# Assembly name: ASM1658408v1 # Organism name: Halochromatium glycolicum (g-proteobacteria) # Infraspecific name: strain=DSM 11080 # Taxid: 85075 # BioSample: SAMN07534996 # BioProject: PRJNA387386 # Submitter: GEOMAR Helmholtz Centre for Ocean Research Kiel # Date: 2021-01-08 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: NRSJ01 # Assembly method: SPAdes v. 3.10.1 # Expected final version: yes # Genome coverage: 75x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_016584085.1 # RefSeq assembly accession: GCF_016584085.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_016584095.1 GCF_016584095.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold0001 unplaced-scaffold na na NRSJ01000001.1 = NZ_NRSJ01000001.1 Primary Assembly 280360 na scaffold0002 unplaced-scaffold na na NRSJ01000002.1 = NZ_NRSJ01000002.1 Primary Assembly 221363 na scaffold0003 unplaced-scaffold na na NRSJ01000003.1 = NZ_NRSJ01000003.1 Primary Assembly 214969 na scaffold0004 unplaced-scaffold na na NRSJ01000004.1 = NZ_NRSJ01000004.1 Primary Assembly 197990 na scaffold0005 unplaced-scaffold na na NRSJ01000005.1 = NZ_NRSJ01000005.1 Primary Assembly 187877 na scaffold0006 unplaced-scaffold na na NRSJ01000006.1 = NZ_NRSJ01000006.1 Primary Assembly 183790 na scaffold0007 unplaced-scaffold na na NRSJ01000007.1 = NZ_NRSJ01000007.1 Primary Assembly 151127 na scaffold0008 unplaced-scaffold na na NRSJ01000008.1 = NZ_NRSJ01000008.1 Primary Assembly 133547 na scaffold0009 unplaced-scaffold na na NRSJ01000009.1 = NZ_NRSJ01000009.1 Primary Assembly 115885 na scaffold0010 unplaced-scaffold na na NRSJ01000010.1 = NZ_NRSJ01000010.1 Primary Assembly 114501 na scaffold0011 unplaced-scaffold na na NRSJ01000011.1 = NZ_NRSJ01000011.1 Primary Assembly 139554 na scaffold0012 unplaced-scaffold na na NRSJ01000012.1 = NZ_NRSJ01000012.1 Primary Assembly 111740 na scaffold0013 unplaced-scaffold na na NRSJ01000013.1 = NZ_NRSJ01000013.1 Primary Assembly 100724 na scaffold0014 unplaced-scaffold na na NRSJ01000014.1 = NZ_NRSJ01000014.1 Primary Assembly 93551 na scaffold0015 unplaced-scaffold na na NRSJ01000015.1 = NZ_NRSJ01000015.1 Primary Assembly 87090 na scaffold0016 unplaced-scaffold na na NRSJ01000016.1 = NZ_NRSJ01000016.1 Primary Assembly 84551 na scaffold0017 unplaced-scaffold na na NRSJ01000017.1 = NZ_NRSJ01000017.1 Primary Assembly 81871 na scaffold0018 unplaced-scaffold na na NRSJ01000018.1 = NZ_NRSJ01000018.1 Primary Assembly 119161 na scaffold0019 unplaced-scaffold na na NRSJ01000019.1 = NZ_NRSJ01000019.1 Primary Assembly 77327 na scaffold0020 unplaced-scaffold na na NRSJ01000020.1 = NZ_NRSJ01000020.1 Primary Assembly 75753 na scaffold0021 unplaced-scaffold na na NRSJ01000021.1 = NZ_NRSJ01000021.1 Primary Assembly 149241 na scaffold0022 unplaced-scaffold na na NRSJ01000022.1 = NZ_NRSJ01000022.1 Primary Assembly 72448 na scaffold0023 unplaced-scaffold na na NRSJ01000023.1 = NZ_NRSJ01000023.1 Primary Assembly 71382 na scaffold0024 unplaced-scaffold na na NRSJ01000024.1 = NZ_NRSJ01000024.1 