# Assembly name: ASM1988058v1 # Organism name: Sphingomonas colocasiae (a-proteobacteria) # Infraspecific name: strain=JCM 31229 # Taxid: 1848973 # BioSample: SAMN21032053 # BioProject: PRJNA758629 # Submitter: Life sciences Institute # Date: 2021-09-05 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAINVV01 # Assembly method: SOAPdenovo v. 2.0 # Expected final version: yes # Genome coverage: 85.0x # Sequencing technology: Illumina PE150 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_019880585.1 # RefSeq assembly accession: GCF_019880585.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_019880605.1 GCF_019880605.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na JAINVV010000001.1 = NZ_JAINVV010000001.1 Primary Assembly 659267 na Scaffold1_2 unplaced-scaffold na na JAINVV010000002.1 = NZ_JAINVV010000002.1 Primary Assembly 127405 na Scaffold1_3 unplaced-scaffold na na JAINVV010000003.1 = NZ_JAINVV010000003.1 Primary Assembly 622686 na Scaffold2_1 unplaced-scaffold na na JAINVV010000004.1 = NZ_JAINVV010000004.1 Primary Assembly 1376521 na Scaffold3_1 unplaced-scaffold na na JAINVV010000005.1 = NZ_JAINVV010000005.1 Primary Assembly 144535 na Scaffold3_2 unplaced-scaffold na na JAINVV010000006.1 = NZ_JAINVV010000006.1 Primary Assembly 359143 na Scaffold3_3 unplaced-scaffold na na JAINVV010000007.1 = NZ_JAINVV010000007.1 Primary Assembly 196821 na Scaffold4_1 unplaced-scaffold na na JAINVV010000008.1 = NZ_JAINVV010000008.1 Primary Assembly 674053 na Scaffold5_1 unplaced-scaffold na na JAINVV010000009.1 = NZ_JAINVV010000009.1 Primary Assembly 479755 na Scaffold5_2 unplaced-scaffold na na JAINVV010000010.1 = NZ_JAINVV010000010.1 Primary Assembly 142239 na Scaffold6_1 unplaced-scaffold na na JAINVV010000011.1 = NZ_JAINVV010000011.1 Primary Assembly 490641 na Scaffold7_1 unplaced-scaffold na na JAINVV010000012.1 = NZ_JAINVV010000012.1 Primary Assembly 339818 na Scaffold8_1 unplaced-scaffold na na JAINVV010000013.1 = NZ_JAINVV010000013.1 Primary Assembly 303733 na Scaffold9_1 unplaced-scaffold na na JAINVV010000014.1 = NZ_JAINVV010000014.1 Primary Assembly 227310 na Scaffold10_1 unplaced-scaffold na na JAINVV010000015.1 = NZ_JAINVV010000015.1 Primary Assembly 190490 na Scaffold11_1 unplaced-scaffold na na JAINVV010000016.1 = NZ_JAINVV010000016.1 Primary Assembly 83243 na Scaffold12_1 unplaced-scaffold na na JAINVV010000017.1 = NZ_JAINVV010000017.1 Primary Assembly 61027 na Scaffold13_1 unplaced-scaffold na na JAINVV010000018.1 = NZ_JAINVV010000018.1 Primary Assembly 49080 na Scaffold14_1 unplaced-scaffold na na JAINVV010000019.1 = NZ_JAINVV010000019.1 Primary Assembly 30269 na Scaffold15_1 unplaced-scaffold na na JAINVV010000020.1 = NZ_JAINVV010000020.1 Primary Assembly 5578 na Scaffold16_1 unplaced-scaffold na na JAINVV010000021.1 = NZ_JAINVV010000021.1 Primary Assembly 3707 na Scaffold17_1 unplaced-scaffold na na JAINVV010000022.1 = NZ_JAINVV010000022.1 Primary Assembly 1345 na Scaffold18_1 unplaced-scaffold na na JAINVV010000023.1 = NZ_JAINVV010000023.1 Primary Assembly 1243 na