# Assembly name: ASM1731618v1 # Organism name: Candidatus Vagococcus giribetii (firmicutes) # Infraspecific name: strain=DIV0080 # Taxid: 2230876 # BioSample: SAMN09399635 # BioProject: PRJNA313452 # Submitter: Broad Institute # Date: 2021-03-10 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAFLVX01 # Assembly method: CLC genomics workbench v. v8.0.3 # Expected final version: yes # Genome coverage: 103x # Sequencing technology: Illumina Hiseq 2500 2X250 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_017316185.1 # RefSeq assembly accession: GCF_017316185.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017316195.1 GCF_017316195.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold5.1 unplaced-scaffold na na JAFLVX010000001.1 = NZ_JAFLVX010000001.1 Primary Assembly 5332 na scaffold5.2 unplaced-scaffold na na JAFLVX010000002.1 = NZ_JAFLVX010000002.1 Primary Assembly 113369 na scaffold5.3 unplaced-scaffold na na JAFLVX010000003.1 = NZ_JAFLVX010000003.1 Primary Assembly 60557 na scaffold5.4 unplaced-scaffold na na JAFLVX010000004.1 = NZ_JAFLVX010000004.1 Primary Assembly 116399 na scaffold5.5 unplaced-scaffold na na JAFLVX010000005.1 = NZ_JAFLVX010000005.1 Primary Assembly 69781 na scaffold5.6 unplaced-scaffold na na JAFLVX010000006.1 = NZ_JAFLVX010000006.1 Primary Assembly 73662 na scaffold5.7 unplaced-scaffold na na JAFLVX010000007.1 = NZ_JAFLVX010000007.1 Primary Assembly 94661 na scaffold5.8 unplaced-scaffold na na JAFLVX010000008.1 = NZ_JAFLVX010000008.1 Primary Assembly 35810 na scaffold5.9 unplaced-scaffold na na JAFLVX010000009.1 = NZ_JAFLVX010000009.1 Primary Assembly 140686 na scaffold5.10 unplaced-scaffold na na JAFLVX010000010.1 = NZ_JAFLVX010000010.1 Primary Assembly 4872 na scaffold5.11 unplaced-scaffold na na JAFLVX010000011.1 = NZ_JAFLVX010000011.1 Primary Assembly 152564 na scaffold5.12 unplaced-scaffold na na JAFLVX010000012.1 = NZ_JAFLVX010000012.1 Primary Assembly 31488 na scaffold5.13 unplaced-scaffold na na JAFLVX010000013.1 = NZ_JAFLVX010000013.1 Primary Assembly 15979 na scaffold5.14 unplaced-scaffold na na JAFLVX010000014.1 = NZ_JAFLVX010000014.1 Primary Assembly 125405 na scaffold5.15 unplaced-scaffold na na JAFLVX010000015.1 = NZ_JAFLVX010000015.1 Primary Assembly 211212 na scaffold5.16 unplaced-scaffold na na JAFLVX010000016.1 = NZ_JAFLVX010000016.1 Primary Assembly 121608 na scaffold5.17 unplaced-scaffold na na JAFLVX010000017.1 = NZ_JAFLVX010000017.1 Primary Assembly 28897 na scaffold5.18 unplaced-scaffold na na JAFLVX010000018.1 = NZ_JAFLVX010000018.1 Primary Assembly 250629 na scaffold5.19 unplaced-scaffold na na JAFLVX010000019.1 = NZ_JAFLVX010000019.1 Primary Assembly 75702 na scaffold5.20 unplaced-scaffold na na JAFLVX010000020.1 = NZ_JAFLVX010000020.1 Primary Assembly 95474 na scaffold5.21 unplaced-scaffold na na JAFLVX010000021.1 = NZ_JAFLVX010000021.1 Primary Assembly 94182 na scaffold5.22 unplaced-scaffold na na JAFLVX010000022.1 = NZ_JAFLVX010000022.1 Primary Assembly 53101 na scaffold5.23 unplaced-scaffold na na JAFLVX010000023.1 = NZ_JAFLVX010000023.1 Primary Assembly 26500 na scaffold5.24 unplaced-scaffold na na JAFLVX010000024.1 = NZ_JAFLVX010000024.1 Primary Assembly 50424 na scaffold5.25 unplaced-scaffold na na JAFLVX010000025.1 = NZ_JAFLVX010000025.1 Primary Assembly 96246 na scaffold5.26 unplaced-scaffold na na JAFLVX010000026.1 = NZ_JAFLVX010000026.1 Primary Assembly 90190 na scaffold5.27 unplaced-scaffold na na JAFLVX010000027.1 = NZ_JAFLVX010000027.1 Primary Assembly 8265 na scaffold5.28 unplaced-scaffold na na JAFLVX010000028.1 = NZ_JAFLVX010000028.1 Primary Assembly 47840 na scaffold5.29 unplaced-scaffold na na JAFLVX010000029.1 = NZ_JAFLVX010000029.1 Primary Assembly 31219 na scaffold5.30 unplaced-scaffold na na JAFLVX010000030.1 = NZ_JAFLVX010000030.1 Primary Assembly 14805 na scaffold5.31 unplaced-scaffold na na JAFLVX010000031.1 = NZ_JAFLVX010000031.1 Primary Assembly 54267 na scaffold5.32 unplaced-scaffold na na JAFLVX010000032.1 = NZ_JAFLVX010000032.1 Primary Assembly 68570 na scaffold5.33 unplaced-scaffold na na JAFLVX010000033.1 = NZ_JAFLVX010000033.1 Primary Assembly 1035 na scaffold5.34 unplaced-scaffold na na JAFLVX010000034.1 = NZ_JAFLVX010000034.1 Primary Assembly 26669 na scaffold5.35 unplaced-scaffold na na JAFLVX010000035.1 = NZ_JAFLVX010000035.1 Primary Assembly 69337 na scaffold5.36 unplaced-scaffold na na JAFLVX010000036.1 = NZ_JAFLVX010000036.1 Primary Assembly 35113 na scaffold5.37 unplaced-scaffold na na JAFLVX010000037.1 = NZ_JAFLVX010000037.1 Primary Assembly 27988 na scaffold5.38 unplaced-scaffold na na JAFLVX010000038.1 = NZ_JAFLVX010000038.1 Primary Assembly 23060 na scaffold5.39 unplaced-scaffold na na JAFLVX010000039.1 = NZ_JAFLVX010000039.1 Primary Assembly 6453 na scaffold5.40 unplaced-scaffold na na JAFLVX010000040.1 = NZ_JAFLVX010000040.1 Primary Assembly 3365 na scaffold5.41 unplaced-scaffold na na JAFLVX010000041.1 = NZ_JAFLVX010000041.1 Primary Assembly 21855 na scaffold5.42 unplaced-scaffold na na JAFLVX010000042.1 = NZ_JAFLVX010000042.1 Primary Assembly 8671 na scaffold5.43 unplaced-scaffold na na JAFLVX010000043.1 = NZ_JAFLVX010000043.1 Primary Assembly 1666 na scaffold5.44 unplaced-scaffold na na JAFLVX010000044.1 = NZ_JAFLVX010000044.1 Primary Assembly 3971 na scaffold5.45 unplaced-scaffold na na JAFLVX010000045.1 = NZ_JAFLVX010000045.1 Primary Assembly 1522 na scaffold5.46 unplaced-scaffold na na JAFLVX010000046.1 = NZ_JAFLVX010000046.1 Primary Assembly 13757 na scaffold5.47 unplaced-scaffold na na JAFLVX010000047.1 = NZ_JAFLVX010000047.1 Primary Assembly 2647 na scaffold5.48 unplaced-scaffold na na JAFLVX010000048.1 = NZ_JAFLVX010000048.1 Primary Assembly 9780 na scaffold5.49 unplaced-scaffold na na JAFLVX010000049.1 = NZ_JAFLVX010000049.1 Primary Assembly 2393 na scaffold5.50 unplaced-scaffold na na JAFLVX010000050.1 = NZ_JAFLVX010000050.1 Primary Assembly 4976 na scaffold5.51 unplaced-scaffold na na JAFLVX010000051.1 = NZ_JAFLVX010000051.1 Primary Assembly 1453 na scaffold5.52 unplaced-scaffold na na JAFLVX010000052.1 = NZ_JAFLVX010000052.1 Primary Assembly 2855 na