# Assembly name: ASM1787457v1 # Organism name: Lactobacillus colini (firmicutes) # Infraspecific name: strain=DSM 101872 # Taxid: 1819254 # BioSample: SAMN18247535 # BioProject: PRJNA709627 # Submitter: DOE Joint Genome Institute # Date: 2021-04-08 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAGGLU01 # Assembly method: SPAdes v. 3.14.1 # Expected final version: no # Genome coverage: 317.0x # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_017874575.1 # RefSeq assembly accession: GCF_017874575.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017874585.1 GCF_017874585.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Ga0454154_01 unplaced-scaffold na na JAGGLU010000001.1 = NZ_JAGGLU010000001.1 Primary Assembly 393419 na Ga0454154_02 unplaced-scaffold na na JAGGLU010000002.1 = NZ_JAGGLU010000002.1 Primary Assembly 274952 na Ga0454154_03 unplaced-scaffold na na JAGGLU010000003.1 = NZ_JAGGLU010000003.1 Primary Assembly 219419 na Ga0454154_04 unplaced-scaffold na na JAGGLU010000004.1 = NZ_JAGGLU010000004.1 Primary Assembly 174023 na Ga0454154_05 unplaced-scaffold na na JAGGLU010000005.1 = NZ_JAGGLU010000005.1 Primary Assembly 151979 na Ga0454154_06 unplaced-scaffold na na JAGGLU010000006.1 = NZ_JAGGLU010000006.1 Primary Assembly 149377 na Ga0454154_07 unplaced-scaffold na na JAGGLU010000007.1 = NZ_JAGGLU010000007.1 Primary Assembly 111753 na Ga0454154_08 unplaced-scaffold na na JAGGLU010000008.1 = NZ_JAGGLU010000008.1 Primary Assembly 97772 na Ga0454154_09 unplaced-scaffold na na JAGGLU010000009.1 = NZ_JAGGLU010000009.1 Primary Assembly 86645 na Ga0454154_10 unplaced-scaffold na na JAGGLU010000010.1 = NZ_JAGGLU010000010.1 Primary Assembly 78984 na Ga0454154_11 unplaced-scaffold na na JAGGLU010000011.1 = NZ_JAGGLU010000011.1 Primary Assembly 77126 na Ga0454154_12 unplaced-scaffold na na JAGGLU010000012.1 = NZ_JAGGLU010000012.1 Primary Assembly 64154 na Ga0454154_13 unplaced-scaffold na na JAGGLU010000013.1 = NZ_JAGGLU010000013.1 Primary Assembly 58696 na Ga0454154_14 unplaced-scaffold na na JAGGLU010000014.1 = NZ_JAGGLU010000014.1 Primary Assembly 48704 na Ga0454154_15 unplaced-scaffold na na JAGGLU010000015.1 = NZ_JAGGLU010000015.1 Primary Assembly 48007 na Ga0454154_16 unplaced-scaffold na na JAGGLU010000016.1 = NZ_JAGGLU010000016.1 Primary Assembly 35962 na Ga0454154_17 unplaced-scaffold na na JAGGLU010000017.1 = NZ_JAGGLU010000017.1 Primary Assembly 26023 na Ga0454154_18 unplaced-scaffold na na JAGGLU010000018.1 = NZ_JAGGLU010000018.1 Primary Assembly 22997 na Ga0454154_19 unplaced-scaffold na na JAGGLU010000019.1 = NZ_JAGGLU010000019.1 Primary Assembly 21613 na Ga0454154_20 unplaced-scaffold na na JAGGLU010000020.1 = NZ_JAGGLU010000020.1 Primary Assembly 13562 na Ga0454154_21 unplaced-scaffold na na JAGGLU010000021.1 = NZ_JAGGLU010000021.1 Primary Assembly 13447 na Ga0454154_22 unplaced-scaffold na na JAGGLU010000022.1 = NZ_JAGGLU010000022.1 Primary Assembly 13113 na Ga0454154_23 unplaced-scaffold na na JAGGLU010000023.1 = NZ_JAGGLU010000023.1 Primary Assembly 7708 na Ga0454154_24 unplaced-scaffold na na JAGGLU010000024.1 = NZ_JAGGLU010000024.1 Primary Assembly 6574 na Ga0454154_25 unplaced-scaffold na na JAGGLU010000025.1 = NZ_JAGGLU010000025.1 Primary Assembly 5922 na Ga0454154_26 unplaced-scaffold na na JAGGLU010000026.1 = NZ_JAGGLU010000026.1 Primary Assembly 3741 na Ga0454154_27 unplaced-scaffold na na JAGGLU010000027.1 = NZ_JAGGLU010000027.1 Primary Assembly 3193 na Ga0454154_28 unplaced-scaffold na na JAGGLU010000028.1 = NZ_JAGGLU010000028.1 Primary Assembly 2846 na Ga0454154_29 unplaced-scaffold na na JAGGLU010000029.1 = NZ_JAGGLU010000029.1 Primary Assembly 2603 na Ga0454154_30 unplaced-scaffold na na JAGGLU010000030.1 = NZ_JAGGLU010000030.1 Primary Assembly 2235 na Ga0454154_31 unplaced-scaffold na na JAGGLU010000031.1 = NZ_JAGGLU010000031.1 Primary Assembly 1809 na Ga0454154_32 unplaced-scaffold na na JAGGLU010000032.1 = NZ_JAGGLU010000032.1 Primary Assembly 1681 na Ga0454154_33 unplaced-scaffold na na JAGGLU010000033.1 = NZ_JAGGLU010000033.1 Primary Assembly 1468 na Ga0454154_34 unplaced-scaffold na na JAGGLU010000034.1 = NZ_JAGGLU010000034.1 Primary Assembly 1023 na