Primary Assembly 69191 na scaffold0025 unplaced-scaffold na na NRSJ01000025.1 = NZ_NRSJ01000025.1 Primary Assembly 65494 na scaffold0026 unplaced-scaffold na na NRSJ01000026.1 = NZ_NRSJ01000026.1 Primary Assembly 64119 na scaffold0027 unplaced-scaffold na na NRSJ01000027.1 = NZ_NRSJ01000027.1 Primary Assembly 62529 na scaffold0028 unplaced-scaffold na na NRSJ01000028.1 = NZ_NRSJ01000028.1 Primary Assembly 69221 na scaffold0029 unplaced-scaffold na na NRSJ01000029.1 = NZ_NRSJ01000029.1 Primary Assembly 62471 na scaffold0030 unplaced-scaffold na na NRSJ01000030.1 = NZ_NRSJ01000030.1 Primary Assembly 58306 na scaffold0031 unplaced-scaffold na na NRSJ01000031.1 = NZ_NRSJ01000031.1 Primary Assembly 58013 na scaffold0032 unplaced-scaffold na na NRSJ01000032.1 = NZ_NRSJ01000032.1 Primary Assembly 57732 na scaffold0033 unplaced-scaffold na na NRSJ01000033.1 = NZ_NRSJ01000033.1 Primary Assembly 55784 na scaffold0034 unplaced-scaffold na na NRSJ01000034.1 = NZ_NRSJ01000034.1 Primary Assembly 55455 na scaffold0035 unplaced-scaffold na na NRSJ01000035.1 = NZ_NRSJ01000035.1 Primary Assembly 52920 na scaffold0036 unplaced-scaffold na na NRSJ01000036.1 = NZ_NRSJ01000036.1 Primary Assembly 51634 na scaffold0037 unplaced-scaffold na na NRSJ01000037.1 = NZ_NRSJ01000037.1 Primary Assembly 53007 na scaffold0038 unplaced-scaffold na na NRSJ01000038.1 = NZ_NRSJ01000038.1 Primary Assembly 50215 na scaffold0039 unplaced-scaffold na na NRSJ01000039.1 = NZ_NRSJ01000039.1 Primary Assembly 48133 na scaffold0040 unplaced-scaffold na na NRSJ01000040.1 = NZ_NRSJ01000040.1 Primary Assembly 47972 na scaffold0041 unplaced-scaffold na na NRSJ01000041.1 = NZ_NRSJ01000041.1 Primary Assembly 72585 na scaffold0042 unplaced-scaffold na na NRSJ01000042.1 = NZ_NRSJ01000042.1 Primary Assembly 45956 na scaffold0043 unplaced-scaffold na na NRSJ01000043.1 = NZ_NRSJ01000043.1 Primary Assembly 45491 na scaffold0044 unplaced-scaffold na na NRSJ01000044.1 = NZ_NRSJ01000044.1 Primary Assembly 46056 na scaffold0045 unplaced-scaffold na na NRSJ01000045.1 = NZ_NRSJ01000045.1 Primary Assembly 62462 na scaffold0046 unplaced-scaffold na na NRSJ01000046.1 = NZ_NRSJ01000046.1 Primary Assembly 44272 na scaffold0047 unplaced-scaffold na na NRSJ01000047.1 = NZ_NRSJ01000047.1 Primary Assembly 40170 na scaffold0048 unplaced-scaffold na na NRSJ01000048.1 = NZ_NRSJ01000048.1 Primary Assembly 39027 na scaffold0049 unplaced-scaffold na na NRSJ01000049.1 = NZ_NRSJ01000049.1 Primary Assembly 37973 na scaffold0050 unplaced-scaffold na na NRSJ01000050.1 = NZ_NRSJ01000050.1 Primary Assembly 33315 na scaffold0051 unplaced-scaffold na na NRSJ01000051.1 = NZ_NRSJ01000051.1 Primary Assembly 33099 na scaffold0052 unplaced-scaffold na na NRSJ01000052.1 = NZ_NRSJ01000052.1 Primary Assembly 32907 na scaffold0053 unplaced-scaffold na na NRSJ01000053.1 = NZ_NRSJ01000053.1 Primary Assembly 32937 na scaffold0054 unplaced-scaffold na na NRSJ01000054.1 = NZ_NRSJ01000054.1 Primary Assembly 37191 na scaffold0055 unplaced-scaffold