# Assembly name: ASM1869171v1 # Organism name: Phytophthora cinnamomi (downy mildews) # Infraspecific name: strain=GKB4 # Taxid: 4785 # BioSample: SAMN16706909 # BioProject: PRJNA675400 # Submitter: University of Pretoria # Date: 2021-06-03 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAFJYM01 # Assembly method: SmartDenovo v. Dec 2018 # Expected final version: yes # Genome coverage: 100.0x # Sequencing technology: Oxford Nanopore MinION; Illumina HiSeq # RefSeq category: Reference Genome # Excluded from RefSeq: genome length too large # GenBank assembly accession: GCA_018691715.1 # RefSeq assembly accession: GCF_018691715.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018691725.1 GCF_018691725.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Contig0 unplaced-scaffold na na JAFJYM010000001.1 = NW_027150933.1 Primary Assembly 4550621 na Contig1 unplaced-scaffold na na JAFJYM010000002.1 = NW_027150934.1 Primary Assembly 1422782 na Contig2 unplaced-scaffold na na JAFJYM010000003.1 = NW_027150935.1 Primary Assembly 1616762 na Contig3 unplaced-scaffold na na JAFJYM010000004.1 = NW_027150936.1 Primary Assembly 1328261 na Contig4 unplaced-scaffold na na JAFJYM010000005.1 = NW_027150937.1 Primary Assembly 1910052 na Contig5 unplaced-scaffold na na JAFJYM010000006.1 = NW_027150938.1 Primary Assembly 996295 na Contig6 unplaced-scaffold na na JAFJYM010000007.1 = NW_027150939.1 Primary Assembly 1448391 na Contig7 unplaced-scaffold na na JAFJYM010000008.1 = NW_027150940.1 Primary Assembly 1324182 na Contig8 unplaced-scaffold na na JAFJYM010000009.1 = NW_027150941.1 Primary Assembly 1051545 na Contig9 unplaced-scaffold na na JAFJYM010000010.1 = NW_027150942.1 Primary Assembly 1187988 na Contig10 unplaced-scaffold na na JAFJYM010000011.1 = NW_027150943.1 Primary Assembly 1468314 na Contig11 unplaced-scaffold na na JAFJYM010000012.1 = NW_027150944.1 Primary Assembly 611001 na Contig12 unplaced-scaffold na na JAFJYM010000013.1 = NW_027150945.1 Primary Assembly 1011010 na Contig13 unplaced-scaffold na na JAFJYM010000014.1 = NW_027150946.1 Primary Assembly 726050 na Contig14 unplaced-scaffold na na JAFJYM010000015.1 = NW_027150947.1 Primary Assembly 3404108 na Contig15 unplaced-scaffold na na JAFJYM010000016.1 = NW_027150948.1 Primary Assembly 1493173 na Contig16 unplaced-scaffold na na JAFJYM010000017.1 = NW_027150949.1 Primary Assembly 2442385 na Contig17 unplaced-scaffold na na JAFJYM010000018.1 = NW_027150950.1 Primary Assembly 2097775 na Contig18 unplaced-scaffold na na JAFJYM010000019.1 = NW_027150951.1 Primary Assembly 669087 na Contig19 unplaced-scaffold na na JAFJYM010000020.1 = NW_027150952.1 Primary Assembly 1523684 na Contig20 unplaced-scaffold na na JAFJYM010000021.1 = NW_027150953.1 Primary Assembly 438450 na Contig21 unplaced-scaffold na na JAFJYM010000022.1 = NW_027150954.1 Primary Assembly 3277763 na Contig22 unplaced-scaffold na na JAFJYM010000023.1 = NW_027150955.1 Primary Assembly 930702 na Contig23 unplaced-scaffold na na JAFJYM010000024.1 = NW_027150956.1 Primary Assembly 1702189 na Contig24 unplaced-scaffold na na JAFJYM010000025.1 = NW_027150957.1 Primary Assembly 904930 na Contig25 unplaced-scaffold na na JAFJYM010000026.1 = NW_027150958.1 Primary Assembly 528357 na Contig26 unplaced-scaffold na na JAFJYM010000027.1 = NW_027150959.1 Primary Assembly 1441876 na Contig27 unplaced-scaffold