paired_contig_86 unplaced-scaffold na na JAEMUK010000059.1 = NZ_JAEMUK010000059.1 Primary Assembly 285 na AB60_fwd_paired_contig_87 unplaced-scaffold na na JAEMUK010000060.1 = NZ_JAEMUK010000060.1 Primary Assembly 1188 na AB60_fwd_paired_contig_90 unplaced-scaffold na na JAEMUK010000061.1 = NZ_JAEMUK010000061.1 Primary Assembly 272 na AB60_fwd_paired_contig_92 unplaced-scaffold na na JAEMUK010000062.1 = NZ_JAEMUK010000062.1 Primary Assembly 258 na AB60_fwd_paired_contig_94 unplaced-scaffold na na JAEMUK010000063.1 = NZ_JAEMUK010000063.1 Primary Assembly 564 na AB60_fwd_paired_contig_95 unplaced-scaffold na na JAEMUK010000064.1 = NZ_JAEMUK010000064.1 Primary Assembly 278 na AB60_fwd_paired_contig_97 unplaced-scaffold na na JAEMUK010000065.1 = NZ_JAEMUK010000065.1 Primary Assembly 252 na AB60_fwd_paired_contig_98 unplaced-scaffold na na JAEMUK010000066.1 = NZ_JAEMUK010000066.1 Primary Assembly 356 na AB60_fwd_paired_contig_102 unplaced-scaffold na na JAEMUK010000067.1 = NZ_JAEMUK010000067.1 Primary Assembly 220 na AB60_fwd_paired_contig_103 unplaced-scaffold na na JAEMUK010000068.1 = NZ_JAEMUK010000068.1 Primary Assembly 212 na AB60_fwd_paired_contig_111 unplaced-scaffold na na JAEMUK010000069.1 = NZ_JAEMUK010000069.1 Primary Assembly 232 na AB60_fwd_paired_contig_112 unplaced-scaffold na na JAEMUK010000070.1 = NZ_JAEMUK010000070.1 Primary Assembly 270 na AB60_fwd_paired_contig_114 unplaced-scaffold na na JAEMUK010000071.1 = NZ_JAEMUK010000071.1 Primary Assembly 215 na AB60_fwd_paired_contig_117 unplaced-scaffold na na JAEMUK010000072.1 = NZ_JAEMUK010000072.1 Primary Assembly 237 na AB60_fwd_paired_contig_118 unplaced-scaffold na na JAEMUK010000073.1 = NZ_JAEMUK010000073.1 Primary Assembly 376 na AB60_fwd_paired_contig_120 unplaced-scaffold na na JAEMUK010000074.1 = NZ_JAEMUK010000074.1 Primary Assembly 216 na AB60_fwd_paired_contig_121 unplaced-scaffold na na JAEMUK010000075.1 = NZ_JAEMUK010000075.1 Primary Assembly 201 na AB60_fwd_paired_contig_122 unplaced-scaffold na na JAEMUK010000076.1 = NZ_JAEMUK010000076.1 Primary Assembly 262 na AB60_fwd_paired_contig_126 unplaced-scaffold na na JAEMUK010000077.1 = NZ_JAEMUK010000077.1 Primary Assembly 222 na Joined_contig_1 unplaced-scaffold na na JAEMUK010000078.1 = NZ_JAEMUK010000078.1 Primary Assembly 269192 na Joined_contig_2 unplaced-scaffold na na JAEMUK010000079.1 = NZ_JAEMUK010000079.1 Primary Assembly 257129 na Joined_contig_3 unplaced-scaffold na na JAEMUK010000080.1 = NZ_JAEMUK010000080.1 Primary Assembly 127072 na Joined_contig_4 unplaced-scaffold na na JAEMUK010000081.1 = NZ_JAEMUK010000081.1 Primary Assembly 113688 na Joined_contig_5 unplaced-scaffold na na JAEMUK010000082.1 = NZ_JAEMUK010000082.1 Primary Assembly 82860 na Joined_contig_6 unplaced-scaffold na na JAEMUK010000083.1 = NZ_JAEMUK010000083.1 Primary Assembly 112119 na Joined_contig_7 unplaced-scaffold na na JAEMUK010000084.1 = NZ_JAEMUK010000084.1 Primary Assembly 79791 na Joined_contig_8 unplaced-scaffold na na JAEMUK010000085.1 = NZ_JAEMUK010000085.1 Primary Assembly 42435 na Joined_contig_9 unplaced-scaffold na na JAEMUK010000086.1 = NZ_JAEMUK010000086.1 Primary Assembly 20320 na Joined_contig_10 unplaced-scaffold na na JAEMUK010000087.1 = NZ_JAEMUK010000087.1 Primary Assembly 13758 na Joined_contig_11 unplaced-scaffold na na JAEMUK010000088.1 = NZ_JAEMUK010000088.1 Primary Assembly 24236 na Joined_contig_12 unplaced-scaffold na na JAEMUK010000089.1 = NZ_JAEMUK010000089.1 Primary Assembly 11959 na Joined_contig_13 unplaced-scaffold na na JAEMUK010000090.1 = NZ_JAEMUK010000090.1 Primary Assembly 14477 na Joined_contig_14 unplaced-scaffold na na JAEMUK010000091.1 = NZ_JAEMUK010000091.1 Primary Assembly 9270 na Joined_contig_15 unplaced-scaffold na na JAEMUK010000092.1 = NZ_JAEMUK010000092.1 Primary Assembly 7090 na Joined_contig_16 unplaced-scaffold na na JAEMUK010000093.1 = NZ_JAEMUK010000093.1 Primary Assembly 3760 na Joined_contig_17 unplaced-scaffold na na JAEMUK010000094.1 = NZ_JAEMUK010000094.1 Primary Assembly 1489 na