na na NRSJ01000055.1 = NZ_NRSJ01000055.1 Primary Assembly 26860 na scaffold0056 unplaced-scaffold na na NRSJ01000056.1 = NZ_NRSJ01000056.1 Primary Assembly 26119 na scaffold0057 unplaced-scaffold na na NRSJ01000057.1 = NZ_NRSJ01000057.1 Primary Assembly 25766 na scaffold0058 unplaced-scaffold na na NRSJ01000058.1 = NZ_NRSJ01000058.1 Primary Assembly 25445 na scaffold0059 unplaced-scaffold na na NRSJ01000059.1 = NZ_NRSJ01000059.1 Primary Assembly 38905 na scaffold0060 unplaced-scaffold na na NRSJ01000060.1 = NZ_NRSJ01000060.1 Primary Assembly 26682 na scaffold0061 unplaced-scaffold na na NRSJ01000061.1 = NZ_NRSJ01000061.1 Primary Assembly 23184 na scaffold0062 unplaced-scaffold na na NRSJ01000062.1 = NZ_NRSJ01000062.1 Primary Assembly 22589 na scaffold0063 unplaced-scaffold na na NRSJ01000063.1 = NZ_NRSJ01000063.1 Primary Assembly 20884 na scaffold0064 unplaced-scaffold na na NRSJ01000064.1 = NZ_NRSJ01000064.1 Primary Assembly 19745 na scaffold0065 unplaced-scaffold na na NRSJ01000065.1 = NZ_NRSJ01000065.1 Primary Assembly 19400 na scaffold0066 unplaced-scaffold na na NRSJ01000066.1 = NZ_NRSJ01000066.1 Primary Assembly 18277 na scaffold0067 unplaced-scaffold na na NRSJ01000067.1 = NZ_NRSJ01000067.1 Primary Assembly 18444 na scaffold0068 unplaced-scaffold na na NRSJ01000068.1 = NZ_NRSJ01000068.1 Primary Assembly 15998 na scaffold0069 unplaced-scaffold na na NRSJ01000069.1 = NZ_NRSJ01000069.1 Primary Assembly 15385 na scaffold0070 unplaced-scaffold na na NRSJ01000070.1 = NZ_NRSJ01000070.1 Primary Assembly 14731 na scaffold0071 unplaced-scaffold na na NRSJ01000071.1 = NZ_NRSJ01000071.1 Primary Assembly 16682 na scaffold0072 unplaced-scaffold na na NRSJ01000072.1 = NZ_NRSJ01000072.1 Primary Assembly 12498 na scaffold0073 unplaced-scaffold na na NRSJ01000073.1 = NZ_NRSJ01000073.1 Primary Assembly 12455 na scaffold0074 unplaced-scaffold na na NRSJ01000074.1 = NZ_NRSJ01000074.1 Primary Assembly 12212 na scaffold0075 unplaced-scaffold na na NRSJ01000075.1 = NZ_NRSJ01000075.1 Primary Assembly 21090 na scaffold0076 unplaced-scaffold na na NRSJ01000076.1 = NZ_NRSJ01000076.1 Primary Assembly 10413 na scaffold0077 unplaced-scaffold na na NRSJ01000077.1 = NZ_NRSJ01000077.1 Primary Assembly 9937 na scaffold0078 unplaced-scaffold na na NRSJ01000078.1 = NZ_NRSJ01000078.1 Primary Assembly 9084 na scaffold0079 unplaced-scaffold na na NRSJ01000079.1 = NZ_NRSJ01000079.1 Primary Assembly 8450 na scaffold0080 unplaced-scaffold na na NRSJ01000080.1 = NZ_NRSJ01000080.1 Primary Assembly 8232 na scaffold0081 unplaced-scaffold na na NRSJ01000081.1 = NZ_NRSJ01000081.1 Primary Assembly 7569 na scaffold0082 unplaced-scaffold na na NRSJ01000082.1 = NZ_NRSJ01000082.1 Primary Assembly 7278 na scaffold0083 unplaced-scaffold na na NRSJ01000083.1 = NZ_NRSJ01000083.1 Primary Assembly 6445 na scaffold0084 unplaced-scaffold na na NRSJ01000084.1 = NZ_NRSJ01000084.1 Primary Assembly 6180 na scaffold0085 unplaced-scaffold na na NRSJ01000085.1 = NZ_NRSJ01000085.1 Primary Assembly 