# Assembly name: ASM1690855v1 # Organism name: Alkaliphilus hydrothermalis (firmicutes) # Infraspecific name: strain=DSM 25890 # Taxid: 1482730 # BioSample: SAMN17619974 # BioProject: PRJNA695616 # Submitter: DOE Joint Genome Institute # Date: 2021-02-19 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAFBEE01 # Assembly method: SPAdes v. 3.14.1 # Expected final version: no # Genome coverage: 301.0x # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_016908555.1 # RefSeq assembly accession: GCF_016908555.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_016908585.1 GCF_016908585.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Ga0454045_01 unplaced-scaffold na na JAFBEE010000001.1 = NZ_JAFBEE010000001.1 Primary Assembly 343446 na Ga0454045_02 unplaced-scaffold na na JAFBEE010000002.1 = NZ_JAFBEE010000002.1 Primary Assembly 296452 na Ga0454045_03 unplaced-scaffold na na JAFBEE010000003.1 = NZ_JAFBEE010000003.1 Primary Assembly 198133 na Ga0454045_04 unplaced-scaffold na na JAFBEE010000004.1 = NZ_JAFBEE010000004.1 Primary Assembly 183172 na Ga0454045_05 unplaced-scaffold na na JAFBEE010000005.1 = NZ_JAFBEE010000005.1 Primary Assembly 170046 na Ga0454045_06 unplaced-scaffold na na JAFBEE010000006.1 = NZ_JAFBEE010000006.1 Primary Assembly 147306 na Ga0454045_07 unplaced-scaffold na na JAFBEE010000007.1 = NZ_JAFBEE010000007.1 Primary Assembly 132178 na Ga0454045_08 unplaced-scaffold na na JAFBEE010000008.1 = NZ_JAFBEE010000008.1 Primary Assembly 118688 na Ga0454045_09 unplaced-scaffold na na JAFBEE010000009.1 = NZ_JAFBEE010000009.1 Primary Assembly 118097 na Ga0454045_10 unplaced-scaffold na na JAFBEE010000010.1 = NZ_JAFBEE010000010.1 Primary Assembly 109069 na Ga0454045_11 unplaced-scaffold na na JAFBEE010000011.1 = NZ_JAFBEE010000011.1 Primary Assembly 89582 na Ga0454045_12 unplaced-scaffold na na JAFBEE010000012.1 = NZ_JAFBEE010000012.1 Primary Assembly 88903 na Ga0454045_13 unplaced-scaffold na na JAFBEE010000013.1 = NZ_JAFBEE010000013.1 Primary Assembly 84654 na Ga0454045_14 unplaced-scaffold na na JAFBEE010000014.1 = NZ_JAFBEE010000014.1 Primary Assembly 83081 na Ga0454045_15 unplaced-scaffold na na JAFBEE010000015.1 = NZ_JAFBEE010000015.1 Primary Assembly 73784 na Ga0454045_16 unplaced-scaffold na na JAFBEE010000016.1 = NZ_JAFBEE010000016.1 Primary Assembly 68162 na Ga0454045_17 unplaced-scaffold na na JAFBEE010000017.1 = NZ_JAFBEE010000017.1 Primary Assembly 61384 na Ga0454045_18 unplaced-scaffold na na JAFBEE010000018.1 = NZ_JAFBEE010000018.1 Primary Assembly 58295 na Ga0454045_19 unplaced-scaffold na na JAFBEE010000019.1 = NZ_JAFBEE010000019.1 Primary Assembly 55580 na Ga0454045_20 unplaced-scaffold na na JAFBEE010000020.1 = NZ_JAFBEE010000020.1 Primary Assembly 51106 na Ga0454045_21 unplaced-scaffold na na JAFBEE010000021.1 = NZ_JAFBEE010000021.1 Primary Assembly 50340 na Ga0454045_22 unplaced-scaffold na na JAFBEE010000022.1 = NZ_JAFBEE010000022.1 Primary Assembly 46343 na Ga0454045_23 unplaced-scaffold na na JAFBEE010000023.1 = NZ_JAFBEE010000023.1 Primary Assembly 43801 na Ga0454045_24 unplaced-scaffold na na JAFBEE010000024.1 = NZ_JAFBEE010000024.1 