# Assembly name: ASM1691917v1 # Organism name: Leptospira ainlahdjerensis (bacteria) # Infraspecific name: strain=201903070 # Taxid: 2810033 # BioSample: SAMN17767090 # BioProject: PRJNA480513 # Submitter: INRS-Institut Armand-Frappier # Date: 2021-02-22 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAFFPU01 # Assembly method: CLC Genomics Workbench v. 9 # Expected final version: yes # Genome coverage: 87x # Sequencing technology: Illumina NextSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_016919175.1 # RefSeq assembly accession: GCF_016919175.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_016919195.1 GCF_016919195.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_0056 unplaced-scaffold na na JAFFPU010000001.1 = NZ_JAFFPU010000001.1 Primary Assembly 8602 na contig_0055 unplaced-scaffold na na JAFFPU010000002.1 = NZ_JAFFPU010000002.1 Primary Assembly 11655 na contig_0024 unplaced-scaffold na na JAFFPU010000003.1 = NZ_JAFFPU010000003.1 Primary Assembly 110218 na contig_0017 unplaced-scaffold na na JAFFPU010000004.1 = NZ_JAFFPU010000004.1 Primary Assembly 143335 na contig_0067 unplaced-scaffold na na JAFFPU010000005.1 = NZ_JAFFPU010000005.1 Primary Assembly 3044 na contig_0022 unplaced-scaffold na na JAFFPU010000006.1 = NZ_JAFFPU010000006.1 Primary Assembly 127817 na contig_0014 unplaced-scaffold na na JAFFPU010000007.1 = NZ_JAFFPU010000007.1 Primary Assembly 28526 na contig_0004 unplaced-scaffold na na JAFFPU010000008.1 = NZ_JAFFPU010000008.1 Primary Assembly 8967 na contig_0088 unplaced-scaffold na na JAFFPU010000009.1 = NZ_JAFFPU010000009.1 Primary Assembly 253 na contig_0046 unplaced-scaffold na na JAFFPU010000010.1 = NZ_JAFFPU010000010.1 Primary Assembly 32503 na contig_0006 unplaced-scaffold na na JAFFPU010000011.1 = NZ_JAFFPU010000011.1 Primary Assembly 98194 na contig_0016 unplaced-scaffold na na JAFFPU010000012.1 = NZ_JAFFPU010000012.1 Primary Assembly 172442 na contig_0049 unplaced-scaffold na na JAFFPU010000013.1 = NZ_JAFFPU010000013.1 Primary Assembly 24706 na contig_0043 unplaced-scaffold na na JAFFPU010000014.1 = NZ_JAFFPU010000014.1 Primary Assembly 22577 na contig_0057 unplaced-scaffold na na JAFFPU010000015.1 = NZ_JAFFPU010000015.1 Primary Assembly 7383 na contig_0021 unplaced-scaffold na na JAFFPU010000016.1 = NZ_JAFFPU010000016.1 Primary Assembly 130461 na contig_0032 unplaced-scaffold na na JAFFPU010000017.1 = NZ_JAFFPU010000017.1 Primary Assembly 44937 na contig_0027 unplaced-scaffold na na JAFFPU010000018.1 = NZ_JAFFPU010000018.1 Primary Assembly 56858 na contig_0068 unplaced-scaffold na na JAFFPU010000019.1 = NZ_JAFFPU010000019.1 Primary Assembly 2644 na contig_0028 unplaced-scaffold na na JAFFPU010000020.1 = NZ_JAFFPU010000020.1 Primary Assembly 47221 na contig_0069 unplaced-scaffold na na JAFFPU010000021.1 = NZ_JAFFPU010000021.1 Primary Assembly 2117 na contig_0007 unplaced-scaffold na na JAFFPU010000022.1 = NZ_JAFFPU010000022.1 Primary Assembly 68802 na contig_0074 unplaced-scaffold na na JAFFPU010000023.1 = NZ_JAFFPU010000023.1 Primary Assembly 1581 na contig_0011 unplaced-scaffold na na JAFFPU010000024.1 = NZ_JAFFPU010000024.1 Primary Assembly 284888 na contig_0081 unplaced-scaffold na na JAFFPU010000025.1 = NZ_JAFFPU010000025.1 Primary