# Assembly name: ASM1815269v1 # Organism name: Drosophila takahashii (flies) # Taxid: 29030 # BioSample: SAMN16729628 # BioProject: PRJNA675888 # Submitter: Stanford University # Date: 2021-04-28 # Assembly type: haploid # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAECXN01 # Assembly method: Flye v. 2.6; Racon v. 1.4.12; Medaka v. 0.9.1; Pilon v. 1.23 # Expected final version: no # Genome coverage: 149.5x # Sequencing technology: Oxford Nanopore MinION; Illumina NextSeq # GenBank assembly accession: GCA_018152695.1 # RefSeq assembly accession: GCF_018152695.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018152745.1 GCF_018152745.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na JAECXN010000001.1 = NW_025323455.1 Primary Assembly 26170623 na contig_10 unplaced-scaffold na na JAECXN010000010.1 = NW_025323456.1 Primary Assembly 20264 na contig_100 unplaced-scaffold na na JAECXN010000100.1 = NW_025323457.1 Primary Assembly 195071 na contig_101 unplaced-scaffold na na JAECXN010000101.1 = NW_025323458.1 Primary Assembly 3412927 na contig_102 unplaced-scaffold na na JAECXN010000102.1 = NW_025323459.1 Primary Assembly 8014881 na contig_103 unplaced-scaffold na na JAECXN010000103.1 = NW_025323460.1 Primary Assembly 469836 na contig_104 unplaced-scaffold na na JAECXN010000104.1 = NW_025323461.1 Primary Assembly 5373 na contig_105 unplaced-scaffold na na JAECXN010000105.1 = NW_025323462.1 Primary Assembly 172273 na contig_106 unplaced-scaffold na na JAECXN010000106.1 = NW_025323463.1 Primary Assembly 623767 na contig_107 unplaced-scaffold na na JAECXN010000107.1 = NW_025323464.1 Primary Assembly 12590702 na contig_108 unplaced-scaffold na na JAECXN010000108.1 = NW_025323465.1 Primary Assembly 378338 na contig_109 unplaced-scaffold na na JAECXN010000109.1 = NW_025323466.1 Primary Assembly 182289 na contig_11 unplaced-scaffold na na JAECXN010000011.1 = NW_025323467.1 Primary Assembly 14755 na contig_110 unplaced-scaffold na na JAECXN010000110.1 = NW_025323468.1 Primary Assembly 10781894 na contig_111 unplaced-scaffold na na JAECXN010000111.1 = NW_025323469.1 Primary Assembly 951 na contig_112 unplaced-scaffold na na JAECXN010000112.1 = NW_025323470.1 Primary Assembly 5007 na contig_113 unplaced-scaffold na na JAECXN010000113.1 = NW_025323471.1 Primary Assembly 5199 na contig_114 unplaced-scaffold na na JAECXN010000114.1 = NW_025323472.1 Primary Assembly 854719 na contig_115 unplaced-scaffold na na JAECXN010000115.1 = NW_025323473.1 Primary Assembly 59760 na contig_116 unplaced-scaffold na na JAECXN010000116.1 = NW_025323474.1 Primary Assembly 12075919 na contig_117 unplaced-scaffold na na JAECXN010000117.1 = NW_025323475.1 Primary Assembly 224044 na contig_118 unplaced-scaffold na na JAECXN010000118.1 = NW_025323476.1 Primary Assembly 10112099 na contig_119 unplaced-scaffold na na JAECXN010000119.1 = NW_025323477.1 Primary Assembly 12520703 na contig_12 unplaced-scaffold na na JAECXN010000012.1 = NW_025323478.1 Primary Assembly 1670 na contig_120 unplaced-scaffold na na JAECXN010000120.1 = NW_025323479.1 