Primary Assembly 41339 na Ga0454045_25 unplaced-scaffold na na JAFBEE010000025.1 = NZ_JAFBEE010000025.1 Primary Assembly 34444 na Ga0454045_26 unplaced-scaffold na na JAFBEE010000026.1 = NZ_JAFBEE010000026.1 Primary Assembly 34281 na Ga0454045_27 unplaced-scaffold na na JAFBEE010000027.1 = NZ_JAFBEE010000027.1 Primary Assembly 33191 na Ga0454045_28 unplaced-scaffold na na JAFBEE010000028.1 = NZ_JAFBEE010000028.1 Primary Assembly 31744 na Ga0454045_29 unplaced-scaffold na na JAFBEE010000029.1 = NZ_JAFBEE010000029.1 Primary Assembly 28103 na Ga0454045_30 unplaced-scaffold na na JAFBEE010000030.1 = NZ_JAFBEE010000030.1 Primary Assembly 26232 na Ga0454045_31 unplaced-scaffold na na JAFBEE010000031.1 = NZ_JAFBEE010000031.1 Primary Assembly 23200 na Ga0454045_32 unplaced-scaffold na na JAFBEE010000032.1 = NZ_JAFBEE010000032.1 Primary Assembly 23079 na Ga0454045_33 unplaced-scaffold na na JAFBEE010000033.1 = NZ_JAFBEE010000033.1 Primary Assembly 22609 na Ga0454045_34 unplaced-scaffold na na JAFBEE010000034.1 = NZ_JAFBEE010000034.1 Primary Assembly 20339 na Ga0454045_35 unplaced-scaffold na na JAFBEE010000035.1 = NZ_JAFBEE010000035.1 Primary Assembly 18865 na Ga0454045_36 unplaced-scaffold na na JAFBEE010000036.1 = NZ_JAFBEE010000036.1 Primary Assembly 12531 na Ga0454045_37 unplaced-scaffold na na JAFBEE010000037.1 = NZ_JAFBEE010000037.1 Primary Assembly 8823 na Ga0454045_38 unplaced-scaffold na na JAFBEE010000038.1 = NZ_JAFBEE010000038.1 Primary Assembly 6982 na Ga0454045_39 unplaced-scaffold na na JAFBEE010000039.1 = NZ_JAFBEE010000039.1 Primary Assembly 6980 na Ga0454045_40 unplaced-scaffold na na JAFBEE010000040.1 = NZ_JAFBEE010000040.1 Primary Assembly 5823 na Ga0454045_41 unplaced-scaffold na na JAFBEE010000041.1 = NZ_JAFBEE010000041.1 Primary Assembly 3414 na Ga0454045_42 unplaced-scaffold na na JAFBEE010000042.1 = NZ_JAFBEE010000042.1 Primary Assembly 2453 na Ga0454045_43 unplaced-scaffold na na JAFBEE010000043.1 = NZ_JAFBEE010000043.1 Primary Assembly 2315 na Ga0454045_44 unplaced-scaffold na na JAFBEE010000044.1 = NZ_JAFBEE010000044.1 Primary Assembly 2239 na Ga0454045_45 unplaced-scaffold na na JAFBEE010000045.1 = NZ_JAFBEE010000045.1 Primary Assembly 1933 na Ga0454045_46 unplaced-scaffold na na JAFBEE010000046.1 = NZ_JAFBEE010000046.1 Primary Assembly 1907 na Ga0454045_47 unplaced-scaffold na na JAFBEE010000047.1 = NZ_JAFBEE010000047.1 Primary Assembly 1775 na Ga0454045_48 unplaced-scaffold na na JAFBEE010000048.1 = NZ_JAFBEE010000048.1 Primary Assembly 1739 na Ga0454045_49 unplaced-scaffold na na JAFBEE010000049.1 = NZ_JAFBEE010000049.1 Primary Assembly 1662 na Ga0454045_50 unplaced-scaffold na na JAFBEE010000050.1 = NZ_JAFBEE010000050.1 Primary Assembly 1467 na Ga0454045_51 unplaced-scaffold na na JAFBEE010000051.1 = NZ_JAFBEE010000051.1 Primary Assembly 1462 na Ga0454045_52 unplaced-scaffold na na JAFBEE010000052.1 = NZ_JAFBEE010000052.1 Primary Assembly 1307 na Ga0454045_53 unplaced-scaffold na na JAFBEE010000053.1 = NZ_JAFBEE010000053.1 Primary Assembly 1052 na Ga0454045_54 unplaced-scaffold na na JAFBEE010000054.1 = NZ_JAFBEE010000054.1 Primary Assembly 1050 na