na na JAFJYM010000028.1 = NW_027150960.1 Primary Assembly 1717343 na Contig28 unplaced-scaffold na na JAFJYM010000029.1 = NW_027150961.1 Primary Assembly 852038 na Contig29 unplaced-scaffold na na JAFJYM010000030.1 = NW_027150962.1 Primary Assembly 1065046 na Contig30 unplaced-scaffold na na JAFJYM010000031.1 = NW_027150963.1 Primary Assembly 641605 na Contig31 unplaced-scaffold na na JAFJYM010000032.1 = NW_027150964.1 Primary Assembly 197733 na Contig32 unplaced-scaffold na na JAFJYM010000033.1 = NW_027150965.1 Primary Assembly 485318 na Contig33 unplaced-scaffold na na JAFJYM010000034.1 = NW_027150966.1 Primary Assembly 1488966 na Contig34 unplaced-scaffold na na JAFJYM010000035.1 = NW_027150967.1 Primary Assembly 463080 na Contig35 unplaced-scaffold na na JAFJYM010000036.1 = NW_027150968.1 Primary Assembly 759755 na Contig36 unplaced-scaffold na na JAFJYM010000037.1 = NW_027150969.1 Primary Assembly 520442 na Contig37 unplaced-scaffold na na JAFJYM010000038.1 = NW_027150970.1 Primary Assembly 1631366 na Contig38 unplaced-scaffold na na JAFJYM010000039.1 = NW_027150971.1 Primary Assembly 1964998 na Contig39 unplaced-scaffold na na JAFJYM010000040.1 = NW_027150972.1 Primary Assembly 1638128 na Contig40 unplaced-scaffold na na JAFJYM010000041.1 = NW_027150973.1 Primary Assembly 753573 na Contig41 unplaced-scaffold na na JAFJYM010000042.1 = NW_027150974.1 Primary Assembly 658950 na Contig42 unplaced-scaffold na na JAFJYM010000043.1 = NW_027150975.1 Primary Assembly 746294 na Contig43 unplaced-scaffold na na JAFJYM010000044.1 = NW_027150976.1 Primary Assembly 693791 na Contig44 unplaced-scaffold na na JAFJYM010000045.1 = NW_027150977.1 Primary Assembly 1130353 na Contig45 unplaced-scaffold na na JAFJYM010000046.1 = NW_027150978.1 Primary Assembly 971282 na Contig46 unplaced-scaffold na na JAFJYM010000047.1 = NW_027150979.1 Primary Assembly 668142 na Contig47 unplaced-scaffold na na JAFJYM010000048.1 = NW_027150980.1 Primary Assembly 459673 na Contig48 unplaced-scaffold na na JAFJYM010000049.1 = NW_027150981.1 Primary Assembly 343997 na Contig49 unplaced-scaffold na na JAFJYM010000050.1 = NW_027150982.1 Primary Assembly 1283543 na Contig50 unplaced-scaffold na na JAFJYM010000051.1 = NW_027150983.1 Primary Assembly 1619826 na Contig51 unplaced-scaffold na na JAFJYM010000052.1 = NW_027150984.1 Primary Assembly 777553 na Contig52 unplaced-scaffold na na JAFJYM010000053.1 = NW_027150985.1 Primary Assembly 287368 na Contig53 unplaced-scaffold na na JAFJYM010000054.1 = NW_027150986.1 Primary Assembly 3631472 na Contig54 unplaced-scaffold na na JAFJYM010000055.1 = NW_027150987.1 Primary Assembly 693575 na Contig55 unplaced-scaffold na na JAFJYM010000056.1 = NW_027150988.1 Primary Assembly 1341124 na Contig56 unplaced-scaffold na na JAFJYM010000057.1 = NW_027150989.1 Primary Assembly 984110 na Contig57 unplaced-scaffold na na JAFJYM010000058.1 = NW_027150990.1 Primary Assembly 626689 na Contig58 unplaced-scaffold na na JAFJYM010000059.1 = NW_027150991.1 Primary Assembly 517346 na Contig59 unplaced-scaffold na na JAFJYM010000060.1 = NW_027150992.1 Primary Assembly 355731 na Contig60 unplaced-scaffold na na JAFJYM010000061.1 = NW_027150993.1 Primary Assembly 1042756 na Contig61 unplaced-scaffold na na JAFJYM010000062.1 = NW_027150994.1 Primary Assembly 658878 na Contig62 unplaced-scaffold na na JAFJYM010000063.1 = NW_027150995.1 Primary Assembly 1031523 na Contig63 unplaced-scaffold na na JAFJYM010000064.1 = NW_027150996.1 Primary Assembly 1179480 na Contig64 unplaced-scaffold na na JAFJYM010000065.1 = NW_027150997.1 Primary Assembly 285498 na Contig65 unplaced-scaffold na na JAFJYM010000066.1 = NW_027150998.1 Primary Assembly 164323 na Contig66 unplaced-scaffold na na JAFJYM010000067.1 = NW_027150999.1 Primary Assembly 271064 na Contig67 unplaced-scaffold na na JAFJYM010000068.1 = NW_027151000.1 Primary Assembly 724470 na Contig68 unplaced-scaffold na na JAFJYM010000069.1 = NW_027151001.1 Primary Assembly 792694 na Contig69 unplaced-scaffold na na JAFJYM010000070.1 = NW_027151002.1 Primary Assembly 112563 na Contig70 unplaced-scaffold na na JAFJYM010000071.1 = NW_027151003.1 Primary Assembly 394981 na Contig71 unplaced-scaffold na na JAFJYM010000072.1 = NW_027151004.1 Primary Assembly 566921 na Contig72 unplaced-scaffold na na JAFJYM010000073.1 = NW_027151005.1 Primary Assembly 200757 na Contig73 unplaced-scaffold na na JAFJYM010000074.1 = NW_027151006.1 Primary Assembly 533421 na Contig74 unplaced-scaffold na na JAFJYM010000075.1 = NW_027151007.1 Primary Assembly 112508 na Contig75 unplaced-scaffold na na JAFJYM010000076.1 = NW_027151008.1 Primary Assembly 382269 na Contig76 unplaced-scaffold na na JAFJYM010000077.1 = NW_027151009.1 Primary Assembly 375006 na Contig77 unplaced-scaffold na na JAFJYM010000078.1 = NW_027151010.1 Primary Assembly 462883 na Contig78 unplaced-scaffold na na JAFJYM010000079.1 = NW_027151011.1 Primary Assembly 373502 na Contig79 unplaced-scaffold na na JAFJYM010000080.1 = NW_027151012.1 Primary Assembly 207913 na Contig80 unplaced-scaffold na na JAFJYM010000081.1 = NW_027151013.1 Primary Assembly 449042 na Contig81 unplaced-scaffold na na JAFJYM010000082.1 = NW_027151014.1 Primary Assembly 1304930 na Contig82 unplaced-scaffold na na JAFJYM010000083.1 = NW_027151015.1 Primary Assembly 425054 na Contig83 unplaced-scaffold na na JAFJYM010000084.1 = NW_027151016.1 Primary Assembly 913699 na Contig84 unplaced-scaffold na na JAFJYM010000085.1 = NW_027151017.1 Primary Assembly 449405 na Contig85 unplaced-scaffold na na JAFJYM010000086.1 = NW_027151018.1 Primary Assembly 346782 na Contig86 unplaced-scaffold na na JAFJYM010000087.1 = NW_027151019.1 Primary Assembly 347448 na Contig87 unplaced-scaffold na na JAFJYM010000088.1 = NW_027151020.1 Primary Assembly 422620 na Contig88 unplaced-scaffold na na JAFJYM010000089.1 = NW_027151021.1 Primary Assembly 85350 na Contig89 unplaced-scaffold na na JAFJYM010000090.1 = NW_027151022.1 Primary Assembly 171752 na Contig90 unplaced-scaffold na na JAFJYM010000091.1 = NW_027151023.1 Primary Assembly 507882 na Contig91 unplaced-scaffold na na JAFJYM010000092.1 = NW_027151024.1 Primary Assembly 121009 na Contig92 unplaced-scaffold na na JAFJYM010000093.1 = NW_027151025.1 Primary Assembly 2076555 na Contig93 unplaced-scaffold na na JAFJYM010000094.1 = NW_027151026.1 Primary Assembly 150326 na Contig94 unplaced-scaffold na na JAFJYM010000095.1 = NW_027151027.1 Primary Assembly 457741 na Contig95 unplaced-scaffold na na JAFJYM010000096.1 = NW_027151028.1 Primary Assembly 411155 na Contig96 unplaced-scaffold na na JAFJYM010000097.1 = NW_027151029.1 Primary Assembly 397215 na Contig97 unplaced-scaffold na na JAFJYM010000098.1 = NW_027151030.1 Primary Assembly 