hub GCF_016772045.1 genome assembly shortLabel Rambouillet sheep (U.Idaho 2021) longLabel Rambouillet sheep (U.Idaho 2021)/Ovis aries/GCF_016772045.1_ARS-UI_Ramb_v2.0 genome assembly useOneFile on email hclawson@ucsc.edu descriptionUrl html/GCF_016772045.1_ARS-UI_Ramb_v2.0.description.html genome GCF_016772045.1 taxId 9940 groups groups.txt description Rambouillet sheep (U.Idaho 2021) twoBitPath GCF_016772045.1.2bit twoBitBptUrl GCF_016772045.1.2bit.bpt chromSizes GCF_016772045.1.chrom.sizes.txt chromAliasBb GCF_016772045.1.chromAlias.bb chromAuthority ucsc organism ARS-UI_Ramb_v2.0 Feb. 2021 defaultPos NC_056054.1:92872400-92882400 scientificName Ovis aries htmlPath html/GCF_016772045.1_ARS-UI_Ramb_v2.0.description.html blat dynablat-01.soe.ucsc.edu 4040 dynamic GCF/016/772/045/GCF_016772045.1 transBlat dynablat-01.soe.ucsc.edu 4040 dynamic GCF/016/772/045/GCF_016772045.1 isPcr dynablat-01.soe.ucsc.edu 4040 dynamic GCF/016/772/045/GCF_016772045.1 liftOver.GCF_002742125.1 liftOver/GCF_016772045.1ToGCF_002742125.1.over.chain.gz liftOver.GCF_016772045.2 liftOver/GCF_016772045.1ToGCF_016772045.2.over.chain.gz liftOver.oviAri3 liftOver/GCF_016772045.1ToOviAri3.over.chain.gz liftOver.oviAri4 liftOver/GCF_016772045.1ToOviAri4.over.chain.gz track assembly longLabel Assembly shortLabel Assembly visibility pack colorByStrand 150,100,30 230,170,40 color 150,100,30 altColor 230,170,40 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.assembly.bb type bigBed 6 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.assembly searchIndex name searchTrix ixIxx/GCF_016772045.1_ARS-UI_Ramb_v2.0.assembly.ix url https://www.ncbi.nlm.nih.gov/nuccore/$$ urlLabel NCBI Nucleotide database: group map track cytoBandIdeo shortLabel Chromosome Band (Ideogram) longLabel Ideogram for Orientation group map visibility dense type bigBed 4 + bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.cytoBand.bb track gc5Base shortLabel GC Percent longLabel GC Percent in 5-Base Windows group map visibility full autoScale Off maxHeightPixels 128:36:16 graphTypeDefault Bar gridDefault OFF windowingFunction Mean color 0,0,0 altColor 128,128,128 viewLimits 30:70 type bigWig 0 100 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.gc5Base.bw html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.gc5Base track tanDups shortLabel Tandem Dups longLabel Paired identical sequences compositeTrack on visibility hide type bigBed 12 group map html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.tanDups track tandemDups parent tanDups on shortLabel Tandem Dups longLabel Paired exactly identical sequence survey over entire genome assembly bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.tandemDups.bb type bigBed 12 track repeatMasker shortLabel RepeatMasker longLabel RepeatMasker Repetitive Elements type bigRmsk 9 + visibility pack group varRep bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.rmsk.bb xrefDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.rmsk.align.bb maxWindowToDraw 5000000 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.repeatMasker track simpleRepeat shortLabel Simple Repeats longLabel Simple Tandem Repeats by TRF group varRep visibility dense type bigBed 4 + bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.simpleRepeat.bb html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.simpleRepeat track refSeqComposite compositeTrack on shortLabel NCBI RefSeq longLabel RefSeq gene predictions from NCBI group genes visibility pack type bigBed dragAndDrop subTracks allButtonPair on dataVersion NCBI Ovis aries Annotation Release 104 (2021-07-03) html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.refSeqComposite priority 2 track ncbiRefSeq parent refSeqComposite on color 12,12,120 shortLabel RefSeq All type bigGenePred urls geneName="https://www.ncbi.nlm.nih.gov/nuccore/$$?report=genbank" geneName2="https://www.ncbi.nlm.nih.gov/datasets/gene/$D/?search=$$" labelFields name,geneName,geneName2 defaultLabelFields geneName2 searchIndex name searchTrix ixIxx/GCF_016772045.1_ARS-UI_Ramb_v2.0.ncbiRefSeq.ix bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.ncbiRefSeq.bb longLabel NCBI RefSeq genes, curated and predicted sets (NM_*, XM_*, NR_*, XR_*, NP_* or YP_*) idXref ncbiRefSeqLink mrnaAcc name baseColorUseCds given baseColorDefault genomicCodons priority 1 track ncbiRefSeqCurated color 12,12,120 parent refSeqComposite on shortLabel RefSeq Curated longLabel NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*) type bigGenePred urls geneName="https://www.ncbi.nlm.nih.gov/nuccore/$$?report=genbank" geneName2="https://www.ncbi.nlm.nih.gov/datasets/gene/$D/?search=$$" labelFields name,geneName,geneName2 defaultLabelFields geneName2 searchIndex name searchTrix ixIxx/GCF_016772045.1_ARS-UI_Ramb_v2.0.ncbiRefSeqCurated.ix idXref ncbiRefSeqLink mrnaAcc name bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.ncbiRefSeqCurated.bb baseColorUseCds given baseColorDefault genomicCodons priority 2 track ncbiRefSeqPredicted color 12,12,120 parent refSeqComposite