# Assembly name: ASM1688851v1 # Organism name: Shimia biformata (a-proteobacteria) # Infraspecific name: strain=JCM 18818 # Taxid: 1294299 # BioSample: SAMN17774994 # BioProject: PRJNA699376 # Submitter: Ministry of Natural Resources & Second Institute of Oceanography, Ministry of Natural Resources # Date: 2021-02-14 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAFEJK01 # Assembly method: SPAdes v. 3.10.1 # Expected final version: no # Genome coverage: 100.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_016888515.1 # RefSeq assembly accession: GCF_016888515.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_016888525.1 GCF_016888525.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_3105326_cov_166.925 unplaced-scaffold na na JAFEJK010000001.1 = NZ_JAFEJK010000001.1 Primary Assembly 3105326 na NODE_2_length_357254_cov_169.091 unplaced-scaffold na na JAFEJK010000002.1 = NZ_JAFEJK010000002.1 Primary Assembly 357254 na NODE_3_length_264427_cov_170.979 unplaced-scaffold na na JAFEJK010000003.1 = NZ_JAFEJK010000003.1 Primary Assembly 264427 na NODE_4_length_113678_cov_167.93 unplaced-scaffold na na JAFEJK010000004.1 = NZ_JAFEJK010000004.1 Primary Assembly 113678 na NODE_5_length_79991_cov_233.65 unplaced-scaffold na na JAFEJK010000005.1 = NZ_JAFEJK010000005.1 Primary Assembly 79991 na NODE_6_length_5973_cov_321.735 unplaced-scaffold na na JAFEJK010000006.1 = NZ_JAFEJK010000006.1 Primary Assembly 5973 na NODE_7_length_5401_cov_176.286 unplaced-scaffold na na JAFEJK010000007.1 = NZ_JAFEJK010000007.1 Primary Assembly 5401 na NODE_8_length_1411_cov_331.629 unplaced-scaffold na na JAFEJK010000008.1 = NZ_JAFEJK010000008.1 Primary Assembly 1411 na NODE_9_length_617_cov_354.485 unplaced-scaffold na na JAFEJK010000009.1 = NZ_JAFEJK010000009.1 Primary Assembly 617 na NODE_10_length_561_cov_178.091 unplaced-scaffold na na JAFEJK010000010.1 = NZ_JAFEJK010000010.1 Primary Assembly 561 na NODE_12_length_279_cov_0.722772 unplaced-scaffold na na JAFEJK010000011.1 = NZ_JAFEJK010000011.1 Primary Assembly 279 na NODE_13_length_279_cov_0.722772 unplaced-scaffold na na JAFEJK010000012.1 = NZ_JAFEJK010000012.1 Primary Assembly 279 na NODE_14_length_276_cov_0.733668 unplaced-scaffold na na JAFEJK010000013.1 = NZ_JAFEJK010000013.1 Primary Assembly 276 na NODE_15_length_274_cov_0.741117 unplaced-scaffold na na JAFEJK010000014.1 = NZ_JAFEJK010000014.1 Primary Assembly 274 na NODE_16_length_273_cov_0.744898 unplaced-scaffold na na JAFEJK010000015.1 = NZ_JAFEJK010000015.1 Primary Assembly 273 na NODE_17_length_270_cov_1.51295 unplaced-scaffold na na JAFEJK010000016.1 = NZ_JAFEJK010000016.1 Primary Assembly 270 na NODE_18_length_270_cov_0.756477 unplaced-scaffold na na JAFEJK010000017.1 = NZ_JAFEJK010000017.1 Primary Assembly 270 na NODE_19_length_269_cov_0.760417 unplaced-scaffold na na JAFEJK010000018.1 = NZ_JAFEJK010000018.1 Primary Assembly 269 na NODE_20_length_267_cov_0.768421 unplaced-scaffold na na JAFEJK010000019.1 = NZ_JAFEJK010000019.1 Primary Assembly 267 na NODE_21_length_266_cov_0.767196 unplaced-scaffold na na JAFEJK010000020.1 = NZ_JAFEJK010000020.1 Primary Assembly 266 na NODE_22_length_258_cov_0.80663 unplaced-scaffold na na JAFEJK010000021.1 = NZ_JAFEJK010000021.1 Primary Assembly 258 na NODE_23_length_258_cov_0.773481 unplaced-scaffold na na JAFEJK010000022.1 = NZ_JAFEJK010000022.1 Primary Assembly 258 na NODE_24_length_257_cov_0.811111 unplaced-scaffold na na JAFEJK010000023.1 = NZ_JAFEJK010000023.1 Primary Assembly 257 na NODE_25_length_254_cov_0.824859 unplaced-scaffold na na JAFEJK010000024.1 = NZ_JAFEJK010000024.1 Primary Assembly 254 na NODE_26_length_254_cov_0.824859 unplaced-scaffold na na JAFEJK010000025.1 = NZ_JAFEJK010000025.1 Primary Assembly 254 na NODE_27_length_252_cov_1.66857 unplaced-scaffold na na JAFEJK010000026.1 = NZ_JAFEJK010000026.1 Primary Assembly 252 na NODE_28_length_246_cov_0.863905 unplaced-scaffold na na JAFEJK010000027.1 = NZ_JAFEJK010000027.1 Primary Assembly 246 na NODE_29_length_240_cov_0.895706 unplaced-scaffold na na JAFEJK010000028.1 = NZ_JAFEJK010000028.1 Primary Assembly 240 na NODE_30_length_240_cov_0.809816 unplaced-scaffold na na JAFEJK010000029.1 = NZ_JAFEJK010000029.1 Primary Assembly 240 na NODE_31_length_233_cov_1.87179 unplaced-scaffold na na JAFEJK010000030.1 = NZ_JAFEJK010000030.1 Primary Assembly 233 na