# Assembly name: ASM1957865v1 # Organism name: Ricinus communis (castor bean) # Infraspecific name: ecotype=wild-type # Isolate: WT05 # Taxid: 3988 # BioSample: SAMN13269094 # BioProject: PRJNA589181 # Submitter: Wuhan Botanical Garden, University of Chinese Academy of Sciences # Date: 2021-08-12 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAABNL01 # Assembly method: Canu v. 1.7; Smartdenovo v. Feb-2018 # Expected final version: no # Genome coverage: 170.0x # Sequencing technology: Oxford Nanopore # RefSeq category: Representative Genome # GenBank assembly accession: GCA_019578655.1 # RefSeq assembly accession: GCF_019578655.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_019578665.1 GCF_019578665.1 Primary Assembly ## GCA_019578675.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chr01 assembled-molecule 1 Chromosome CM033701.1 = NC_063256.1 Primary Assembly 36693184 na Chr02 assembled-molecule 2 Chromosome CM033702.1 = NC_063257.1 Primary Assembly 34698449 na Chr03 assembled-molecule 3 Chromosome CM033703.1 = NC_063258.1 Primary Assembly 33302965 na Chr04 assembled-molecule 4 Chromosome CM033704.1 = NC_063259.1 Primary Assembly 32566337 na Chr05 assembled-molecule 5 Chromosome CM033705.1 = NC_063260.1 Primary Assembly 31927722 na Chr06 assembled-molecule 6 Chromosome CM033706.1 = NC_063261.1 Primary Assembly 29779195 na Chr07 assembled-molecule 7 Chromosome CM033707.1 = NC_063262.1 Primary Assembly 29279767 na Chr08 assembled-molecule 8 Chromosome CM033708.1 = NC_063263.1 Primary Assembly 28815829 na Chr09 assembled-molecule 9 Chromosome CM033709.1 = NC_063264.1 Primary Assembly 28210331 na Chr10 assembled-molecule 10 Chromosome CM033710.1 = NC_063265.1 Primary Assembly 26623538 na Ctg11 unplaced-scaffold na na JAABNL010000011.1 = NW_025963410.1 Primary Assembly 372276 na Ctg13 unplaced-scaffold na na JAABNL010000013.1 = NW_025963431.1 Primary Assembly 150000 na Ctg15 unplaced-scaffold na na JAABNL010000015.1 = NW_025963449.1 Primary Assembly 125000 na Ctg16 unplaced-scaffold na na JAABNL010000016.1 = NW_025963450.1 Primary Assembly 116230 na Ctg17 unplaced-scaffold na na JAABNL010000017.1 = NW_025963451.1 Primary Assembly 114025 na Ctg18 unplaced-scaffold na na JAABNL010000018.1 = NW_025963452.1 Primary Assembly 111433 na Ctg19 unplaced-scaffold na na JAABNL010000019.1 = NW_025963453.1 Primary Assembly 101632 na Ctg20 unplaced-scaffold na na JAABNL010000020.1 = NW_025963454.1 Primary Assembly 99937 na Ctg21 unplaced-scaffold na na JAABNL010000021.1 = NW_025963455.1 Primary Assembly 96674 na Ctg22 unplaced-scaffold na na JAABNL010000022.1 = NW_025963456.1 Primary Assembly 94752 na Ctg23 unplaced-scaffold na na JAABNL010000023.1 = NW_025963457.1 Primary Assembly 88062 na Ctg24 unplaced-scaffold na na JAABNL010000024.1 = NW_025963458.1 Primary Assembly 81741 na Ctg25 unplaced-scaffold na na JAABNL010000025.1 = NW_025963459.1 Primary Assembly 76822 na Ctg26 unplaced-scaffold na na JAABNL010000026.1 = NW_025963460.1 Primary Assembly 75000 na Ctg27 unplaced-scaffold na na JAABNL010000027.1 = NW_025963461.1 Primary Assembly 75000 na Ctg28 unplaced-scaffold na na JAABNL010000028.1 = NW_025963462.1 Primary Assembly 75000 na Ctg29 unplaced-scaffold na na JAABNL010000029.1 = NW_025963463.1 Primary Assembly 75000 na Ctg30 unplaced-scaffold na na JAABNL010000030.1 = NW_025963464.1 Primary Assembly 75000 na Ctg31 unplaced-scaffold na na JAABNL010000031.1 = NW_025963465.1 Primary Assembly 75000 na Ctg32 unplaced-scaffold na na JAABNL010000032.1 = NW_025963466.1 Primary