on shortLabel RefSeq Predicted longLabel NCBI RefSeq genes, predicted subset (XM_* or XR_*) type bigGenePred urls geneName="https://www.ncbi.nlm.nih.gov/nuccore/$$?report=genbank" geneName2="https://www.ncbi.nlm.nih.gov/datasets/gene/$D/?search=$$" labelFields name,geneName,geneName2 defaultLabelFields geneName2 searchIndex name searchTrix ixIxx/GCF_016772045.1_ARS-UI_Ramb_v2.0.ncbiRefSeqPredicted.ix idXref ncbiRefSeqLink mrnaAcc name bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.ncbiRefSeqPredicted.bb baseColorUseCds given baseColorDefault genomicCodons priority 3 track ncbiRefSeqOther color 32,32,32 parent refSeqComposite on shortLabel RefSeq Other longLabel NCBI RefSeq other annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*) priority 4 searchIndex name searchTrix ixIxx/GCF_016772045.1_ARS-UI_Ramb_v2.0.ncbiRefSeqOther.ix bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.ncbiRefSeqOther.bb type bigBed 12 + labelFields name skipEmptyFields on urls GeneID="https://www.ncbi.nlm.nih.gov/gene/$$" MIM="https://www.ncbi.nlm.nih.gov/omim/$$" HGNC="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" FlyBase="http://flybase.org/reports/$$" WormBase="http://www.wormbase.org/db/gene/gene?name=$$" RGD="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" SGD="https://www.yeastgenome.org/locus/$$" miRBase="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=$$" ZFIN="https://zfin.org/$$" MGI="http://www.informatics.jax.org/marker/$$" track ncbiRefSeqPsl priority 5 parent refSeqComposite off shortLabel RefSeq Alignments longLabel RefSeq Alignments of RNAs type bigPsl searchIndex name bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.bigPsl.bb indelDoubleInsert on indelQueryInsert on showDiffBasesAllScales . showDiffBasesMaxZoom 10000.0 showCdsMaxZoom 10000.0 showCdsAllScales . baseColorDefault diffCodons pslSequence no baseColorUseSequence lfExtra baseColorUseCds table given color 0,0,0 track cpgIslands compositeTrack on shortLabel CpG Islands longLabel CpG Islands (Islands < 300 Bases are Light Green) group regulation visibility pack type bigBed 4 + html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.cpgIslands track cpgIslandExt parent cpgIslands off shortLabel CpG Islands longLabel CpG Islands (Islands < 300 Bases are Light Green) type bigBed 4 + priority 1 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.cpgIslandExt.bb track cpgIslandExtUnmasked parent cpgIslands on shortLabel Unmasked CpG longLabel CpG Islands on All Sequence (Islands < 300 Bases are Light Green) type bigBed 4 + priority 2 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.cpgIslandExtUnmasked.bb track windowMasker shortLabel WM + SDust longLabel Genomic Intervals Masked by WindowMasker + SDust group varRep visibility dense type bigBed 3 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.windowMasker.bb html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.windowMasker track allGaps shortLabel All Gaps longLabel All gaps of unknown nucleotides (N's), including AGP annotated gaps group map visibility dense type bigBed 3 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.allGaps.bb html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.allGaps track augustus shortLabel Augustus longLabel Augustus Gene Predictions group genes visibility dense color 180,0,0 type bigGenePred bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.augustus.bb html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.augustus track xenoRefGene shortLabel RefSeq mRNAs longLabel RefSeq mRNAs mapped to this assembly group rna visibility pack color 180,0,0 type bigGenePred bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.xenoRefGene.bb url https://www.ncbi.nlm.nih.gov/nuccore/$$ urlLabel NCBI Nucleotide database: labelFields name,geneName,geneName2 defaultLabelFields geneName searchIndex name searchTrix ixIxx/GCF_016772045.1_ARS-UI_Ramb_v2.0.xenoRefGene.ix html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.xenoRefGene track GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNet compositeTrack on shortLabel Chain/Net longLabel Chain alignments to target sequence: GCF_016772045.1_ARS-UI_Ramb_v2.0 subGroup1 view Views chain=Chains synten=Syntenic rbest=Reciprocal_best liftover=Lift_over align=Alignment subGroup2 species Assembly s000=GCF_016772045.2 s001=GCF_002742125.1 s002=oviAri4 s003=oviAri3 subGroup3 chainType chain_type c00=chain c01=syntenic c02=reciprocal_best c03=lift_over c04=chain_align c05=syntenic_align c06=reciprocal_align c07=lift_over_align dragAndDrop subTracks visibility hide group compGeno color 0,0,0 altColor 255,255,0 type bed 3 chainLinearGap loose chainMinScore 5000 dimensions dimensionX=chainType dimensionY=species sortOrder species=+ view=+ chainType=+ configurable on html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet track GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewchain shortLabel Chains view chain visibility dense parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNet spectrum on track GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewSynTen shortLabel Syntenic view synten visibility hide parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNet spectrum on track GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewRBest shortLabel Reciprocal best view rbest visibility hide parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNet spectrum on track GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewLiftOver shortLabel Lift over view liftover visibility hide parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNet spectrum on track chainGCF_016772045.2 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewchain on subGroups view=chain species=s000 chainType=c00 shortLabel sheep Chain longLabel sheep/GCF_016772045.2_ARS-UI_Ramb_v3.0 (2023-07-20) Chained Alignments type bigChain GCF_016772045.2 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainGCF_016772045.2.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainGCF_016772045.2Link.bb otherDb GCF_016772045.2 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.016 track chainSynGCF_016772045.2 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewSynTen off subGroups view=synten species=s000 chainType=c01 shortLabel sheep synChain longLabel sheep/GCF_016772045.2_ARS-UI_Ramb_v3.0 (2023-07-20) Chained Alignments type bigChain GCF_016772045.2 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainSynGCF_016772045.2.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainSynGCF_016772045.2Link.bb otherDb GCF_016772045.2 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.016 track chainRBestGCF_016772045.2 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewRBest off subGroups view=rbest species=s000 chainType=c02 shortLabel sheep rbChain longLabel sheep/GCF_016772045.2_ARS-UI_Ramb_v3.0 (2023-07-20) Chained Alignments type bigChain GCF_016772045.2 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainRBestGCF_016772045.2.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainRBestGCF_016772045.2Link.bb otherDb GCF_016772045.2 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.016 track chainLiftOverGCF_016772045.2 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewLiftOver off subGroups view=liftover species=s000 chainType=c03 shortLabel sheep loChain longLabel sheep/GCF_016772045.2_ARS-UI_Ramb_v3.0 (2023-07-20) Chained Alignments type bigChain GCF_016772045.2 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainLiftOverGCF_016772045.2.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainLiftOverGCF_016772045.2Link.bb otherDb GCF_016772045.2 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.016 track chainGCF_002742125.1 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewchain off subGroups view=chain species=s001 chainType=c00 shortLabel Rambouillet sheep Chain longLabel Rambouillet sheep/GCF_002742125.1_Oar_rambouillet_v1.0 (2017-11-02) Chained Alignments type bigChain GCF_002742125.1 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainGCF_002742125.1.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainGCF_002742125.1Link.bb otherDb GCF_002742125.1 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.214 track chainSynGCF_002742125.1 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewSynTen off subGroups view=synten species=s001 chainType=c01 shortLabel Rambouillet sheep synChain longLabel Rambouillet sheep/GCF_002742125.1_Oar_rambouillet_v1.0 (2017-11-02) Chained Alignments type bigChain GCF_002742125.1 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainSynGCF_002742125.1.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainSynGCF_002742125.1Link.bb otherDb GCF_002742125.1 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.214 track chainRBestGCF_002742125.1 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewRBest off subGroups view=rbest species=s001 chainType=c02 shortLabel Rambouillet sheep rbChain longLabel Rambouillet sheep/GCF_002742125.1_Oar_rambouillet_v1.0 (2017-11-02) Chained Alignments type bigChain GCF_002742125.1 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainRBestGCF_002742125.1.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainRBestGCF_002742125.1Link.bb otherDb GCF_002742125.1 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.214 track chainLiftOverGCF_002742125.1 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewLiftOver off subGroups view=liftover species=s001 chainType=c03 shortLabel Rambouillet sheep loChain longLabel Rambouillet sheep/GCF_002742125.1_Oar_rambouillet_v1.0 (2017-11-02) Chained Alignments type bigChain GCF_002742125.1 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainLiftOverGCF_002742125.1.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainLiftOverGCF_002742125.1Link.bb otherDb GCF_002742125.1 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.214 track chainOviAri4 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewchain off subGroups view=chain species=s002 chainType=c00 shortLabel Sheep/oviAri4 Chain longLabel Sheep/oviAri4/oviAri4 (Nov. 2015) Chained Alignments type bigChain oviAri4 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainOviAri4.