# Assembly name: ASM1731534v1 # Organism name: Streptococcus vaginalis (firmicutes) # Infraspecific name: strain=P1L01 # Taxid: 2748301 # BioSample: SAMN17831968 # BioProject: PRJNA700462 # Submitter: Ming Chuan University # Date: 2021-03-10 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAFINR01 # Assembly method: SPAdes v. 3.10.1 # Expected final version: no # Genome coverage: 856.0x # Sequencing technology: Illumina NovaSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_017315345.1 # RefSeq assembly accession: GCF_017315345.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017315355.1 GCF_017315355.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_446779_cov_847.37 unplaced-scaffold na na JAFINR010000001.1 = NZ_JAFINR010000001.1 Primary Assembly 446779 na NODE_2_length_247386_cov_916.342 unplaced-scaffold na na JAFINR010000002.1 = NZ_JAFINR010000002.1 Primary Assembly 247386 na NODE_3_length_136406_cov_758.056 unplaced-scaffold na na JAFINR010000003.1 = NZ_JAFINR010000003.1 Primary Assembly 136406 na NODE_4_length_118896_cov_914.04 unplaced-scaffold na na JAFINR010000004.1 = NZ_JAFINR010000004.1 Primary Assembly 118896 na NODE_5_length_115448_cov_781.796 unplaced-scaffold na na JAFINR010000005.1 = NZ_JAFINR010000005.1 Primary Assembly 115448 na NODE_6_length_114419_cov_823.719 unplaced-scaffold na na JAFINR010000006.1 = NZ_JAFINR010000006.1 Primary Assembly 114419 na NODE_7_length_102597_cov_770.906 unplaced-scaffold na na JAFINR010000007.1 = NZ_JAFINR010000007.1 Primary Assembly 102597 na NODE_8_length_100614_cov_798.659 unplaced-scaffold na na JAFINR010000008.1 = NZ_JAFINR010000008.1 Primary Assembly 100614 na NODE_9_length_88652_cov_869.618 unplaced-scaffold na na JAFINR010000009.1 = NZ_JAFINR010000009.1 Primary Assembly 88652 na NODE_10_length_77231_cov_878.458 unplaced-scaffold na na JAFINR010000010.1 = NZ_JAFINR010000010.1 Primary Assembly 77231 na NODE_11_length_70763_cov_805.798 unplaced-scaffold na na JAFINR010000011.1 = NZ_JAFINR010000011.1 Primary Assembly 70763 na NODE_12_length_61978_cov_835.2 unplaced-scaffold na na JAFINR010000012.1 = NZ_JAFINR010000012.1 Primary Assembly 61978 na NODE_13_length_52497_cov_806.631 unplaced-scaffold na na JAFINR010000013.1 = NZ_JAFINR010000013.1 Primary Assembly 52497 na NODE_14_length_47926_cov_881.449 unplaced-scaffold na na JAFINR010000014.1 = NZ_JAFINR010000014.1 Primary Assembly 47926 na NODE_15_length_42349_cov_929.787 unplaced-scaffold na na JAFINR010000015.1 = NZ_JAFINR010000015.1 Primary Assembly 42349 na NODE_16_length_39044_cov_961.514 unplaced-scaffold na na JAFINR010000016.1 = NZ_JAFINR010000016.1 Primary Assembly 39044 na NODE_17_length_37816_cov_752.677 unplaced-scaffold na na JAFINR010000017.1 = NZ_JAFINR010000017.1 Primary Assembly 37816 na NODE_18_length_34775_cov_856.836 unplaced-scaffold na na JAFINR010000018.1 = NZ_JAFINR010000018.1 Primary Assembly 34775 na NODE_19_length_24908_cov_830.83 unplaced-scaffold na na JAFINR010000019.1 = NZ_JAFINR010000019.1 Primary Assembly 24908 na NODE_20_length_22623_cov_881.623 unplaced-scaffold na na JAFINR010000020.1 = NZ_JAFINR010000020.1 Primary Assembly 22623 na NODE_21_length_21917_cov_748.002 unplaced-scaffold na na