Assembly 75000 na Ctg33 unplaced-scaffold na na JAABNL010000033.1 = NW_025963467.1 Primary Assembly 70047 na Ctg34 unplaced-scaffold na na JAABNL010000034.1 = NW_025963468.1 Primary Assembly 50640 na Ctg35 unplaced-scaffold na na JAABNL010000035.1 = NW_025963469.1 Primary Assembly 50000 na Ctg36 unplaced-scaffold na na JAABNL010000036.1 = NW_025963470.1 Primary Assembly 50000 na Ctg38 unplaced-scaffold na na JAABNL010000038.1 = NW_025963471.1 Primary Assembly 41731 na Ctg39 unplaced-scaffold na na JAABNL010000039.1 = NW_025963472.1 Primary Assembly 39249 na Ctg40 unplaced-scaffold na na JAABNL010000040.1 = NW_025963473.1 Primary Assembly 38760 na Ctg41 unplaced-scaffold na na JAABNL010000041.1 = NW_025963474.1 Primary Assembly 37202 na Ctg42 unplaced-scaffold na na JAABNL010000042.1 = NW_025963475.1 Primary Assembly 36240 na Ctg43 unplaced-scaffold na na JAABNL010000043.1 = NW_025963476.1 Primary Assembly 36000 na Ctg44 unplaced-scaffold na na JAABNL010000044.1 = NW_025963477.1 Primary Assembly 34862 na Ctg45 unplaced-scaffold na na JAABNL010000045.1 = NW_025963478.1 Primary Assembly 33442 na Ctg46 unplaced-scaffold na na JAABNL010000046.1 = NW_025963479.1 Primary Assembly 33338 na Ctg47 unplaced-scaffold na na JAABNL010000047.1 = NW_025963480.1 Primary Assembly 33055 na Ctg48 unplaced-scaffold na na JAABNL010000048.1 = NW_025963481.1 Primary Assembly 31000 na Ctg49 unplaced-scaffold na na JAABNL010000049.1 = NW_025963482.1 Primary Assembly 30000 na Ctg50 unplaced-scaffold na na JAABNL010000050.1 = NW_025963483.1 Primary Assembly 26193 na Ctg51 unplaced-scaffold na na JAABNL010000051.1 = NW_025963484.1 Primary Assembly 25000 na Ctg52 unplaced-scaffold na na JAABNL010000052.1 = NW_025963485.1 Primary Assembly 25000 na Ctg53 unplaced-scaffold na na JAABNL010000053.1 = NW_025963486.1 Primary Assembly 25000 na Ctg54 unplaced-scaffold na na JAABNL010000054.1 = NW_025963487.1 Primary Assembly 25000 na Ctg55 unplaced-scaffold na na JAABNL010000055.1 = NW_025963488.1 Primary Assembly 25000 na Ctg56 unplaced-scaffold na na JAABNL010000056.1 = NW_025963489.1 Primary Assembly 25000 na Ctg57 unplaced-scaffold na na JAABNL010000057.1 = NW_025963490.1 Primary Assembly 25000 na Ctg58 unplaced-scaffold na na JAABNL010000058.1 = NW_025963491.1 Primary Assembly 25000 na Ctg59 unplaced-scaffold na na JAABNL010000059.1 = NW_025963492.1 Primary Assembly 25000 na Ctg60 unplaced-scaffold na na JAABNL010000060.1 = NW_025963493.1 Primary Assembly 25000 na Ctg61 unplaced-scaffold na na JAABNL010000061.1 = NW_025963494.1 Primary Assembly 25000 na Ctg62 unplaced-scaffold na na JAABNL010000062.1 = NW_025963495.1 Primary Assembly 25000 na Ctg63 unplaced-scaffold na na JAABNL010000063.1 = NW_025963496.1 Primary Assembly 25000 na Ctg64 unplaced-scaffold na na JAABNL010000064.1 = NW_025963497.1 Primary Assembly 25000 na Ctg66 unplaced-scaffold na na JAABNL010000066.1 = NW_025963498.1 Primary Assembly 22662 na Ctg68 unplaced-scaffold na na JAABNL010000068.1 = NW_025963499.1 Primary Assembly 19302 na Ctg69 unplaced-scaffold na na JAABNL010000069.1 = NW_025963500.1 Primary Assembly 18892 na Ctg70 unplaced-scaffold na na JAABNL010000070.1 = NW_025963501.1 Primary Assembly 18139 na Ctg71 unplaced-scaffold na na JAABNL010000071.1 = NW_025963502.1 Primary Assembly 17502 na Ctg72 unplaced-scaffold na na JAABNL010000072.1 = NW_025963503.1 Primary Assembly 17465 na Ctg74 unplaced-scaffold na na JAABNL010000074.1 = NW_025963504.1 Primary Assembly 17000 na Ctg75 unplaced-scaffold na na JAABNL010000075.1 = NW_025963505.1 Primary