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainOviAri4Link.bb otherDb oviAri4 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 2.868 track chainSynOviAri4 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewSynTen off subGroups view=synten species=s002 chainType=c01 shortLabel Sheep/oviAri4 synChain longLabel Sheep/oviAri4/oviAri4 (Nov. 2015) Chained Alignments type bigChain oviAri4 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainSynOviAri4.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainSynOviAri4Link.bb otherDb oviAri4 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 2.868 track chainRBestOviAri4 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewRBest off subGroups view=rbest species=s002 chainType=c02 shortLabel Sheep/oviAri4 rbChain longLabel Sheep/oviAri4/oviAri4 (Nov. 2015) Chained Alignments type bigChain oviAri4 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainRBestOviAri4.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainRBestOviAri4Link.bb otherDb oviAri4 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 2.868 track chainLiftOverOviAri4 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewLiftOver off subGroups view=liftover species=s002 chainType=c03 shortLabel Sheep/oviAri4 loChain longLabel Sheep/oviAri4/oviAri4 (Nov. 2015) Chained Alignments type bigChain oviAri4 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainLiftOverOviAri4.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainLiftOverOviAri4Link.bb otherDb oviAri4 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 2.868 track chainOviAri3 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewchain off subGroups view=chain species=s003 chainType=c00 shortLabel Sheep/oviAri3 Chain longLabel Sheep/oviAri3/oviAri3 (Aug. 2012) Chained Alignments type bigChain oviAri3 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainOviAri3.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainOviAri3Link.bb otherDb oviAri3 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 4.434 track chainSynOviAri3 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewSynTen off subGroups view=synten species=s003 chainType=c01 shortLabel Sheep/oviAri3 synChain longLabel Sheep/oviAri3/oviAri3 (Aug. 2012) Chained Alignments type bigChain oviAri3 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainSynOviAri3.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainSynOviAri3Link.bb otherDb oviAri3 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 4.434 track chainRBestOviAri3 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewRBest off subGroups view=rbest species=s003 chainType=c02 shortLabel Sheep/oviAri3 rbChain longLabel Sheep/oviAri3/oviAri3 (Aug. 2012) Chained Alignments type bigChain oviAri3 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainRBestOviAri3.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainRBestOviAri3Link.bb otherDb oviAri3 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 4.434 track chainLiftOverOviAri3 parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNetViewLiftOver off subGroups view=liftover species=s003 chainType=c03 shortLabel Sheep/oviAri3 loChain longLabel Sheep/oviAri3/oviAri3 (Aug. 2012) Chained Alignments type bigChain oviAri3 bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainLiftOverOviAri3.bb linkDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainLiftOverOviAri3Link.bb otherDb oviAri3 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 4.434 track GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet shortLabel Nets view align visibility hide parent GCF_016772045.1_ARS-UI_Ramb_v2.0ChainNet track netGCF_016772045.2 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s000 chainType=c04 shortLabel sheep mafNet longLabel sheep/GCF_016772045.2_ARS-UI_Ramb_v3.0 (2023-07-20) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_016772045.2.net.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_016772045.2.net.summary.bb speciesOrder GCF_016772045.2 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.016 track synNetGCF_016772045.2 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s000 chainType=c05 shortLabel sheep synNet longLabel sheep/GCF_016772045.2_ARS-UI_Ramb_v3.0 (2023-07-20) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_016772045.2.synNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_016772045.2.synNet.summary.bb speciesOrder GCF_016772045.2 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.016 track rbestNetGCF_016772045.2 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s000 chainType=c06 shortLabel sheep rbestNet longLabel sheep/GCF_016772045.2_ARS-UI_Ramb_v3.0 (2023-07-20) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_016772045.2.rbestNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_016772045.2.rbestNet.summary.bb speciesOrder GCF_016772045.2 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.016 track netGCF_002742125.1 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s001 chainType=c04 shortLabel Rambouillet sheep mafNet longLabel Rambouillet sheep/GCF_002742125.1_Oar_rambouillet_v1.0 (2017-11-02) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_002742125.1.net.