JAFINR010000021.1 = NZ_JAFINR010000021.1 Primary Assembly 21917 na NODE_22_length_21714_cov_898.75 unplaced-scaffold na na JAFINR010000022.1 = NZ_JAFINR010000022.1 Primary Assembly 21714 na NODE_23_length_17125_cov_962.164 unplaced-scaffold na na JAFINR010000023.1 = NZ_JAFINR010000023.1 Primary Assembly 17125 na NODE_24_length_10090_cov_771.18 unplaced-scaffold na na JAFINR010000024.1 = NZ_JAFINR010000024.1 Primary Assembly 10090 na NODE_25_length_7628_cov_850.966 unplaced-scaffold na na JAFINR010000025.1 = NZ_JAFINR010000025.1 Primary Assembly 7628 na NODE_26_length_5316_cov_2899.42 unplaced-scaffold na na JAFINR010000026.1 = NZ_JAFINR010000026.1 Primary Assembly 5316 na NODE_27_length_3502_cov_908.475 unplaced-scaffold na na JAFINR010000027.1 = NZ_JAFINR010000027.1 Primary Assembly 3502 na NODE_28_length_3173_cov_960.224 unplaced-scaffold na na JAFINR010000028.1 = NZ_JAFINR010000028.1 Primary Assembly 3173 na NODE_29_length_2473_cov_775.399 unplaced-scaffold na na JAFINR010000029.1 = NZ_JAFINR010000029.1 Primary Assembly 2473 na NODE_30_length_2193_cov_1762.76 unplaced-scaffold na na JAFINR010000030.1 = NZ_JAFINR010000030.1 Primary Assembly 2193 na NODE_31_length_1581_cov_1792.01 unplaced-scaffold na na JAFINR010000031.1 = NZ_JAFINR010000031.1 Primary Assembly 1581 na NODE_32_length_1440_cov_2381.74 unplaced-scaffold na na JAFINR010000032.1 = NZ_JAFINR010000032.1 Primary Assembly 1440 na NODE_33_length_1382_cov_841.511 unplaced-scaffold na na JAFINR010000033.1 = NZ_JAFINR010000033.1 Primary Assembly 1382 na NODE_34_length_1303_cov_887.955 unplaced-scaffold na na JAFINR010000034.1 = NZ_JAFINR010000034.1 Primary Assembly 1303 na NODE_35_length_1052_cov_3909.46 unplaced-scaffold na na JAFINR010000035.1 = NZ_JAFINR010000035.1 Primary Assembly 1052 na NODE_36_length_958_cov_1534.76 unplaced-scaffold na na JAFINR010000036.1 = NZ_JAFINR010000036.1 Primary Assembly 958 na NODE_37_length_828_cov_1712.67 unplaced-scaffold na na JAFINR010000037.1 = NZ_JAFINR010000037.1 Primary Assembly 828 na NODE_38_length_810_cov_2591.54 unplaced-scaffold na na JAFINR010000038.1 = NZ_JAFINR010000038.1 Primary Assembly 810 na NODE_39_length_705_cov_887.341 unplaced-scaffold na na JAFINR010000039.1 = NZ_JAFINR010000039.1 Primary Assembly 705 na NODE_40_length_594_cov_8656.78 unplaced-scaffold na na JAFINR010000040.1 = NZ_JAFINR010000040.1 Primary Assembly 594 na NODE_41_length_592_cov_1757.43 unplaced-scaffold na na JAFINR010000041.1 = NZ_JAFINR010000041.1 Primary Assembly 592 na NODE_42_length_471_cov_1716.32 unplaced-scaffold na na JAFINR010000042.1 = NZ_JAFINR010000042.1 Primary Assembly 471 na NODE_43_length_396_cov_1666.21 unplaced-scaffold na na JAFINR010000043.1 = NZ_JAFINR010000043.1 Primary Assembly 396 na NODE_44_length_389_cov_748.978 unplaced-scaffold na na JAFINR010000044.1 = NZ_JAFINR010000044.1 Primary Assembly 389 na NODE_45_length_352_cov_892.08 unplaced-scaffold na na JAFINR010000045.1 = NZ_JAFINR010000045.1 Primary Assembly 352 na NODE_46_length_352_cov_863.004 unplaced-scaffold na na JAFINR010000046.1 = NZ_JAFINR010000046.1 Primary Assembly 352 na NODE_47_length_320_cov_654.901 unplaced-scaffold na na JAFINR010000047.1 = NZ_JAFINR010000047.1 Primary Assembly 320 na