Assembly 17000 na Ctg76 unplaced-scaffold na na JAABNL010000076.1 = NW_025963506.1 Primary Assembly 16916 na Ctg77 unplaced-scaffold na na JAABNL010000077.1 = NW_025963507.1 Primary Assembly 16533 na Ctg78 unplaced-scaffold na na JAABNL010000078.1 = NW_025963508.1 Primary Assembly 14389 na Ctg79 unplaced-scaffold na na JAABNL010000079.1 = NW_025963509.1 Primary Assembly 14185 na Ctg80 unplaced-scaffold na na JAABNL010000080.1 = NW_025963510.1 Primary Assembly 14137 na Ctg81 unplaced-scaffold na na JAABNL010000081.1 = NW_025963511.1 Primary Assembly 14000 na Ctg82 unplaced-scaffold na na JAABNL010000082.1 = NW_025963512.1 Primary Assembly 13463 na Ctg83 unplaced-scaffold na na JAABNL010000083.1 = NW_025963513.1 Primary Assembly 12671 na Ctg84 unplaced-scaffold na na JAABNL010000084.1 = NW_025963514.1 Primary Assembly 11860 na Ctg85 unplaced-scaffold na na JAABNL010000085.1 = NW_025963515.1 Primary Assembly 11747 na Ctg86 unplaced-scaffold na na JAABNL010000086.1 = NW_025963516.1 Primary Assembly 10696 na Ctg87 unplaced-scaffold na na JAABNL010000087.1 = NW_025963517.1 Primary Assembly 10305 na Ctg88 unplaced-scaffold na na JAABNL010000088.1 = NW_025963518.1 Primary Assembly 10000 na Ctg89 unplaced-scaffold na na JAABNL010000089.1 = NW_025963519.1 Primary Assembly 9798 na Ctg90 unplaced-scaffold na na JAABNL010000090.1 = NW_025963520.1 Primary Assembly 9277 na Ctg91 unplaced-scaffold na na JAABNL010000091.1 = NW_025963521.1 Primary Assembly 9000 na Ctg92 unplaced-scaffold na na JAABNL010000092.1 = NW_025963522.1 Primary Assembly 8829 na Ctg93 unplaced-scaffold na na JAABNL010000093.1 = NW_025963523.1 Primary Assembly 8573 na Ctg94 unplaced-scaffold na na JAABNL010000094.1 = NW_025963524.1 Primary Assembly 8338 na Ctg95 unplaced-scaffold na na JAABNL010000095.1 = NW_025963525.1 Primary Assembly 8269 na Ctg96 unplaced-scaffold na na JAABNL010000096.1 = NW_025963526.1 Primary Assembly 8000 na Ctg97 unplaced-scaffold na na JAABNL010000097.1 = NW_025963527.1 Primary Assembly 7709 na Ctg98 unplaced-scaffold na na JAABNL010000098.1 = NW_025963528.1 Primary Assembly 7560 na Ctg99 unplaced-scaffold na na JAABNL010000099.1 = NW_025963529.1 Primary Assembly 7267 na Ctg100 unplaced-scaffold na na JAABNL010000100.1 = NW_025963400.1 Primary Assembly 7084 na Ctg101 unplaced-scaffold na na JAABNL010000101.1 = NW_025963401.1 Primary Assembly 6861 na Ctg102 unplaced-scaffold na na JAABNL010000102.1 = NW_025963402.1 Primary Assembly 6358 na Ctg103 unplaced-scaffold na na JAABNL010000103.1 = NW_025963403.1 Primary Assembly 5471 na Ctg104 unplaced-scaffold na na JAABNL010000104.1 = NW_025963404.1 Primary Assembly 5261 na Ctg105 unplaced-scaffold na na JAABNL010000105.1 = NW_025963405.1 Primary Assembly 5035 na Ctg106 unplaced-scaffold na na JAABNL010000106.1 = NW_025963406.1 Primary Assembly 4674 na Ctg107 unplaced-scaffold na na JAABNL010000107.1 = NW_025963407.1 Primary Assembly 4409 na Ctg108 unplaced-scaffold na na JAABNL010000108.1 = NW_025963408.1 Primary Assembly 4301 na Ctg109 unplaced-scaffold na na JAABNL010000109.1 = NW_025963409.1 Primary Assembly 4118 na Ctg110 unplaced-scaffold na na JAABNL010000110.1 = NW_025963411.1 Primary Assembly 4000 na Ctg111 unplaced-scaffold na na JAABNL010000111.1 = NW_025963412.1 Primary Assembly 4000 na Ctg112 unplaced-scaffold na na JAABNL010000112.1 = NW_025963413.1 Primary Assembly 3863 na Ctg113 unplaced-scaffold na na JAABNL010000113.1 = NW_025963414.1 Primary Assembly 3828 na Ctg114 unplaced-scaffold na na JAABNL010000114.1 = NW_025963415.1 Primary