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_002742125.1.net.summary.bb speciesOrder GCF_002742125.1 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.214 track synNetGCF_002742125.1 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s001 chainType=c05 shortLabel Rambouillet sheep synNet longLabel Rambouillet sheep/GCF_002742125.1_Oar_rambouillet_v1.0 (2017-11-02) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_002742125.1.synNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_002742125.1.synNet.summary.bb speciesOrder GCF_002742125.1 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.214 track rbestNetGCF_002742125.1 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s001 chainType=c06 shortLabel Rambouillet sheep rbestNet longLabel Rambouillet sheep/GCF_002742125.1_Oar_rambouillet_v1.0 (2017-11-02) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_002742125.1.rbestNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_002742125.1.rbestNet.summary.bb speciesOrder GCF_002742125.1 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.214 track liftOverNetGCF_002742125.1 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s001 chainType=c07 shortLabel Rambouillet sheep liftOverNet longLabel Rambouillet sheep/GCF_002742125.1_Oar_rambouillet_v1.0 (2017-11-02) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_002742125.1.liftOverNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.GCF_002742125.1.liftOverNet.summary.bb speciesOrder GCF_002742125.1 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 0.214 track netOviAri4 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s002 chainType=c04 shortLabel Sheep/oviAri4 mafNet longLabel Sheep/oviAri4/oviAri4 (Nov. 2015) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri4.net.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri4.net.summary.bb speciesOrder oviAri4 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 2.868 track synNetOviAri4 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s002 chainType=c05 shortLabel Sheep/oviAri4 synNet longLabel Sheep/oviAri4/oviAri4 (Nov. 2015) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri4.synNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri4.synNet.summary.bb speciesOrder oviAri4 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 2.868 track rbestNetOviAri4 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s002 chainType=c06 shortLabel Sheep/oviAri4 rbestNet longLabel Sheep/oviAri4/oviAri4 (Nov. 2015) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri4.rbestNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri4.rbestNet.summary.bb speciesOrder oviAri4 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 2.868 track liftOverNetOviAri4 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s002 chainType=c07 shortLabel Sheep/oviAri4 liftOverNet longLabel Sheep/oviAri4/oviAri4 (Nov. 2015) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri4.liftOverNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri4.liftOverNet.summary.bb speciesOrder oviAri4 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 2.868 track netOviAri3 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s003 chainType=c04 shortLabel Sheep/oviAri3 mafNet longLabel Sheep/oviAri3/oviAri3 (Aug. 2012) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri3.net.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri3.net.summary.bb speciesOrder oviAri3 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 4.434 track synNetOviAri3 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s003 chainType=c05 shortLabel Sheep/oviAri3 synNet longLabel Sheep/oviAri3/oviAri3 (Aug. 2012) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri3.synNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri3.synNet.summary.bb speciesOrder oviAri3 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 4.434 track rbestNetOviAri3 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s003 chainType=c06 shortLabel Sheep/oviAri3 rbestNet longLabel Sheep/oviAri3/oviAri3 (Aug. 2012) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri3.rbestNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri3.rbestNet.summary.bb speciesOrder oviAri3 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 4.434 track liftOverNetOviAri3 parent GCF_016772045.1_ARS-UI_Ramb_v2.0MafNetViewnet off subGroups view=align species=s003 chainType=c07 shortLabel Sheep/oviAri3 liftOverNet longLabel Sheep/oviAri3/oviAri3 (Aug. 2012) Chained Alignments type bigMaf bigDataUrl bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri3.liftOverNet.bb summary bbi/GCF_016772045.1_ARS-UI_Ramb_v2.0.oviAri3.liftOverNet.summary.bb speciesOrder oviAri3 html html/GCF_016772045.1_ARS-UI_Ramb_v2.0.chainNet priority 4.434