5546 na scaffold0086 unplaced-scaffold na na NRSJ01000086.1 = NZ_NRSJ01000086.1 Primary Assembly 5376 na scaffold0087 unplaced-scaffold na na NRSJ01000087.1 = NZ_NRSJ01000087.1 Primary Assembly 4914 na scaffold0088 unplaced-scaffold na na NRSJ01000088.1 = NZ_NRSJ01000088.1 Primary Assembly 4554 na scaffold0089 unplaced-scaffold na na NRSJ01000089.1 = NZ_NRSJ01000089.1 Primary Assembly 4440 na scaffold0090 unplaced-scaffold na na NRSJ01000090.1 = NZ_NRSJ01000090.1 Primary Assembly 4015 na scaffold0091 unplaced-scaffold na na NRSJ01000091.1 = NZ_NRSJ01000091.1 Primary Assembly 3330 na scaffold0092 unplaced-scaffold na na NRSJ01000092.1 = NZ_NRSJ01000092.1 Primary Assembly 3290 na scaffold0093 unplaced-scaffold na na NRSJ01000093.1 = NZ_NRSJ01000093.1 Primary Assembly 3839 na scaffold0094 unplaced-scaffold na na NRSJ01000094.1 = NZ_NRSJ01000094.1 Primary Assembly 3216 na scaffold0095 unplaced-scaffold na na NRSJ01000095.1 = NZ_NRSJ01000095.1 Primary Assembly 2928 na scaffold0096 unplaced-scaffold na na NRSJ01000096.1 = NZ_NRSJ01000096.1 Primary Assembly 2839 na scaffold0097 unplaced-scaffold na na NRSJ01000097.1 = NZ_NRSJ01000097.1 Primary Assembly 2699 na scaffold0098 unplaced-scaffold na na NRSJ01000098.1 = NZ_NRSJ01000098.1 Primary Assembly 2663 na scaffold0099 unplaced-scaffold na na NRSJ01000099.1 = NZ_NRSJ01000099.1 Primary Assembly 2606 na scaffold0100 unplaced-scaffold na na NRSJ01000100.1 = NZ_NRSJ01000100.1 Primary Assembly 2293 na scaffold0101 unplaced-scaffold na na NRSJ01000101.1 = NZ_NRSJ01000101.1 Primary Assembly 2108 na scaffold0102 unplaced-scaffold na na NRSJ01000102.1 = NZ_NRSJ01000102.1 Primary Assembly 2092 na scaffold0103 unplaced-scaffold na na NRSJ01000103.1 = NZ_NRSJ01000103.1 Primary Assembly 1988 na scaffold0104 unplaced-scaffold na na NRSJ01000104.1 = NZ_NRSJ01000104.1 Primary Assembly 1969 na scaffold0105 unplaced-scaffold na na NRSJ01000105.1 = NZ_NRSJ01000105.1 Primary Assembly 1935 na scaffold0106 unplaced-scaffold na na NRSJ01000106.1 = NZ_NRSJ01000106.1 Primary Assembly 1854 na scaffold0107 unplaced-scaffold na na NRSJ01000107.1 = NZ_NRSJ01000107.1 Primary Assembly 1700 na scaffold0108 unplaced-scaffold na na NRSJ01000108.1 = NZ_NRSJ01000108.1 Primary Assembly 1454 na scaffold0109 unplaced-scaffold na na NRSJ01000109.1 = NZ_NRSJ01000109.1 Primary Assembly 1328 na scaffold0110 unplaced-scaffold na na NRSJ01000110.1 = NZ_NRSJ01000110.1 Primary Assembly 1319 na scaffold0111 unplaced-scaffold na na NRSJ01000111.1 = NZ_NRSJ01000111.1 Primary Assembly 1994 na scaffold0112 unplaced-scaffold na na NRSJ01000112.1 = NZ_NRSJ01000112.1 Primary Assembly 1219 na scaffold0113 unplaced-scaffold na na NRSJ01000113.1 = NZ_NRSJ01000113.1 Primary Assembly 1208 na scaffold0114 unplaced-scaffold na na NRSJ01000114.1 = NZ_NRSJ01000114.1 Primary Assembly 1162 na scaffold0115 unplaced-scaffold na na NRSJ01000115.1 = NZ_NRSJ01000115.1 Primary Assembly 2125 na scaffold0116 unplaced-scaffold na na NRSJ01000116.1 = NZ_NRSJ01000116.1 Primary