Assembly 3766 na Ctg115 unplaced-scaffold na na JAABNL010000115.1 = NW_025963416.1 Primary Assembly 3653 na Ctg116 unplaced-scaffold na na JAABNL010000116.1 = NW_025963417.1 Primary Assembly 3500 na Ctg117 unplaced-scaffold na na JAABNL010000117.1 = NW_025963418.1 Primary Assembly 3492 na Ctg118 unplaced-scaffold na na JAABNL010000118.1 = NW_025963419.1 Primary Assembly 3282 na Ctg119 unplaced-scaffold na na JAABNL010000119.1 = NW_025963420.1 Primary Assembly 3234 na Ctg120 unplaced-scaffold na na JAABNL010000120.1 = NW_025963421.1 Primary Assembly 3000 na Ctg121 unplaced-scaffold na na JAABNL010000121.1 = NW_025963422.1 Primary Assembly 3000 na Ctg122 unplaced-scaffold na na JAABNL010000122.1 = NW_025963423.1 Primary Assembly 2823 na Ctg123 unplaced-scaffold na na JAABNL010000123.1 = NW_025963424.1 Primary Assembly 2680 na Ctg124 unplaced-scaffold na na JAABNL010000124.1 = NW_025963425.1 Primary Assembly 2496 na Ctg125 unplaced-scaffold na na JAABNL010000125.1 = NW_025963426.1 Primary Assembly 2233 na Ctg126 unplaced-scaffold na na JAABNL010000126.1 = NW_025963427.1 Primary Assembly 2172 na Ctg127 unplaced-scaffold na na JAABNL010000127.1 = NW_025963428.1 Primary Assembly 2000 na Ctg128 unplaced-scaffold na na JAABNL010000128.1 = NW_025963429.1 Primary Assembly 2000 na Ctg129 unplaced-scaffold na na JAABNL010000129.1 = NW_025963430.1 Primary Assembly 1882 na Ctg130 unplaced-scaffold na na JAABNL010000130.1 = NW_025963432.1 Primary Assembly 1778 na Ctg131 unplaced-scaffold na na JAABNL010000131.1 = NW_025963433.1 Primary Assembly 1673 na Ctg132 unplaced-scaffold na na JAABNL010000132.1 = NW_025963434.1 Primary Assembly 1611 na Ctg133 unplaced-scaffold na na JAABNL010000133.1 = NW_025963435.1 Primary Assembly 1508 na Ctg134 unplaced-scaffold na na JAABNL010000134.1 = NW_025963436.1 Primary Assembly 1427 na Ctg135 unplaced-scaffold na na JAABNL010000135.1 = NW_025963437.1 Primary Assembly 1407 na Ctg136 unplaced-scaffold na na JAABNL010000136.1 = NW_025963438.1 Primary Assembly 1367 na Ctg137 unplaced-scaffold na na JAABNL010000137.1 = NW_025963439.1 Primary Assembly 1166 na Ctg138 unplaced-scaffold na na JAABNL010000138.1 = NW_025963440.1 Primary Assembly 1142 na Ctg139 unplaced-scaffold na na JAABNL010000139.1 = NW_025963441.1 Primary Assembly 1085 na Ctg140 unplaced-scaffold na na JAABNL010000140.1 = NW_025963442.1 Primary Assembly 1038 na Ctg141 unplaced-scaffold na na JAABNL010000141.1 = NW_025963443.1 Primary Assembly 1011 na Ctg142 unplaced-scaffold na na JAABNL010000142.1 = NW_025963444.1 Primary Assembly 1000 na Ctg143 unplaced-scaffold na na JAABNL010000143.1 = NW_025963445.1 Primary Assembly 1000 na Ctg144 unplaced-scaffold na na JAABNL010000144.1 = NW_025963446.1 Primary Assembly 1000 na Ctg145 unplaced-scaffold na na JAABNL010000145.1 = NW_025963447.1 Primary Assembly 1000 na Ctg146 unplaced-scaffold na na JAABNL010000146.1 = NW_025963448.1 Primary Assembly 1000 na Ctg12 unlocalized-scaffold MT Mitochondrial Miscellaneous JAABNL010000012.1 <> na non-nuclear 250000 na Ctg14 unlocalized-scaffold MT Mitochondrial Miscellaneous JAABNL010000014.1 <> na non-nuclear 130733 na Ctg37 unlocalized-scaffold MT Mitochondrial Miscellaneous JAABNL010000037.1 <> na non-nuclear 50000 na Ctg65 unlocalized-scaffold MT Mitochondrial Miscellaneous JAABNL010000065.1 <> na non-nuclear 23688 na Ctg67 unlocalized-scaffold MT Mitochondrial Miscellaneous JAABNL010000067.1 <> na non-nuclear 21858 na Ctg73 unlocalized-scaffold MT Mitochondrial Miscellaneous JAABNL010000073.1 <> na non-nuclear 17186 na