Assembly 585 na contig_0045 unplaced-scaffold na na JAFFPU010000026.1 = NZ_JAFFPU010000026.1 Primary Assembly 35135 na contig_0047 unplaced-scaffold na na JAFFPU010000027.1 = NZ_JAFFPU010000027.1 Primary Assembly 30493 na contig_0005 unplaced-scaffold na na JAFFPU010000028.1 = NZ_JAFFPU010000028.1 Primary Assembly 80578 na contig_0020 unplaced-scaffold na na JAFFPU010000029.1 = NZ_JAFFPU010000029.1 Primary Assembly 134204 na contig_0023 unplaced-scaffold na na JAFFPU010000030.1 = NZ_JAFFPU010000030.1 Primary Assembly 127634 na contig_0035 unplaced-scaffold na na JAFFPU010000031.1 = NZ_JAFFPU010000031.1 Primary Assembly 72007 na contig_0048 unplaced-scaffold na na JAFFPU010000032.1 = NZ_JAFFPU010000032.1 Primary Assembly 25478 na contig_0003 unplaced-scaffold na na JAFFPU010000033.1 = NZ_JAFFPU010000033.1 Primary Assembly 161308 na contig_0041 unplaced-scaffold na na JAFFPU010000034.1 = NZ_JAFFPU010000034.1 Primary Assembly 60635 na contig_0015 unplaced-scaffold na na JAFFPU010000035.1 = NZ_JAFFPU010000035.1 Primary Assembly 186456 na contig_0059 unplaced-scaffold na na JAFFPU010000036.1 = NZ_JAFFPU010000036.1 Primary Assembly 5281 na contig_0031 unplaced-scaffold na na JAFFPU010000037.1 = NZ_JAFFPU010000037.1 Primary Assembly 36585 na contig_0029 unplaced-scaffold na na JAFFPU010000038.1 = NZ_JAFFPU010000038.1 Primary Assembly 100552 na contig_0084 unplaced-scaffold na na JAFFPU010000039.1 = NZ_JAFFPU010000039.1 Primary Assembly 578 na contig_0063 unplaced-scaffold na na JAFFPU010000040.1 = NZ_JAFFPU010000040.1 Primary Assembly 3926 na contig_0033 unplaced-scaffold na na JAFFPU010000041.1 = NZ_JAFFPU010000041.1 Primary Assembly 80874 na contig_0009 unplaced-scaffold na na JAFFPU010000042.1 = NZ_JAFFPU010000042.1 Primary Assembly 145878 na contig_0054 unplaced-scaffold na na JAFFPU010000043.1 = NZ_JAFFPU010000043.1 Primary Assembly 13688 na contig_0012 unplaced-scaffold na na JAFFPU010000044.1 = NZ_JAFFPU010000044.1 Primary Assembly 244128 na contig_0038 unplaced-scaffold na na JAFFPU010000045.1 = NZ_JAFFPU010000045.1 Primary Assembly 33812 na contig_0077 unplaced-scaffold na na JAFFPU010000046.1 = NZ_JAFFPU010000046.1 Primary Assembly 837 na contig_0060 unplaced-scaffold na na JAFFPU010000047.1 = NZ_JAFFPU010000047.1 Primary Assembly 5177 na contig_0037 unplaced-scaffold na na JAFFPU010000048.1 = NZ_JAFFPU010000048.1 Primary Assembly 69015 na contig_0065 unplaced-scaffold na na JAFFPU010000049.1 = NZ_JAFFPU010000049.1 Primary Assembly 3781 na contig_0073 unplaced-scaffold na na JAFFPU010000050.1 = NZ_JAFFPU010000050.1 Primary Assembly 1780 na contig_0018 unplaced-scaffold na na JAFFPU010000051.1 = NZ_JAFFPU010000051.1 Primary Assembly 86901 na contig_0064 unplaced-scaffold na na JAFFPU010000052.1 = NZ_JAFFPU010000052.1 Primary Assembly 3834 na contig_0053 unplaced-scaffold na na JAFFPU010000053.1 = NZ_JAFFPU010000053.1 Primary Assembly 13749 na contig_0058 unplaced-scaffold na na JAFFPU010000054.1 = NZ_JAFFPU010000054.1 Primary Assembly 7350 na contig_0066 unplaced-scaffold na na JAFFPU010000055.1 = NZ_JAFFPU010000055.1 Primary Assembly 3239 na contig_0010 unplaced-scaffold na na JAFFPU010000056.1 = NZ_JAFFPU010000056.1 Primary Assembly 108497 na contig_0070 unplaced-scaffold na