Primary Assembly 155468 na contig_121 unplaced-scaffold na na JAECXN010000121.1 = NW_025323480.1 Primary Assembly 11427507 na contig_122 unplaced-scaffold na na JAECXN010000122.1 = NW_025323481.1 Primary Assembly 122613 na contig_13 unplaced-scaffold na na JAECXN010000013.1 = NW_025323482.1 Primary Assembly 28209 na contig_14 unplaced-scaffold na na JAECXN010000014.1 = NW_025323483.1 Primary Assembly 100705 na contig_15 unplaced-scaffold na na JAECXN010000015.1 = NW_025323484.1 Primary Assembly 100252 na contig_16 unplaced-scaffold na na JAECXN010000016.1 = NW_025323485.1 Primary Assembly 5794583 na contig_17 unplaced-scaffold na na JAECXN010000017.1 = NW_025323486.1 Primary Assembly 1848 na contig_18 unplaced-scaffold na na JAECXN010000018.1 = NW_025323487.1 Primary Assembly 70583 na contig_19 unplaced-scaffold na na JAECXN010000019.1 = NW_025323488.1 Primary Assembly 70624 na contig_2 unplaced-scaffold na na JAECXN010000002.1 = NW_025323489.1 Primary Assembly 29820 na contig_20 unplaced-scaffold na na JAECXN010000020.1 = NW_025323490.1 Primary Assembly 552 na contig_21 unplaced-scaffold na na JAECXN010000021.1 = NW_025323491.1 Primary Assembly 545 na contig_22 unplaced-scaffold na na JAECXN010000022.1 = NW_025323492.1 Primary Assembly 15501 na contig_23 unplaced-scaffold na na JAECXN010000023.1 = NW_025323493.1 Primary Assembly 27553 na contig_24 unplaced-scaffold na na JAECXN010000024.1 = NW_025323494.1 Primary Assembly 2504 na contig_25 unplaced-scaffold na na JAECXN010000025.1 = NW_025323495.1 Primary Assembly 64578 na contig_26 unplaced-scaffold na na JAECXN010000026.1 = NW_025323496.1 Primary Assembly 60817 na contig_27 unplaced-scaffold na na JAECXN010000027.1 = NW_025323497.1 Primary Assembly 55807 na contig_28 unplaced-scaffold na na JAECXN010000028.1 = NW_025323498.1 Primary Assembly 55253 na contig_29 unplaced-scaffold na na JAECXN010000029.1 = NW_025323499.1 Primary Assembly 51454 na contig_3 unplaced-scaffold na na JAECXN010000003.1 = NW_025323500.1 Primary Assembly 21766836 na contig_30 unplaced-scaffold na na JAECXN010000030.1 = NW_025323501.1 Primary Assembly 44811 na contig_31 unplaced-scaffold na na JAECXN010000031.1 = NW_025323502.1 Primary Assembly 44183 na contig_32 unplaced-scaffold na na JAECXN010000032.1 = NW_025323503.1 Primary Assembly 37514 na contig_33 unplaced-scaffold na na JAECXN010000033.1 = NW_025323504.1 Primary Assembly 30986 na contig_34 unplaced-scaffold na na JAECXN010000034.1 = NW_025323505.1 Primary Assembly 426 na contig_35 unplaced-scaffold na na JAECXN010000035.1 = NW_025323506.1 Primary Assembly 3447280 na contig_36 unplaced-scaffold na na JAECXN010000036.1 = NW_025323507.1 Primary Assembly 2529 na contig_37 unplaced-scaffold na na JAECXN010000037.1 = NW_025323508.1 Primary Assembly 11074 na contig_38 unplaced-scaffold na na JAECXN010000038.1 = NW_025323509.1 Primary Assembly 21004 na contig_39 unplaced-scaffold na na JAECXN010000039.1 = NW_025323510.1 Primary Assembly 14978 na contig_4 unplaced-scaffold na na JAECXN010000004.1 = NW_025323511.1 Primary Assembly 