Assembly 1085 na scaffold0117 unplaced-scaffold na na NRSJ01000117.1 = NZ_NRSJ01000117.1 Primary Assembly 1047 na scaffold0118 unplaced-scaffold na na NRSJ01000118.1 = NZ_NRSJ01000118.1 Primary Assembly 1017 na scaffold0119 unplaced-scaffold na na NRSJ01000119.1 = NZ_NRSJ01000119.1 Primary Assembly 975 na scaffold0120 unplaced-scaffold na na NRSJ01000120.1 = NZ_NRSJ01000120.1 Primary Assembly 962 na scaffold0121 unplaced-scaffold na na NRSJ01000121.1 = NZ_NRSJ01000121.1 Primary Assembly 1546 na scaffold0122 unplaced-scaffold na na NRSJ01000122.1 = NZ_NRSJ01000122.1 Primary Assembly 891 na scaffold0123 unplaced-scaffold na na NRSJ01000123.1 = NZ_NRSJ01000123.1 Primary Assembly 868 na scaffold0124 unplaced-scaffold na na NRSJ01000124.1 = NZ_NRSJ01000124.1 Primary Assembly 812 na scaffold0125 unplaced-scaffold na na NRSJ01000125.1 = NZ_NRSJ01000125.1 Primary Assembly 1257 na scaffold0126 unplaced-scaffold na na NRSJ01000126.1 = NZ_NRSJ01000126.1 Primary Assembly 747 na scaffold0127 unplaced-scaffold na na NRSJ01000127.1 = NZ_NRSJ01000127.1 Primary Assembly 745 na scaffold0128 unplaced-scaffold na na NRSJ01000128.1 = NZ_NRSJ01000128.1 Primary Assembly 745 na scaffold0129 unplaced-scaffold na na NRSJ01000129.1 = NZ_NRSJ01000129.1 Primary Assembly 716 na scaffold0130 unplaced-scaffold na na NRSJ01000130.1 = NZ_NRSJ01000130.1 Primary Assembly 716 na scaffold0131 unplaced-scaffold na na NRSJ01000131.1 = NZ_NRSJ01000131.1 Primary Assembly 713 na scaffold0132 unplaced-scaffold na na NRSJ01000132.1 = NZ_NRSJ01000132.1 Primary Assembly 675 na scaffold0133 unplaced-scaffold na na NRSJ01000133.1 = NZ_NRSJ01000133.1 Primary Assembly 659 na scaffold0134 unplaced-scaffold na na NRSJ01000134.1 = NZ_NRSJ01000134.1 Primary Assembly 651 na scaffold0135 unplaced-scaffold na na NRSJ01000135.1 = NZ_NRSJ01000135.1 Primary Assembly 642 na scaffold0136 unplaced-scaffold na na NRSJ01000136.1 = NZ_NRSJ01000136.1 Primary Assembly 588 na scaffold0137 unplaced-scaffold na na NRSJ01000137.1 = NZ_NRSJ01000137.1 Primary Assembly 598 na scaffold0139 unplaced-scaffold na na NRSJ01000138.1 = NZ_NRSJ01000138.1 Primary Assembly 582 na scaffold0140 unplaced-scaffold na na NRSJ01000139.1 = NZ_NRSJ01000139.1 Primary Assembly 579 na scaffold0141 unplaced-scaffold na na NRSJ01000140.1 = NZ_NRSJ01000140.1 Primary Assembly 523 na scaffold0142 unplaced-scaffold na na NRSJ01000141.1 = NZ_NRSJ01000141.1 Primary Assembly 510 na scaffold0143 unplaced-scaffold na na NRSJ01000142.1 = NZ_NRSJ01000142.1 Primary Assembly 492 na scaffold0144 unplaced-scaffold na na NRSJ01000143.1 = NZ_NRSJ01000143.1 Primary Assembly 540 na scaffold0145 unplaced-scaffold na na NRSJ01000144.1 = NZ_NRSJ01000144.1 Primary Assembly 522 na scaffold0146 unplaced-scaffold na na NRSJ01000145.1 = NZ_NRSJ01000145.1 Primary Assembly 515 na scaffold0147 unplaced-scaffold na na NRSJ01000146.1 = NZ_NRSJ01000146.1 Primary Assembly 483 na scaffold0148 unplaced-scaffold na na NRSJ01000147.1 = NZ_NRSJ01000147.1 Primary Assembly 480 na