# Assembly name: P.tigris_Pti1_mat1.1 # Organism name: Panthera tigris (tiger) # Isolate: Pti1 # Sex: female # Taxid: 9694 # BioSample: SAMN17054330 # BioProject: PRJNA684344 # Submitter: Texas A&M University # Date: 2021-05-13 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAEQMW01 # Assembly method: NextDenovo v. 2.2-beta.0 # Expected final version: yes # Genome coverage: 78.0x # Sequencing technology: PacBio Sequel 2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_018350195.2 # RefSeq assembly accession: GCF_018350195.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018350205.2 GCF_018350205.1 Primary Assembly ## GCF_000070435.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chrA1 assembled-molecule A1 Chromosome CM031431.1 = NC_056660.1 Primary Assembly 238220823 na chrA2 assembled-molecule A2 Chromosome CM031432.1 = NC_056661.1 Primary Assembly 167824101 na chrA3 assembled-molecule A3 Chromosome CM031433.1 = NC_056662.1 Primary Assembly 139420020 na chrB1 assembled-molecule B1 Chromosome CM031434.1 = NC_056663.1 Primary Assembly 204240962 na chrB2 assembled-molecule B2 Chromosome CM031435.1 = NC_056664.1 Primary Assembly 151172648 na chrB3 assembled-molecule B3 Chromosome CM031436.1 = NC_056665.1 Primary Assembly 146942463 na chrB4 assembled-molecule B4 Chromosome CM031437.1 = NC_056666.1 Primary Assembly 140883259 na chrC1 assembled-molecule C1 Chromosome CM031438.1 = NC_056667.1 Primary Assembly 219880392 na chrC2 assembled-molecule C2 Chromosome CM031439.1 = NC_056668.1 Primary Assembly 157485960 na chrD1 assembled-molecule D1 Chromosome CM031440.1 = NC_056669.1 Primary Assembly 114653560 na chrD2 assembled-molecule D2 Chromosome CM031441.1 = NC_056670.1 Primary Assembly 86999983 na chrD3 assembled-molecule D3 Chromosome CM031442.1 = NC_056671.1 Primary Assembly 94015955 na chrD4 assembled-molecule D4 Chromosome CM031443.1 = NC_056672.1 Primary Assembly 93600330 na chrE1 assembled-molecule E1 Chromosome CM031444.1 = NC_056673.1 Primary Assembly 61289036 na chrE2 assembled-molecule E2 Chromosome CM031445.1 = NC_056674.1 Primary Assembly 61603977 na chrE3 assembled-molecule E3 Chromosome CM031446.1 = NC_056675.1 Primary Assembly 41508437 na chrF2 assembled-molecule F2 Chromosome CM031447.1 = NC_056676.1 Primary Assembly 82905707 na chrF3 assembled-molecule F3 Chromosome CM031448.1 = NC_056678.1 Primary Assembly 69613107 na chrX assembled-molecule X Chromosome CM031430.1 = NC_056677.1 Primary Assembly 127706282 na chrA1_random_Un_scaffold_36-1 unlocalized-scaffold A1 Chromosome JAEQMW010000020.1 = NW_024962142.1 Primary Assembly 320000 na chrA1_random_Un_scaffold_58 unlocalized-scaffold A1 Chromosome JAEQMW010000063.1 = NW_024962143.1 Primary Assembly 282857 na chrA1_random_Un_scaffold_72 unlocalized-scaffold A1 Chromosome JAEQMW010000074.1 = NW_024962144.1 Primary Assembly 190688 na chrA2_random_Un_scaffold_116 unlocalized-scaffold A2 Chromosome JAEQMW010000115.1 = NW_024962145.1 Primary Assembly 73635 na chrA2_random_Un_scaffold_118 unlocalized-scaffold A2 Chromosome JAEQMW010000117.1 = NW_024962146.1 Primary Assembly 69786 na