12380692 na contig_40 unplaced-scaffold na na JAECXN010000040.1 = NW_025323512.1 Primary Assembly 1111 na contig_41 unplaced-scaffold na na JAECXN010000041.1 = NW_025323513.1 Primary Assembly 13684 na contig_42 unplaced-scaffold na na JAECXN010000042.1 = NW_025323514.1 Primary Assembly 13096 na contig_43 unplaced-scaffold na na JAECXN010000043.1 = NW_025323515.1 Primary Assembly 10627 na contig_44 unplaced-scaffold na na JAECXN010000044.1 = NW_025323516.1 Primary Assembly 11443 na contig_45 unplaced-scaffold na na JAECXN010000045.1 = NW_025323517.1 Primary Assembly 9743 na contig_46 unplaced-scaffold na na JAECXN010000046.1 = NW_025323518.1 Primary Assembly 9193 na contig_47 unplaced-scaffold na na JAECXN010000047.1 = NW_025323519.1 Primary Assembly 8671 na contig_48 unplaced-scaffold na na JAECXN010000048.1 = NW_025323520.1 Primary Assembly 8216 na contig_49 unplaced-scaffold na na JAECXN010000049.1 = NW_025323521.1 Primary Assembly 9040 na contig_5 unplaced-scaffold na na JAECXN010000005.1 = NW_025323522.1 Primary Assembly 813 na contig_50 unplaced-scaffold na na JAECXN010000050.1 = NW_025323523.1 Primary Assembly 7811 na contig_51 unplaced-scaffold na na JAECXN010000051.1 = NW_025323524.1 Primary Assembly 709 na contig_52 unplaced-scaffold na na JAECXN010000052.1 = NW_025323525.1 Primary Assembly 10251005 na contig_53 unplaced-scaffold na na JAECXN010000053.1 = NW_025323526.1 Primary Assembly 1010 na contig_54 unplaced-scaffold na na JAECXN010000054.1 = NW_025323527.1 Primary Assembly 5768 na contig_55 unplaced-scaffold na na JAECXN010000055.1 = NW_025323528.1 Primary Assembly 7806 na contig_56 unplaced-scaffold na na JAECXN010000056.1 = NW_025323529.1 Primary Assembly 6886 na contig_57 unplaced-scaffold na na JAECXN010000057.1 = NW_025323530.1 Primary Assembly 6921 na contig_58 unplaced-scaffold na na JAECXN010000058.1 = NW_025323531.1 Primary Assembly 6621 na contig_59 unplaced-scaffold na na JAECXN010000059.1 = NW_025323532.1 Primary Assembly 6580 na contig_6 unplaced-scaffold na na JAECXN010000006.1 = NW_025323533.1 Primary Assembly 2000 na contig_60 unplaced-scaffold na na JAECXN010000060.1 = NW_025323534.1 Primary Assembly 1444 na contig_61 unplaced-scaffold na na JAECXN010000061.1 = NW_025323535.1 Primary Assembly 3762 na contig_62 unplaced-scaffold na na JAECXN010000062.1 = NW_025323536.1 Primary Assembly 6477 na contig_63 unplaced-scaffold na na JAECXN010000063.1 = NW_025323537.1 Primary Assembly 5748 na contig_64 unplaced-scaffold na na JAECXN010000064.1 = NW_025323538.1 Primary Assembly 6148 na contig_65 unplaced-scaffold na na JAECXN010000065.1 = NW_025323539.1 Primary Assembly 6093 na contig_66 unplaced-scaffold na na JAECXN010000066.1 = NW_025323540.1 Primary Assembly 3540 na contig_67 unplaced-scaffold na na JAECXN010000067.1 = NW_025323541.1 Primary Assembly 5928 na contig_68 unplaced-scaffold na na JAECXN010000068.1 = NW_025323542.1 Primary Assembly 5739 na contig_69 unplaced-scaffold na na JAECXN010000069.1 = NW_025323543.1 Primary Assembly 5332 na contig_7 unplaced-scaffold na na