# Assembly name: mDroGli1.pri # Organism name: Dromiciops gliroides (monito del monte) # Isolate: mDroGli1 # Sex: female # Taxid: 33562 # BioSample: SAMN18857598 # BioProject: PRJNA728141 # Submitter: Vertebrate Genomes Project # Date: 2021-08-03 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHYBR01 # Assembly method: FALCON kit v. 1.8.1; FALCON unzip v. 1.3.7; purge_dups v. 1.2.3; Scaff10X v. 4.2; Bionano Solve v. 3.5.1_01142020; Salsa Hi-C v. 2.2; GCPP v. 1.9.0-SL-release-8.0.0+1-37-gd7b188d; longranger v. 2.2.2; freebayes v. 1.3.2; gEVAL manual curation v. 2021-04-07; VGP pipeline v. 1.6 # Expected final version: no # Genome coverage: 63.0x # Sequencing technology: PacBio Sequel II CLRQ; 10X Genomics linked reads; Bionano Genomics DLS; Arima Genomics v1 Hi-C # RefSeq category: Representative Genome # GenBank assembly accession: GCA_019393635.1 # RefSeq assembly accession: GCF_019393635.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_019395325.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_019393755.1 GCF_019393755.1 Primary Assembly ## GCA_019393765.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM033365.1 = NC_057861.1 Primary Assembly 764011478 na SUPER_2 assembled-molecule 2 Chromosome CM033366.1 = NC_057862.1 Primary Assembly 701582917 na SUPER_3 assembled-molecule 3 Chromosome CM033367.1 = NC_057863.1 Primary Assembly 670775900 na SUPER_4 assembled-molecule 4 Chromosome CM033368.1 = NC_057864.1 Primary Assembly 496996644 na SUPER_5 assembled-molecule 5 Chromosome CM033369.1 = NC_057865.1 Primary Assembly 303349291 na SUPER_6 assembled-molecule 6 Chromosome CM033370.1 = NC_057866.1 Primary Assembly 280580407 na SUPER_X assembled-molecule X Chromosome CM033371.1 = NC_057867.1 Primary Assembly 85160330 na SUPER_X_unloc_1 unlocalized-scaffold X Chromosome JAHYBR010000008.1 = NW_025316797.1 Primary Assembly 143912 na SUPER_X_unloc_2 unlocalized-scaffold X Chromosome JAHYBR010000009.1 = NW_025316798.1 Primary Assembly 124099 na SUPER_X_unloc_3 unlocalized-scaffold X Chromosome JAHYBR010000010.1 = NW_025316799.1 Primary Assembly 111962 na SUPER_X_unloc_4 unlocalized-scaffold X Chromosome JAHYBR010000011.1 = NW_025316800.1 Primary Assembly 105186 na SUPER_X_unloc_6 unlocalized-scaffold X Chromosome JAHYBR010000012.1 = NW_025316802.1 Primary Assembly 52047 na SUPER_X_unloc_5 unlocalized-scaffold X Chromosome JAHYBR010000013.1 = NW_025316801.1 Primary Assembly 88347 na SUPER_X_unloc_8 unlocalized-scaffold X Chromosome JAHYBR010000014.1 = NW_025316804.1 Primary Assembly 6360 na SUPER_X_unloc_7 unlocalized-scaffold X Chromosome JAHYBR010000015.1 = NW_025316803.1 Primary Assembly 44633 na manual_scaffold_19819_telo unplaced-scaffold na na JAHYBR010000016.1 = NW_025316806.1 Primary Assembly 31281 na manual_scaffold_19811_ctg1 unplaced-scaffold na na JAHYBR010000017.1 = NW_025316805.1 Primary Assembly 35006 na mDroGli1_MT assembled-molecule MT Mitochondrion CM033468.1 <> na non-nuclear 17310 na