chrA3_random_Un_scaffold_61 unlocalized-scaffold A3 Chromosome JAEQMW010000065.1 = NW_024962147.1 Primary Assembly 255968 na chrA3_random_Un_scaffold_65 unlocalized-scaffold A3 Chromosome JAEQMW010000068.1 = NW_024962148.1 Primary Assembly 217317 na chrA3_random_Un_scaffold_70 unlocalized-scaffold A3 Chromosome JAEQMW010000072.1 = NW_024962149.1 Primary Assembly 194393 na chrA3_random_Un_scaffold_79 unlocalized-scaffold A3 Chromosome JAEQMW010000080.1 = NW_024962150.1 Primary Assembly 168844 na chrA3_random_Un_scaffold_92 unlocalized-scaffold A3 Chromosome JAEQMW010000093.1 = NW_024962151.1 Primary Assembly 141612 na chrA3_random_Un_scaffold_94 unlocalized-scaffold A3 Chromosome JAEQMW010000095.1 = NW_024962152.1 Primary Assembly 138730 na chrA3_random_Un_scaffold_97 unlocalized-scaffold A3 Chromosome JAEQMW010000098.1 = NW_024962153.1 Primary Assembly 134073 na chrA3_random_Un_scaffold_100 unlocalized-scaffold A3 Chromosome JAEQMW010000101.1 = NW_024962154.1 Primary Assembly 119631 na chrA3_random_Un_scaffold_106 unlocalized-scaffold A3 Chromosome JAEQMW010000107.1 = NW_024962155.1 Primary Assembly 101836 na chrA3_random_Un_scaffold_110 unlocalized-scaffold A3 Chromosome JAEQMW010000109.1 = NW_024962156.1 Primary Assembly 86450 na chrA3_random_Un_scaffold_121 unlocalized-scaffold A3 Chromosome JAEQMW010000120.1 = NW_024962157.1 Primary Assembly 67700 na chrB1_random_Un_scaffold_117 unlocalized-scaffold B1 Chromosome JAEQMW010000116.1 = NW_024962158.1 Primary Assembly 72820 na chrB2_random_Un_scaffold_74 unlocalized-scaffold B2 Chromosome JAEQMW010000076.1 = NW_024962159.1 Primary Assembly 186291 na chrB2_random_Un_scaffold_113 unlocalized-scaffold B2 Chromosome JAEQMW010000112.1 = NW_024962160.1 Primary Assembly 79360 na chrB4_random_Un_scaffold_102 unlocalized-scaffold B4 Chromosome JAEQMW010000103.1 = NW_024962161.1 Primary Assembly 115078 na chrB4_random_Un_scaffold_126 unlocalized-scaffold B4 Chromosome JAEQMW010000125.1 = NW_024962162.1 Primary Assembly 57052 na chrC1_random_Un_scaffold_105 unlocalized-scaffold C1 Chromosome JAEQMW010000106.1 = NW_024962163.1 Primary Assembly 104828 na chrC1_random_Un_scaffold_130 unlocalized-scaffold C1 Chromosome JAEQMW010000129.1 = NW_024962164.1 Primary Assembly 42557 na chrC2_random_Un_scaffold_76 unlocalized-scaffold C2 Chromosome JAEQMW010000077.1 = NW_024962165.1 Primary Assembly 179394 na chrC2_random_Un_scaffold_86 unlocalized-scaffold C2 Chromosome JAEQMW010000087.1 = NW_024962166.1 Primary Assembly 155717 na chrD3_random_Un_scaffold_51 unlocalized-scaffold D3 Chromosome JAEQMW010000058.1 = NW_024962167.1 Primary Assembly 394258 na chrD3_random_Un_scaffold_66 unlocalized-scaffold D3 Chromosome JAEQMW010000069.1 = NW_024962168.1 Primary Assembly 216987 na chrD3_random_Un_scaffold_84 unlocalized-scaffold D3 Chromosome JAEQMW010000085.1 = NW_024962169.1 Primary Assembly 160548 na chrD3_random_Un_scaffold_91 unlocalized-scaffold D3 Chromosome JAEQMW010000092.1 = NW_024962170.1 Primary Assembly 142812 na chrD3_random_Un_scaffold_96 unlocalized-scaffold D3 Chromosome JAEQMW010000097.1 = NW_024962171.1 Primary Assembly 135877 na