na JAFFPU010000057.1 = NZ_JAFFPU010000057.1 Primary Assembly 1975 na contig_0019 unplaced-scaffold na na JAFFPU010000058.1 = NZ_JAFFPU010000058.1 Primary Assembly 51096 na contig_0044 unplaced-scaffold na na JAFFPU010000059.1 = NZ_JAFFPU010000059.1 Primary Assembly 14332 na contig_0087 unplaced-scaffold na na JAFFPU010000060.1 = NZ_JAFFPU010000060.1 Primary Assembly 364 na contig_0002 unplaced-scaffold na na JAFFPU010000061.1 = NZ_JAFFPU010000061.1 Primary Assembly 43835 na contig_0078 unplaced-scaffold na na JAFFPU010000062.1 = NZ_JAFFPU010000062.1 Primary Assembly 728 na contig_0036 unplaced-scaffold na na JAFFPU010000063.1 = NZ_JAFFPU010000063.1 Primary Assembly 69998 na contig_0061 unplaced-scaffold na na JAFFPU010000064.1 = NZ_JAFFPU010000064.1 Primary Assembly 5043 na contig_0075 unplaced-scaffold na na JAFFPU010000065.1 = NZ_JAFFPU010000065.1 Primary Assembly 874 na contig_0052 unplaced-scaffold na na JAFFPU010000066.1 = NZ_JAFFPU010000066.1 Primary Assembly 15163 na contig_0013 unplaced-scaffold na na JAFFPU010000067.1 = NZ_JAFFPU010000067.1 Primary Assembly 160204 na contig_0008 unplaced-scaffold na na JAFFPU010000068.1 = NZ_JAFFPU010000068.1 Primary Assembly 83595 na contig_0030 unplaced-scaffold na na JAFFPU010000069.1 = NZ_JAFFPU010000069.1 Primary Assembly 95940 na contig_0039 unplaced-scaffold na na JAFFPU010000070.1 = NZ_JAFFPU010000070.1 Primary Assembly 29455 na contig_0079 unplaced-scaffold na na JAFFPU010000071.1 = NZ_JAFFPU010000071.1 Primary Assembly 596 na contig_0076 unplaced-scaffold na na JAFFPU010000072.1 = NZ_JAFFPU010000072.1 Primary Assembly 866 na contig_0040 unplaced-scaffold na na JAFFPU010000073.1 = NZ_JAFFPU010000073.1 Primary Assembly 63037 na contig_0025 unplaced-scaffold na na JAFFPU010000074.1 = NZ_JAFFPU010000074.1 Primary Assembly 107758 na contig_0001 unplaced-scaffold na na JAFFPU010000075.1 = NZ_JAFFPU010000075.1 Primary Assembly 497031 na contig_0034 unplaced-scaffold na na JAFFPU010000076.1 = NZ_JAFFPU010000076.1 Primary Assembly 74939 na contig_0050 unplaced-scaffold na na JAFFPU010000077.1 = NZ_JAFFPU010000077.1 Primary Assembly 23741 na contig_0071 unplaced-scaffold na na JAFFPU010000078.1 = NZ_JAFFPU010000078.1 Primary Assembly 1907 na contig_0072 unplaced-scaffold na na JAFFPU010000079.1 = NZ_JAFFPU010000079.1 Primary Assembly 1881 na contig_0051 unplaced-scaffold na na JAFFPU010000080.1 = NZ_JAFFPU010000080.1 Primary Assembly 15414 na contig_0086 unplaced-scaffold na na JAFFPU010000081.1 = NZ_JAFFPU010000081.1 Primary Assembly 443 na contig_0026 unplaced-scaffold na na JAFFPU010000082.1 = NZ_JAFFPU010000082.1 Primary Assembly 106929 na contig_0083 unplaced-scaffold na na JAFFPU010000083.1 = NZ_JAFFPU010000083.1 Primary Assembly 584 na contig_0082 unplaced-scaffold na na JAFFPU010000084.1 = NZ_JAFFPU010000084.1 Primary Assembly 584 na contig_0080 unplaced-scaffold na na JAFFPU010000085.1 = NZ_JAFFPU010000085.1 Primary Assembly 592 na contig_0042 unplaced-scaffold na na JAFFPU010000086.1 = NZ_JAFFPU010000086.1 Primary Assembly 46405 na contig_0062 unplaced-scaffold na na JAFFPU010000087.1 = NZ_JAFFPU010000087.1 Primary Assembly 4416 na contig_0085 unplaced-scaffold na na JAFFPU010000088.1 = NZ_JAFFPU010000088.1 Primary Assembly 461 na