80386 na Contig98 unplaced-scaffold na na JAFJYM010000099.1 = NW_027151031.1 Primary Assembly 488137 na Contig99 unplaced-scaffold na na JAFJYM010000100.1 = NW_027151032.1 Primary Assembly 951883 na Contig100 unplaced-scaffold na na JAFJYM010000101.1 = NW_027151033.1 Primary Assembly 521187 na Contig101 unplaced-scaffold na na JAFJYM010000102.1 = NW_027151034.1 Primary Assembly 144934 na Contig102 unplaced-scaffold na na JAFJYM010000103.1 = NW_027151035.1 Primary Assembly 1279376 na Contig103 unplaced-scaffold na na JAFJYM010000104.1 = NW_027151036.1 Primary Assembly 132513 na Contig104 unplaced-scaffold na na JAFJYM010000105.1 = NW_027151037.1 Primary Assembly 1411580 na Contig105 unplaced-scaffold na na JAFJYM010000106.1 = NW_027151038.1 Primary Assembly 152019 na Contig106 unplaced-scaffold na na JAFJYM010000107.1 = NW_027151039.1 Primary Assembly 437032 na Contig107 unplaced-scaffold na na JAFJYM010000108.1 = NW_027151040.1 Primary Assembly 263376 na Contig108 unplaced-scaffold na na JAFJYM010000109.1 = NW_027151041.1 Primary Assembly 585836 na Contig109 unplaced-scaffold na na JAFJYM010000110.1 = NW_027151042.1 Primary Assembly 259013 na Contig110 unplaced-scaffold na na JAFJYM010000111.1 = NW_027151043.1 Primary Assembly 155633 na Contig111 unplaced-scaffold na na JAFJYM010000112.1 = NW_027151044.1 Primary Assembly 669690 na Contig112 unplaced-scaffold na na JAFJYM010000113.1 = NW_027151045.1 Primary Assembly 471506 na Contig113 unplaced-scaffold na na JAFJYM010000114.1 = NW_027151046.1 Primary Assembly 37436 na Contig114 unplaced-scaffold na na JAFJYM010000115.1 = NW_027151047.1 Primary Assembly 915312 na Contig115 unplaced-scaffold na na JAFJYM010000116.1 = NW_027151048.1 Primary Assembly 115738 na Contig116 unplaced-scaffold na na JAFJYM010000117.1 = NW_027151049.1 Primary Assembly 527216 na Contig117 unplaced-scaffold na na JAFJYM010000118.1 = NW_027151050.1 Primary Assembly 906902 na Contig118 unplaced-scaffold na na JAFJYM010000119.1 = NW_027151051.1 Primary Assembly 172442 na Contig119 unplaced-scaffold na na JAFJYM010000120.1 = NW_027151052.1 Primary Assembly 813853 na Contig120 unplaced-scaffold na na JAFJYM010000121.1 = NW_027151053.1 Primary Assembly 822752 na Contig121 unplaced-scaffold na na JAFJYM010000122.1 = NW_027151054.1 Primary Assembly 148483 na Contig122 unplaced-scaffold na na JAFJYM010000123.1 = NW_027151055.1 Primary Assembly 82946 na Contig123 unplaced-scaffold na na JAFJYM010000124.1 = NW_027151056.1 Primary Assembly 365241 na Contig124 unplaced-scaffold na na JAFJYM010000125.1 = NW_027151057.1 Primary Assembly 122074 na Contig125 unplaced-scaffold na na JAFJYM010000126.1 = NW_027151058.1 Primary Assembly 320206 na Contig126 unplaced-scaffold na na JAFJYM010000127.1 = NW_027151059.1 Primary Assembly 804789 na Contig127 unplaced-scaffold na na JAFJYM010000128.1 = NW_027151060.1 Primary Assembly 1059910 na Contig128 unplaced-scaffold na na JAFJYM010000129.1 = NW_027151061.1 Primary Assembly 451468 na Contig129 unplaced-scaffold na na JAFJYM010000130.1 = NW_027151062.1 Primary Assembly 566921 na Contig130 unplaced-scaffold na na JAFJYM010000131.1 = NW_027151063.1 Primary Assembly 93536 na Contig131 unplaced-scaffold na na JAFJYM010000132.1 = NW_027151064.1 Primary Assembly 630230 na Contig132 unplaced-scaffold na na JAFJYM010000133.1 = NW_027151065.1 Primary Assembly 351398 na