JAECXN010000007.1 = NW_025323544.1 Primary Assembly 302 na contig_70 unplaced-scaffold na na JAECXN010000070.1 = NW_025323545.1 Primary Assembly 5542 na contig_71 unplaced-scaffold na na JAECXN010000071.1 = NW_025323546.1 Primary Assembly 5277 na contig_72 unplaced-scaffold na na JAECXN010000072.1 = NW_025323547.1 Primary Assembly 5110 na contig_73 unplaced-scaffold na na JAECXN010000073.1 = NW_025323548.1 Primary Assembly 5080 na contig_74 unplaced-scaffold na na JAECXN010000074.1 = NW_025323549.1 Primary Assembly 4648 na contig_75 unplaced-scaffold na na JAECXN010000075.1 = NW_025323550.1 Primary Assembly 4828 na contig_76 unplaced-scaffold na na JAECXN010000076.1 = NW_025323551.1 Primary Assembly 4696 na contig_77 unplaced-scaffold na na JAECXN010000077.1 = NW_025323552.1 Primary Assembly 4741 na contig_78 unplaced-scaffold na na JAECXN010000078.1 = NW_025323553.1 Primary Assembly 3433 na contig_79 unplaced-scaffold na na JAECXN010000079.1 = NW_025323554.1 Primary Assembly 4740 na contig_8 unplaced-scaffold na na JAECXN010000008.1 = NW_025323555.1 Primary Assembly 22635 na contig_80 unplaced-scaffold na na JAECXN010000080.1 = NW_025323556.1 Primary Assembly 4526 na contig_81 unplaced-scaffold na na JAECXN010000081.1 = NW_025323557.1 Primary Assembly 4504 na contig_82 unplaced-scaffold na na JAECXN010000082.1 = NW_025323558.1 Primary Assembly 3677 na contig_83 unplaced-scaffold na na JAECXN010000083.1 = NW_025323559.1 Primary Assembly 4014 na contig_84 unplaced-scaffold na na JAECXN010000084.1 = NW_025323560.1 Primary Assembly 1394 na contig_85 unplaced-scaffold na na JAECXN010000085.1 = NW_025323561.1 Primary Assembly 1569 na contig_86 unplaced-scaffold na na JAECXN010000086.1 = NW_025323562.1 Primary Assembly 4632 na contig_87 unplaced-scaffold na na JAECXN010000087.1 = NW_025323563.1 Primary Assembly 4120 na contig_88 unplaced-scaffold na na JAECXN010000088.1 = NW_025323564.1 Primary Assembly 3057 na contig_89 unplaced-scaffold na na JAECXN010000089.1 = NW_025323565.1 Primary Assembly 3939 na contig_9 unplaced-scaffold na na JAECXN010000009.1 = NW_025323566.1 Primary Assembly 13431 na contig_90 unplaced-scaffold na na JAECXN010000090.1 = NW_025323567.1 Primary Assembly 4019 na contig_91 unplaced-scaffold na na JAECXN010000091.1 = NW_025323568.1 Primary Assembly 3952 na contig_92 unplaced-scaffold na na JAECXN010000092.1 = NW_025323569.1 Primary Assembly 3711 na contig_93 unplaced-scaffold na na JAECXN010000093.1 = NW_025323570.1 Primary Assembly 3292 na contig_94 unplaced-scaffold na na JAECXN010000094.1 = NW_025323571.1 Primary Assembly 3459 na contig_95 unplaced-scaffold na na JAECXN010000095.1 = NW_025323572.1 Primary Assembly 3183 na contig_96 unplaced-scaffold na na JAECXN010000096.1 = NW_025323573.1 Primary Assembly 2978 na contig_97 unplaced-scaffold na na JAECXN010000097.1 = NW_025323574.1 Primary Assembly 1127 na contig_98 unplaced-scaffold na na JAECXN010000098.1 = NW_025323575.1 Primary Assembly 1016 na contig_99 unplaced-scaffold na na JAECXN010000099.1 = NW_025323576.1 Primary Assembly 596 na