chrD3_random_Un_scaffold_109 unlocalized-scaffold D3 Chromosome JAEQMW010000108.1 = NW_024962172.1 Primary Assembly 89947 na chrD3_random_Un_scaffold_123 unlocalized-scaffold D3 Chromosome JAEQMW010000122.1 = NW_024962173.1 Primary Assembly 63623 na chrD4_random_Un_scaffold_73 unlocalized-scaffold D4 Chromosome JAEQMW010000075.1 = NW_024962174.1 Primary Assembly 186564 na chrE1_random_Un_scaffold_62 unlocalized-scaffold E1 Chromosome JAEQMW010000066.1 = NW_024962175.1 Primary Assembly 234386 na chrE1_random_Un_scaffold_69 unlocalized-scaffold E1 Chromosome JAEQMW010000071.1 = NW_024962176.1 Primary Assembly 195525 na chrF2_random_Un_scaffold_112 unlocalized-scaffold F2 Chromosome JAEQMW010000111.1 = NW_024962177.1 Primary Assembly 80186 na chrF3_random_Un_scaffold_45 unlocalized-scaffold F3 Chromosome JAEQMW010000055.1 = NW_024962182.1 Primary Assembly 768043 na chrF3_random_Un_scaffold_59 unlocalized-scaffold F3 Chromosome JAEQMW010000064.1 = NW_024962183.1 Primary Assembly 265560 na chrF3_random_Un_scaffold_68 unlocalized-scaffold F3 Chromosome JAEQMW010000070.1 = NW_024962184.1 Primary Assembly 200903 na chrF3_random_Un_scaffold_71 unlocalized-scaffold F3 Chromosome JAEQMW010000073.1 = NW_024962185.1 Primary Assembly 192410 na chrF3_random_Un_scaffold_77 unlocalized-scaffold F3 Chromosome JAEQMW010000078.1 = NW_024962186.1 Primary Assembly 178952 na chrF3_random_Un_scaffold_78 unlocalized-scaffold F3 Chromosome JAEQMW010000079.1 = NW_024962187.1 Primary Assembly 169859 na chrF3_random_Un_scaffold_81 unlocalized-scaffold F3 Chromosome JAEQMW010000082.1 = NW_024962188.1 Primary Assembly 166536 na chrF3_random_Un_scaffold_83 unlocalized-scaffold F3 Chromosome JAEQMW010000084.1 = NW_024962189.1 Primary Assembly 163663 na chrF3_random_Un_scaffold_90 unlocalized-scaffold F3 Chromosome JAEQMW010000091.1 = NW_024962190.1 Primary Assembly 144525 na chrF3_random_Un_scaffold_93 unlocalized-scaffold F3 Chromosome JAEQMW010000094.1 = NW_024962191.1 Primary Assembly 140455 na chrF3_random_Un_scaffold_98 unlocalized-scaffold F3 Chromosome JAEQMW010000099.1 = NW_024962192.1 Primary Assembly 131121 na chrF3_random_Un_scaffold_99 unlocalized-scaffold F3 Chromosome JAEQMW010000100.1 = NW_024962193.1 Primary Assembly 126213 na chrX_random_Un_scaffold_87 unlocalized-scaffold X Chromosome JAEQMW010000088.1 = NW_024962178.1 Primary Assembly 152184 na chrX_random_Un_scaffold_111 unlocalized-scaffold X Chromosome JAEQMW010000110.1 = NW_024962179.1 Primary Assembly 81391 na chrX_random_Un_scaffold_115 unlocalized-scaffold X Chromosome JAEQMW010000114.1 = NW_024962180.1 Primary Assembly 75201 na chrX_random_Un_scaffold_119 unlocalized-scaffold X Chromosome JAEQMW010000118.1 = NW_024962181.1 Primary Assembly 69630 na Un_scaffold_103 unplaced-scaffold na na JAEQMW010000104.1 = NW_024962194.1 Primary Assembly 112849 na Un_scaffold_125 unplaced-scaffold na na JAEQMW010000124.1 = NW_024962195.1 Primary Assembly 57950 na Un_scaffold_127 unplaced-scaffold na na JAEQMW010000126.1 = NW_024962196.1 Primary Assembly 56921 na MT assembled-molecule MT Mitochondrion na <> NC_010642.1 non-nuclear 16990 na